RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TOP1P11387 765 aaKnown RBP18.45■□□□□ 0.54
MCF2L-232ENST00000535094 IP6K1Q92551 441 aa18.45■□□□□ 0.54
MCF2L-232ENST00000535094 DDX41Q9UJV9 622 aaKnown RBP18.45■□□□□ 0.54
MCF2L-232ENST00000535094 GNG11P61952 73 aa18.44■□□□□ 0.54
MCF2L-232ENST00000535094 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
MCF2L-232ENST00000535094 NSUN7Q8NE18 718 aaKnown RBP18.44■□□□□ 0.54
MCF2L-232ENST00000535094 CLIC4Q9Y696 253 aa18.44■□□□□ 0.54
MCF2L-232ENST00000535094 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-232ENST00000535094 GCKRQ14397 625 aa18.44■□□□□ 0.54
MCF2L-232ENST00000535094 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
MCF2L-232ENST00000535094 PAG1Q9NWQ8 432 aa18.44■□□□□ 0.54
MCF2L-232ENST00000535094 HMGB1P09429 215 aaKnown RBP18.43■□□□□ 0.54
MCF2L-232ENST00000535094 KLHL10Q6JEL2 608 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 CPLX2Q6PUV4 134 aaKnown RBP18.43■□□□□ 0.54
MCF2L-232ENST00000535094 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 MRFAP1L1Q96HT8 127 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 CARD6Q9BX69 1037 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 CEP170BQ9Y4F5 1589 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-232ENST00000535094 AMOTQ4VCS5 1084 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 EPC1Q9H2F5 836 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 TMEM2Q9UHN6 1383 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 TMEM131LA2VDJ0 1609 aa18.43■□□□□ 0.54
MCF2L-232ENST00000535094 KIF2AO00139 706 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-232ENST00000535094 DHX16O60231 1041 aaKnown RBP18.42■□□□□ 0.54
MCF2L-232ENST00000535094 IQCB1Q15051 598 aa18.42■□□□□ 0.54
MCF2L-232ENST00000535094 THEMISQ8N1K5 641 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-232ENST00000535094 SYKP43405 635 aa18.42■□□□□ 0.54
MCF2L-232ENST00000535094 NEURL1BA8MQ27 555 aa18.42■□□□□ 0.54
MCF2L-232ENST00000535094 ATP1A3P13637 1013 aa18.42■□□□□ 0.54
MCF2L-232ENST00000535094 KARSQ15046 597 aaKnown RBP18.42■□□□□ 0.54
MCF2L-232ENST00000535094 IMMTQ16891 758 aaKnown RBP18.42■□□□□ 0.54
MCF2L-232ENST00000535094 CEP126Q9P2H0 1117 aa18.42■□□□□ 0.54
MCF2L-232ENST00000535094 OVOS2A0A0J9YW53 1432 aa18.42■□□□□ 0.54
MCF2L-232ENST00000535094 OVOS2Q6IE36 1432 aa18.42■□□□□ 0.54
MCF2L-232ENST00000535094 IGKV5-2P06315 115 aa18.41■□□□□ 0.54
MCF2L-232ENST00000535094 GABPB1Q06547 395 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-232ENST00000535094 ZNF202O95125 648 aa18.41■□□□□ 0.54
MCF2L-232ENST00000535094 TIGD1Q96MW7 591 aa18.41■□□□□ 0.54
MCF2L-232ENST00000535094 E7EWF7 191 aa18.41■□□□□ 0.54
MCF2L-232ENST00000535094 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
MCF2L-232ENST00000535094 SEC31AO94979 1220 aaKnown RBP18.4■□□□□ 0.54
MCF2L-232ENST00000535094 FANCCQ00597 558 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 STOX1Q6ZVD7 989 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 KIAA1468Q9P260 1216 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 IDH1O75874 414 aaKnown RBP18.4■□□□□ 0.54
MCF2L-232ENST00000535094 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 SIRT1Q96EB6 747 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-232ENST00000535094 RCOR1Q9UKL0 485 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 PRC1O43663 620 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 HOXB7P09629 217 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 KDRP35968 1356 aa18.4■□□□□ 0.54
MCF2L-232ENST00000535094 ATP5JP18859 108 aa18.39■□□□□ 0.54
MCF2L-232ENST00000535094 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.54
MCF2L-232ENST00000535094 CNNM3Q8NE01 707 aa18.39■□□□□ 0.54
MCF2L-232ENST00000535094 CABP4P57796 275 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 TERF2Q15554 542 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 PPP1R13BQ96KQ4 1090 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 PFKFB2O60825 505 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 GCP02774 474 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
MCF2L-232ENST00000535094 KCNH5Q8NCM2 988 aa18.38■□□□□ 0.53
MCF2L-232ENST00000535094 NEK11Q8NG66 645 aa18.38■□□□□ 0.53
MCF2L-232ENST00000535094 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-232ENST00000535094 PDIA3P30101 505 aaKnown RBP18.38■□□□□ 0.53
MCF2L-232ENST00000535094 GPS2Q13227 327 aa18.38■□□□□ 0.53
MCF2L-232ENST00000535094 DHX40Q8IX18 779 aaKnown RBP18.38■□□□□ 0.53
MCF2L-232ENST00000535094 MTX1Q13505 466 aa18.38■□□□□ 0.53
MCF2L-232ENST00000535094 NAA16Q6N069 864 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-232ENST00000535094 LRRN4CLQ8ND94 238 aa18.38■□□□□ 0.53
MCF2L-232ENST00000535094 KCNG4Q8TDN1 519 aa18.38■□□□□ 0.53
MCF2L-232ENST00000535094 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
MCF2L-232ENST00000535094 CASQ1P31415 396 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 EVCP57679 992 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 CCZ1BP86790 482 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 CCZ1P86791 482 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-232ENST00000535094 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 PHKBQ93100 1093 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 ANKRD26Q9UPS8 1709 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.37■□□□□ 0.537e-7■□□□□ 11.2
MCF2L-232ENST00000535094 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
MCF2L-232ENST00000535094 ZNF213O14771 459 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 MYL10Q9BUA6 226 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-232ENST00000535094 HSPD1P10809 573 aaKnown RBP18.37■□□□□ 0.53
MCF2L-232ENST00000535094 PNOCQ13519 176 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 MCM6Q14566 821 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 CCDC57Q2TAC2 916 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 TAF3Q5VWG9 929 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 ALG1Q9BT22 464 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
MCF2L-232ENST00000535094 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
MCF2L-232ENST00000535094 CLIC6Q96NY7 704 aa18.36■□□□□ 0.53
MCF2L-232ENST00000535094 METTL22Q9BUU2 404 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-232ENST00000535094 LZTFL1Q9NQ48 299 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms