RNA–Protein interactions for RNA: ENST00000534938.6

FCF1-202, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-202ENST00000534938 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
FCF1-202ENST00000534938 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
FCF1-202ENST00000534938 INTS3Q68E01 1043 aaKnown RBP13.07□□□□□ -0.32
FCF1-202ENST00000534938 ZNF609O15014 1411 aa13.06□□□□□ -0.32
FCF1-202ENST00000534938 CHL1O00533 1208 aa13.06□□□□□ -0.32
FCF1-202ENST00000534938 INHBEP58166 350 aa13.06□□□□□ -0.32
FCF1-202ENST00000534938 OTUD7BQ6GQQ9 843 aa13.06□□□□□ -0.32
FCF1-202ENST00000534938 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
FCF1-202ENST00000534938 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
FCF1-202ENST00000534938 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
FCF1-202ENST00000534938 MOB2Q70IA6 237 aa13.05□□□□□ -0.32
FCF1-202ENST00000534938 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
FCF1-202ENST00000534938 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
FCF1-202ENST00000534938 SEC31BQ9NQW1 1179 aa13.05□□□□□ -0.32
FCF1-202ENST00000534938 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
FCF1-202ENST00000534938 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
FCF1-202ENST00000534938 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
FCF1-202ENST00000534938 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
FCF1-202ENST00000534938 PRKG1Q13976 671 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 RALBP1Q15311 655 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 KRT24Q2M2I5 525 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 PRAMEF18Q5VWM3 479 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 SLC10A4Q96EP9 437 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 MYD88Q99836 296 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
FCF1-202ENST00000534938 MYO1BO43795 1136 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
FCF1-202ENST00000534938 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
FCF1-202ENST00000534938 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 NBPF9Q3BBW0 867 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 CCDC146Q8IYE0 955 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 COA1Q9GZY4 146 aa13.03□□□□□ -0.32
FCF1-202ENST00000534938 ANGEL1Q9UNK9 670 aaKnown RBP13.03□□□□□ -0.32
FCF1-202ENST00000534938 SCAF8Q9UPN6 1271 aaKnown RBP13.03□□□□□ -0.32
FCF1-202ENST00000534938 WNT10BO00744 389 aa13.02□□□□□ -0.33
FCF1-202ENST00000534938 KCNJ4P48050 445 aa13.02□□□□□ -0.33
FCF1-202ENST00000534938 STRIP1Q5VSL9 837 aa13.02□□□□□ -0.33
FCF1-202ENST00000534938 GMLQ99445 158 aa13.02□□□□□ -0.33
FCF1-202ENST00000534938 CFHR5Q9BXR6 569 aa13.02□□□□□ -0.33
FCF1-202ENST00000534938 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
FCF1-202ENST00000534938 PDE4DIPQ5VU43 2346 aa13.01□□□□□ -0.33
FCF1-202ENST00000534938 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
FCF1-202ENST00000534938 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
FCF1-202ENST00000534938 SCN9AQ15858 1988 aa13□□□□□ -0.33
FCF1-202ENST00000534938 WDHD1O75717 1129 aaPredicted RBP13□□□□□ -0.33
FCF1-202ENST00000534938 SASH1O94885 1247 aa13□□□□□ -0.33
FCF1-202ENST00000534938 ZBTB48P10074 688 aaPredicted RBP13□□□□□ -0.33
FCF1-202ENST00000534938 CTSWP56202 376 aa13□□□□□ -0.33
FCF1-202ENST00000534938 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
FCF1-202ENST00000534938 DLGAP5Q15398 846 aa13□□□□□ -0.33
FCF1-202ENST00000534938 HABP4Q5JVS0 413 aaKnown RBP13□□□□□ -0.33
FCF1-202ENST00000534938 SPRYD7Q5W111 196 aa13□□□□□ -0.33
FCF1-202ENST00000534938 TTLL5Q6EMB2 1281 aa13□□□□□ -0.33
FCF1-202ENST00000534938 MPHOSPH8Q99549 860 aa13□□□□□ -0.33
FCF1-202ENST00000534938 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
FCF1-202ENST00000534938 COL1A1P02452 1464 aaPredicted RBP12.99□□□□□ -0.33
FCF1-202ENST00000534938 ABCB7O75027 752 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
FCF1-202ENST00000534938 SUPT20HL1Q3ZLR7 823 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 DACT2Q5SW24 774 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 ANKRD2Q9GZV1 360 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 PPP2R3BQ9Y5P8 575 aa12.99□□□□□ -0.33
FCF1-202ENST00000534938 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
FCF1-202ENST00000534938 PSME4Q14997 1843 aa12.98□□□□□ -0.33
FCF1-202ENST00000534938 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
FCF1-202ENST00000534938 GNAI1P63096 354 aa12.98□□□□□ -0.33
FCF1-202ENST00000534938 METTL22Q9BUU2 404 aaPredicted RBP12.98□□□□□ -0.33
FCF1-202ENST00000534938 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
FCF1-202ENST00000534938 PHAXQ9H814 394 aaKnown RBP12.98□□□□□ -0.33
FCF1-202ENST00000534938 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
FCF1-202ENST00000534938 MINPP1Q9UNW1 487 aa12.98□□□□□ -0.33
FCF1-202ENST00000534938 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
FCF1-202ENST00000534938 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
FCF1-202ENST00000534938 OTOP1Q7RTM1 612 aa12.97□□□□□ -0.33
FCF1-202ENST00000534938 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
FCF1-202ENST00000534938 DEFB129Q9H1M3 183 aa12.97□□□□□ -0.33
FCF1-202ENST00000534938 EFCC1Q9HA90 598 aa12.97□□□□□ -0.33
FCF1-202ENST00000534938 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
FCF1-202ENST00000534938 ZNF804BA4D1E1 1349 aa12.96□□□□□ -0.33
FCF1-202ENST00000534938 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
FCF1-202ENST00000534938 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
FCF1-202ENST00000534938 GTF2IP78347 998 aa12.96□□□□□ -0.33
FCF1-202ENST00000534938 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.33
FCF1-202ENST00000534938 MXD3Q9BW11 206 aa12.96□□□□□ -0.33
FCF1-202ENST00000534938 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
FCF1-202ENST00000534938 PTPN22Q9Y2R2 807 aa12.96□□□□□ -0.33
FCF1-202ENST00000534938 SP3Q02447 781 aa12.95□□□□□ -0.34
FCF1-202ENST00000534938 TNFAIP1Q13829 316 aa12.95□□□□□ -0.34
FCF1-202ENST00000534938 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
FCF1-202ENST00000534938 TTLL11Q8NHH1 800 aa12.95□□□□□ -0.34
FCF1-202ENST00000534938 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms