RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 BCL2L13Q9BXK5 485 aa9.37□□□□□ -0.91
GEN1-207ENST00000534669 VPS33BQ9H267 617 aa9.37□□□□□ -0.91
GEN1-207ENST00000534669 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
GEN1-207ENST00000534669 RTL9Q8NET4 1388 aa9.37□□□□□ -0.91
GEN1-207ENST00000534669 CDHR2Q9BYE9 1310 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 MAPK8IP3Q9UPT6 1336 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 PSME4Q14997 1843 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 FAM155AB1AL88 458 aaPredicted RBP9.36□□□□□ -0.91
GEN1-207ENST00000534669 ADM5C9JUS6 153 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 PSMD14O00487 310 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 BBOX1O75936 387 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 PDE4AP27815 886 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 BRPF1P55201 1214 aaPredicted RBP9.36□□□□□ -0.91
GEN1-207ENST00000534669 RIPK4P57078 832 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 GPSM2P81274 684 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 MLLT1Q03111 559 aaPredicted RBP9.36□□□□□ -0.91
GEN1-207ENST00000534669 TCIRG1Q13488 830 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 TBC1D10BQ4KMP7 808 aaPredicted RBP9.36□□□□□ -0.91
GEN1-207ENST00000534669 ZNF687Q8N1G0 1237 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 HHIPL1Q96JK4 782 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 BEGAINQ9BUH8 593 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
GEN1-207ENST00000534669 TRMT112Q9UI30 125 aaKnown RBP9.36□□□□□ -0.91
GEN1-207ENST00000534669 ZNF646O15015 1829 aaPredicted RBP9.35□□□□□ -0.91
GEN1-207ENST00000534669 SH3TC1Q8TE82 1336 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 AKAP11Q9UKA4 1901 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 NUDT7P0C024 238 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 TMPOP42166 694 aaKnown RBP9.35□□□□□ -0.91
GEN1-207ENST00000534669 DGKZQ13574 1117 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 PDE4DIPQ5VU43 2346 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 DDX46Q7L014 1031 aaKnown RBP9.35□□□□□ -0.91
GEN1-207ENST00000534669 CDC37L1Q7L3B6 337 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 ZC3H15Q8WU90 426 aaKnown RBP9.35□□□□□ -0.91
GEN1-207ENST00000534669 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 POLLQ9UGP5 575 aa9.35□□□□□ -0.91
GEN1-207ENST00000534669 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 NEFMP07197 916 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 HUNKP57058 714 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 TNIP1Q15025 636 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 RTL5Q5HYW3 569 aaPredicted RBP9.34□□□□□ -0.91
GEN1-207ENST00000534669 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 CCDC146Q8IYE0 955 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 FAM89AQ96GI7 184 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 CFAP44Q96MT7 982 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
GEN1-207ENST00000534669 TMX4Q9H1E5 349 aaPredicted RBP9.34□□□□□ -0.91
GEN1-207ENST00000534669 ECE2O60344 883 aa9.33□□□□□ -0.92
GEN1-207ENST00000534669 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
GEN1-207ENST00000534669 HSP90AB3PQ58FF7 597 aa9.33□□□□□ -0.92
GEN1-207ENST00000534669 RBM26Q5T8P6 1007 aaKnown RBP9.33□□□□□ -0.92
GEN1-207ENST00000534669 NSFL1CQ9UNZ2 370 aaKnown RBP9.33□□□□□ -0.92
GEN1-207ENST00000534669 H7C1D1 291 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 CHL1O00533 1208 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 CA12O43570 354 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 TBC1D12O60347 775 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 KIF23Q02241 960 aaPredicted RBP9.32□□□□□ -0.92
GEN1-207ENST00000534669 NOGQ13253 232 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 SF3B3Q15393 1217 aaKnown RBP9.32□□□□□ -0.92
GEN1-207ENST00000534669 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 RGMBQ6NW40 437 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 KRT26Q7Z3Y9 468 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 TBC1D16Q8TBP0 767 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 DPF2Q92785 391 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 GBA2Q9HCG7 927 aaPredicted RBP9.32□□□□□ -0.92
GEN1-207ENST00000534669 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
GEN1-207ENST00000534669 SCAF8Q9UPN6 1271 aaKnown RBP9.32□□□□□ -0.92
GEN1-207ENST00000534669 WTIPA6NIX2 430 aaPredicted RBP9.31□□□□□ -0.92
GEN1-207ENST00000534669 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
GEN1-207ENST00000534669 SOX10P56693 466 aa9.31□□□□□ -0.92
GEN1-207ENST00000534669 PLBD2Q8NHP8 589 aa9.31□□□□□ -0.92
GEN1-207ENST00000534669 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
GEN1-207ENST00000534669 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
GEN1-207ENST00000534669 RNF186Q9NXI6 227 aa9.31□□□□□ -0.92
GEN1-207ENST00000534669 GGA3Q9NZ52 723 aa9.31□□□□□ -0.92
GEN1-207ENST00000534669 LAS1LQ9Y4W2 734 aaKnown RBP9.31□□□□□ -0.92
GEN1-207ENST00000534669 SLC10A3P09131 477 aa9.3□□□□□ -0.92
GEN1-207ENST00000534669 KIF4BQ2VIQ3 1234 aa9.3□□□□□ -0.92
GEN1-207ENST00000534669 HDGFL1Q5TGJ6 251 aa9.3□□□□□ -0.92
GEN1-207ENST00000534669 MOB2Q70IA6 237 aa9.3□□□□□ -0.92
GEN1-207ENST00000534669 CDCA5Q96FF9 252 aa9.3□□□□□ -0.92
GEN1-207ENST00000534669 CSRNP1Q96S65 589 aa9.3□□□□□ -0.92
GEN1-207ENST00000534669 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
GEN1-207ENST00000534669 IRS4O14654 1257 aaPredicted RBP9.29□□□□□ -0.92
GEN1-207ENST00000534669 TRPA1O75762 1119 aa9.29□□□□□ -0.92
GEN1-207ENST00000534669 VIL1P09327 827 aaKnown RBP9.29□□□□□ -0.92
GEN1-207ENST00000534669 ZNF157P51786 506 aaPredicted RBP9.29□□□□□ -0.92
GEN1-207ENST00000534669 MFSD10Q14728 455 aa9.29□□□□□ -0.92
GEN1-207ENST00000534669 ANKRD13DQ6ZTN6 518 aa9.29□□□□□ -0.92
GEN1-207ENST00000534669 TMC4Q7Z404 712 aa9.29□□□□□ -0.92
GEN1-207ENST00000534669 RASAL3Q86YV0 1011 aa9.29□□□□□ -0.92
GEN1-207ENST00000534669 OXER1Q8TDS5 423 aa9.29□□□□□ -0.92
GEN1-207ENST00000534669 CCDC85AQ96PX6 553 aaPredicted RBP9.29□□□□□ -0.92
GEN1-207ENST00000534669 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
GEN1-207ENST00000534669 PHAXQ9H814 394 aaKnown RBP9.29□□□□□ -0.92
GEN1-207ENST00000534669 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
GEN1-207ENST00000534669 PAPPA2Q9BXP8 1791 aa9.29□□□□□ -0.92
GEN1-207ENST00000534669 UFL1O94874 794 aa9.28□□□□□ -0.92
GEN1-207ENST00000534669 RPS12P25398 132 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms