RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 POLR3GO15318 223 aaPredicted RBP22.38■■□□□ 1.17
SMPD1-210ENST00000534405 F13A1P00488 732 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 CREB3L3Q68CJ9 461 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 IQUBQ8NA54 791 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 MAP4K1Q92918 833 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 CYP46A1Q9Y6A2 500 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 KIF1AQ12756 1690 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 ATP8B1O43520 1251 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 PRR29P0C7W0 189 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 GJB2P29033 226 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
SMPD1-210ENST00000534405 C19orf44Q9H6X5 657 aa22.38■■□□□ 1.17
SMPD1-210ENST00000534405 MAP3K11Q16584 847 aa22.37■■□□□ 1.17
SMPD1-210ENST00000534405 ME3Q16798 604 aa22.37■■□□□ 1.17
SMPD1-210ENST00000534405 TATP17735 454 aaPredicted RBP22.37■■□□□ 1.17
SMPD1-210ENST00000534405 KCNG1Q9UIX4 513 aa22.37■■□□□ 1.17
SMPD1-210ENST00000534405 TAF6LQ9Y6J9 622 aa22.37■■□□□ 1.17
SMPD1-210ENST00000534405 NEXNQ0ZGT2 675 aa22.36■■□□□ 1.17
SMPD1-210ENST00000534405 TSGA10IPQ3SY00 556 aa22.36■■□□□ 1.17
SMPD1-210ENST00000534405 EDC3Q96F86 508 aaKnown RBP22.36■■□□□ 1.17
SMPD1-210ENST00000534405 NECAB1Q8N987 351 aa22.36■■□□□ 1.17
SMPD1-210ENST00000534405 CABLES1Q8TDN4 633 aa22.36■■□□□ 1.17
SMPD1-210ENST00000534405 SNRKQ9NRH2 765 aa22.36■■□□□ 1.17
SMPD1-210ENST00000534405 SLC27A2O14975 620 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 NPHP1O15259 732 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 CT47A1Q5JQC4 288 aaPredicted RBP22.35■■□□□ 1.17
SMPD1-210ENST00000534405 TMCO3Q6UWJ1 677 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 FSD1Q9BTV5 496 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 PSD3Q9NYI0 1048 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 MTMR6Q9Y217 621 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 MRC1P22897 1456 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 CCDC93Q567U6 631 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 NOM1Q5C9Z4 860 aaKnown RBP22.35■■□□□ 1.17
SMPD1-210ENST00000534405 FILIP1Q7Z7B0 1213 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 ARGLU1Q9NWB6 273 aaPredicted RBP22.35■■□□□ 1.17
SMPD1-210ENST00000534405 TPCN1Q9ULQ1 816 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 CEP83Q9Y592 693 aa22.35■■□□□ 1.17
SMPD1-210ENST00000534405 CYP27B1O15528 508 aa22.34■■□□□ 1.17
SMPD1-210ENST00000534405 ZKSCAN1P17029 563 aaPredicted RBP22.34■■□□□ 1.17
SMPD1-210ENST00000534405 ZNF589Q86UQ0 364 aaPredicted RBP22.34■■□□□ 1.17
SMPD1-210ENST00000534405 CCAR2Q8N163 923 aaKnown RBP22.34■■□□□ 1.17
SMPD1-210ENST00000534405 HIP1O00291 1037 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 CCDC172P0C7W6 258 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 ANKRD13DQ6ZTN6 518 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 ZSCAN31Q96LW9 406 aaPredicted RBP22.33■■□□□ 1.17
SMPD1-210ENST00000534405 MED23Q9ULK4 1368 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 COL18A1P39060 1754 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 ATP2B1P20020 1258 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 RFX5P48382 616 aaPredicted RBP22.33■■□□□ 1.17
SMPD1-210ENST00000534405 CHRNA2Q15822 529 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 TTC31Q49AM3 519 aaPredicted RBP22.33■■□□□ 1.17
SMPD1-210ENST00000534405 ANO6Q4KMQ2 910 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 IFNL2Q8IZJ0 200 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 TCEANC2Q96MN5 208 aa22.33■■□□□ 1.17
SMPD1-210ENST00000534405 SH2B1Q9NRF2 756 aaPredicted RBP22.33■■□□□ 1.17
SMPD1-210ENST00000534405 NUP62CLQ9H1M0 184 aa22.32■■□□□ 1.16
SMPD1-210ENST00000534405 SKILP12757 684 aa22.32■■□□□ 1.16
SMPD1-210ENST00000534405 DNM1Q05193 864 aaKnown RBP22.32■■□□□ 1.16
SMPD1-210ENST00000534405 ARHGAP29Q52LW3 1261 aa22.32■■□□□ 1.16
SMPD1-210ENST00000534405 BANK1Q8NDB2 785 aa22.32■■□□□ 1.16
SMPD1-210ENST00000534405 CSB-PGBD3P0DP91 1061 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 MAGEA9P43362 315 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 AK7Q96M32 723 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 DBNLQ9UJU6 430 aaKnown RBP22.31■■□□□ 1.16
SMPD1-210ENST00000534405 SNRPA1P09661 255 aaKnown RBP22.31■■□□□ 1.16
SMPD1-210ENST00000534405 PTPN12Q05209 780 aaKnown RBP22.31■■□□□ 1.16
SMPD1-210ENST00000534405 PACS2Q86VP3 889 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 REXO1L1PQ8IX06 675 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 COPRSQ9NQ92 184 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 TOMM22Q9NS69 142 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.31■■□□□ 1.16
SMPD1-210ENST00000534405 NDUFB9Q9Y6M9 179 aa22.31■■□□□ 1.16
SMPD1-210ENST00000534405 OAS2P29728 719 aaKnown RBP22.3■■□□□ 1.16
SMPD1-210ENST00000534405 UBE3BQ7Z3V4 1068 aa22.3■■□□□ 1.16
SMPD1-210ENST00000534405 EXOC4Q96A65 974 aa22.3■■□□□ 1.16
SMPD1-210ENST00000534405 CHGBP05060 677 aa22.3■■□□□ 1.16
SMPD1-210ENST00000534405 COL15A1P39059 1388 aa22.3■■□□□ 1.16
SMPD1-210ENST00000534405 ATP5J2-PTCD1G3V325 749 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 PTCD1O75127 700 aaKnown RBP22.29■■□□□ 1.16
SMPD1-210ENST00000534405 CCZ1BP86790 482 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 CCZ1P86791 482 aaPredicted RBP22.29■■□□□ 1.16
SMPD1-210ENST00000534405 TFCP2Q12800 502 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 TTC5Q8N0Z6 440 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 DRC1Q96MC2 740 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 SARM1Q6SZW1 724 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 LRRN4CLQ8ND94 238 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 DCAF5Q96JK2 942 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 JCADQ9P266 1359 aa22.29■■□□□ 1.16
SMPD1-210ENST00000534405 VPS37CA5D8V6 355 aaPredicted RBP22.28■■□□□ 1.16
SMPD1-210ENST00000534405 RBM43Q6ZSC3 357 aaKnown RBP22.28■■□□□ 1.16
SMPD1-210ENST00000534405 MRFAP1L1Q96HT8 127 aa22.28■■□□□ 1.16
SMPD1-210ENST00000534405 ORC3Q9UBD5 711 aaPredicted RBP22.28■■□□□ 1.16
SMPD1-210ENST00000534405 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.28■■□□□ 1.16
SMPD1-210ENST00000534405 TNNI3KQ59H18 835 aa22.28■■□□□ 1.16
SMPD1-210ENST00000534405 TRMT1Q9NXH9 659 aaKnown RBP22.28■■□□□ 1.16
SMPD1-210ENST00000534405 FPGT-TNNI3KV9GXZ4 949 aa22.28■■□□□ 1.16
SMPD1-210ENST00000534405 ARID5BQ14865 1188 aa22.27■■□□□ 1.16
SMPD1-210ENST00000534405 RABL6Q3YEC7 729 aaPredicted RBP22.27■■□□□ 1.16
SMPD1-210ENST00000534405 GPATCH11Q8N954 259 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms