RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 GPR108Q9NPR9 543 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 GYG1P46976 350 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 COL5A3P25940 1745 aaPredicted RBP11.48□□□□□ -0.57
RTL1-201ENST00000534062 HIP1O00291 1037 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 CHGBP05060 677 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 SLFNL1Q499Z3 407 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 CAVIN4Q5BKX8 364 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 WTIPA6NIX2 430 aaPredicted RBP11.48□□□□□ -0.57
RTL1-201ENST00000534062 SCARF1Q14162 830 aa11.48□□□□□ -0.57
RTL1-201ENST00000534062 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 ANP32BQ92688 251 aaKnown RBP11.47□□□□□ -0.57
RTL1-201ENST00000534062 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 HAUS7Q99871 368 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 MINPP1Q9UNW1 487 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 PNPLA7Q6ZV29 1317 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 G3V3G9 751 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 CCDC129Q6ZRS4 1044 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 RBM17Q96I25 401 aaKnown RBP11.47□□□□□ -0.57
RTL1-201ENST00000534062 CAMKK2Q96RR4 588 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 SEC62Q99442 399 aaKnown RBP11.47□□□□□ -0.57
RTL1-201ENST00000534062 GNL3LQ9NVN8 582 aaKnown RBP11.47□□□□□ -0.57
RTL1-201ENST00000534062 BSDC1Q9NW68 430 aaPredicted RBP11.47□□□□□ -0.57
RTL1-201ENST00000534062 ANKRD36CQ5JPF3 1778 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 ZNF609O15014 1411 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
RTL1-201ENST00000534062 GPR101Q96P66 508 aaPredicted RBP11.47□□□□□ -0.57
RTL1-201ENST00000534062 USP26Q9BXU7 913 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 PRDM10Q9NQV6 1147 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 LRP2BPQ9P2M1 347 aa11.47□□□□□ -0.57
RTL1-201ENST00000534062 A0A0D9SFI3 127 aa11.46□□□□□ -0.57
RTL1-201ENST00000534062 POLRMTO00411 1230 aaKnown RBP11.46□□□□□ -0.57
RTL1-201ENST00000534062 PDGFDQ9GZP0 370 aaPredicted RBP11.46□□□□□ -0.57
RTL1-201ENST00000534062 IL25Q9H293 177 aa11.46□□□□□ -0.57
RTL1-201ENST00000534062 APPP05067 770 aa11.46□□□□□ -0.58
RTL1-201ENST00000534062 LRRFIP1Q32MZ4 808 aaKnown RBP11.46□□□□□ -0.58
RTL1-201ENST00000534062 KBTBD3Q8NAB2 608 aa11.46□□□□□ -0.58
RTL1-201ENST00000534062 LY75O60449 1722 aa11.46□□□□□ -0.58
RTL1-201ENST00000534062 SGSM2O43147 1006 aa11.46□□□□□ -0.58
RTL1-201ENST00000534062 UQCRFS1P1P0C7P4 283 aa11.46□□□□□ -0.58
RTL1-201ENST00000534062 SLC51AQ86UW1 340 aa11.46□□□□□ -0.58
RTL1-201ENST00000534062 TM4SF1P30408 202 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 MCAMP43121 646 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 GRAPQ13588 217 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 PRPF40BQ6NWY9 871 aaKnown RBP11.45□□□□□ -0.58
RTL1-201ENST00000534062 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
RTL1-201ENST00000534062 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
RTL1-201ENST00000534062 ARID3AQ99856 593 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.45□□□□□ -0.58
RTL1-201ENST00000534062 RAI14Q9P0K7 980 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 ZBTB7AO95365 584 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 UPF3BQ9BZI7 483 aaKnown RBP11.45□□□□□ -0.58
RTL1-201ENST00000534062 RIC1Q4ADV7 1423 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 TAF1LQ8IZX4 1826 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 UFL1O94874 794 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 SLC9C2Q5TAH2 1124 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
RTL1-201ENST00000534062 RGL2O15211 777 aa11.44□□□□□ -0.58
RTL1-201ENST00000534062 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
RTL1-201ENST00000534062 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
RTL1-201ENST00000534062 NEK4P51957 841 aa11.44□□□□□ -0.58
RTL1-201ENST00000534062 VGLL2Q8N8G2 317 aa11.44□□□□□ -0.58
RTL1-201ENST00000534062 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
RTL1-201ENST00000534062 FAM13BQ9NYF5 915 aa11.44□□□□□ -0.58
RTL1-201ENST00000534062 MYH3P11055 1940 aa11.44□□□□□ -0.58
RTL1-201ENST00000534062 RASGRF1Q13972 1273 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 C2CD5Q86YS7 1000 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 ZNF804BA4D1E1 1349 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
RTL1-201ENST00000534062 KLRK1P26718 216 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 PTH1RQ03431 593 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 PDE6BP35913 854 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 MRE11P49959 708 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 ZNF589Q86UQ0 364 aaPredicted RBP11.43□□□□□ -0.58
RTL1-201ENST00000534062 HMG20BQ9P0W2 317 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 TAF1P21675 1872 aa11.43□□□□□ -0.58
RTL1-201ENST00000534062 H0YIN7 160 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 RNF113AO15541 343 aaKnown RBP11.42□□□□□ -0.58
RTL1-201ENST00000534062 ST18O60284 1047 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 HIBADHP31937 336 aaKnown RBP11.42□□□□□ -0.58
RTL1-201ENST00000534062 MAP3K12Q12852 859 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 UBE4AQ14139 1066 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 MCMDC2Q4G0Z9 681 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 CHRNA5P30532 468 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 RBM25P49756 843 aaKnown RBP11.42□□□□□ -0.58
RTL1-201ENST00000534062 TTF1Q15361 905 aaPredicted RBP11.42□□□□□ -0.58
RTL1-201ENST00000534062 PALD1Q9ULE6 856 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 PSDA5PKW4 1024 aaPredicted RBP11.42□□□□□ -0.58
RTL1-201ENST00000534062 OLFM4Q6UX06 510 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 BRIP1Q9BX63 1249 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 TBC1D2Q9BYX2 928 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 GRPEL1Q9HAV7 217 aa11.42□□□□□ -0.58
RTL1-201ENST00000534062 RBM8AQ9Y5S9 174 aaKnown RBP11.42□□□□□ -0.58
RTL1-201ENST00000534062 R3HDM1Q15032 1099 aaKnown RBP11.42□□□□□ -0.58
RTL1-201ENST00000534062 MAGEB6Q8N7X4 407 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms