RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 AKAP11Q9UKA4 1901 aa21.59■■□□□ 1.05
CAPRIN1-216ENST00000534042 IGHMBP2P38935 993 aaKnown RBP21.59■■□□□ 1.05
CAPRIN1-216ENST00000534042 CCT4P50991 539 aaKnown RBP21.59■■□□□ 1.05
CAPRIN1-216ENST00000534042 MCOLN1Q9GZU1 580 aa21.59■■□□□ 1.05
CAPRIN1-216ENST00000534042 PITPNM2Q9BZ72 1349 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 SLC10A3P09131 477 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 FLIIQ13045 1269 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 DGKZQ13574 1117 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 GCKRQ14397 625 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 FBXW7Q969H0 707 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 PLA2G12BQ9BX93 195 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 LEMD3Q9Y2U8 911 aa21.57■■□□□ 1.04
CAPRIN1-216ENST00000534042 FKBP1BP68106 108 aa21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 FKBP5Q13451 457 aaPredicted RBP21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 FAM161AQ3B820 660 aa21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 OGFOD1Q8N543 542 aa21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 COA1Q9GZY4 146 aa21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 SAGE1Q9NXZ1 904 aa21.56■■□□□ 1.04
CAPRIN1-216ENST00000534042 ITGA6P23229 1130 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 DACT2Q5SW24 774 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 STRIP1Q5VSL9 837 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 MPHOSPH8Q99549 860 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 MXD3Q9BW11 206 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 ANKRD2Q9GZV1 360 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 MYO3BQ8WXR4 1341 aa21.55■■□□□ 1.04
CAPRIN1-216ENST00000534042 TRPA1O75762 1119 aa21.54■■□□□ 1.04
CAPRIN1-216ENST00000534042 RNF186Q9NXI6 227 aa21.54■■□□□ 1.04
CAPRIN1-216ENST00000534042 ZNF804BA4D1E1 1349 aa21.54■■□□□ 1.04
CAPRIN1-216ENST00000534042 CASP7P55210 303 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 NBPF9Q3BBW0 867 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 TXNRD3Q86VQ6 643 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 LINS1Q8NG48 757 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 CSRNP1Q96S65 589 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 MRS2Q9HD23 443 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 SCAF8Q9UPN6 1271 aaKnown RBP21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 PAPPA2Q9BXP8 1791 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 FANCIQ9NVI1 1328 aa21.53■■□□□ 1.04
CAPRIN1-216ENST00000534042 CSF1RP07333 972 aa21.52■■□□□ 1.04
CAPRIN1-216ENST00000534042 RGS19P49795 217 aa21.52■■□□□ 1.04
CAPRIN1-216ENST00000534042 RASAL3Q86YV0 1011 aa21.52■■□□□ 1.04
CAPRIN1-216ENST00000534042 REM2Q8IYK8 340 aaPredicted RBP21.52■■□□□ 1.04
CAPRIN1-216ENST00000534042 VAMP4O75379 141 aa21.51■■□□□ 1.03
CAPRIN1-216ENST00000534042 KCNJ4P48050 445 aa21.51■■□□□ 1.03
CAPRIN1-216ENST00000534042 MMP14P50281 582 aa21.51■■□□□ 1.03
CAPRIN1-216ENST00000534042 MLLT1Q03111 559 aaPredicted RBP21.51■■□□□ 1.03
CAPRIN1-216ENST00000534042 TTLL5Q6EMB2 1281 aa21.51■■□□□ 1.03
CAPRIN1-216ENST00000534042 SALL2Q9Y467 1007 aaPredicted RBP21.51■■□□□ 1.03
CAPRIN1-216ENST00000534042 ZNF646O15015 1829 aaPredicted RBP21.5■■□□□ 1.03
CAPRIN1-216ENST00000534042 WNT10BO00744 389 aa21.5■■□□□ 1.03
CAPRIN1-216ENST00000534042 PRAMEF18Q5VWM3 479 aa21.5■■□□□ 1.03
CAPRIN1-216ENST00000534042 MOB2Q70IA6 237 aa21.5■■□□□ 1.03
CAPRIN1-216ENST00000534042 WDR63Q8IWG1 891 aa21.5■■□□□ 1.03
CAPRIN1-216ENST00000534042 ANKRD18BA2A2Z9 1011 aa21.49■■□□□ 1.03
CAPRIN1-216ENST00000534042 KLRK1P26718 216 aa21.49■■□□□ 1.03
CAPRIN1-216ENST00000534042 CHRNDQ07001 517 aa21.49■■□□□ 1.03
CAPRIN1-216ENST00000534042 TTLL12Q14166 644 aaPredicted RBP21.49■■□□□ 1.03
CAPRIN1-216ENST00000534042 HDAC9Q9UKV0 1011 aa21.49■■□□□ 1.03
CAPRIN1-216ENST00000534042 UBE2Q2LH0YL09 131 aa21.48■■□□□ 1.03
CAPRIN1-216ENST00000534042 NF2P35240 595 aa21.48■■□□□ 1.03
CAPRIN1-216ENST00000534042 GTF2IP78347 998 aa21.48■■□□□ 1.03
CAPRIN1-216ENST00000534042 EXOSC9Q06265 439 aaKnown RBP21.48■■□□□ 1.03
CAPRIN1-216ENST00000534042 KIAA0825Q8IV33 1275 aa21.48■■□□□ 1.03
CAPRIN1-216ENST00000534042 SASH1O94885 1247 aa21.47■■□□□ 1.03
CAPRIN1-216ENST00000534042 ANP32CO43423 234 aa21.46■■□□□ 1.03
CAPRIN1-216ENST00000534042 IFIT5Q13325 482 aaKnown RBP21.46■■□□□ 1.03
CAPRIN1-216ENST00000534042 CD209Q9NNX6 404 aa21.46■■□□□ 1.03
CAPRIN1-216ENST00000534042 CHMP3Q9Y3E7 222 aa21.46■■□□□ 1.03
CAPRIN1-216ENST00000534042 F6X3S4 739 aa21.45■■□□□ 1.02
CAPRIN1-216ENST00000534042 APOBEC3FQ8IUX4 373 aaKnown RBP21.45■■□□□ 1.02
CAPRIN1-216ENST00000534042 TAF5LO75529 589 aa21.44■■□□□ 1.02
CAPRIN1-216ENST00000534042 FOXO4P98177 505 aa21.44■■□□□ 1.02
CAPRIN1-216ENST00000534042 BEND3Q5T5X7 828 aa21.44■■□□□ 1.02
CAPRIN1-216ENST00000534042 HELBQ8NG08 1087 aaPredicted RBP21.44■■□□□ 1.02
CAPRIN1-216ENST00000534042 SNAP23O00161 211 aa21.43■■□□□ 1.02
CAPRIN1-216ENST00000534042 C15orf52Q6ZUT6 534 aaKnown RBP21.43■■□□□ 1.02
CAPRIN1-216ENST00000534042 ARMC9Q7Z3E5 817 aa21.43■■□□□ 1.02
CAPRIN1-216ENST00000534042 ZBED3Q96IU2 234 aaPredicted RBP21.43■■□□□ 1.02
CAPRIN1-216ENST00000534042 CTU1Q7Z7A3 348 aaKnown RBP21.42■■□□□ 1.02
CAPRIN1-216ENST00000534042 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
CAPRIN1-216ENST00000534042 DLGAP5Q15398 846 aa21.41■■□□□ 1.02
CAPRIN1-216ENST00000534042 LMBR1LQ6UX01 489 aa21.41■■□□□ 1.02
CAPRIN1-216ENST00000534042 ZNF804AQ7Z570 1209 aa21.41■■□□□ 1.02
CAPRIN1-216ENST00000534042 PTPN12Q05209 780 aaKnown RBP21.4■■□□□ 1.02
CAPRIN1-216ENST00000534042 PRKG1Q13976 671 aa21.4■■□□□ 1.02
CAPRIN1-216ENST00000534042 CCDC57Q2TAC2 916 aa21.4■■□□□ 1.02
CAPRIN1-216ENST00000534042 TAF7LQ5H9L4 462 aa21.4■■□□□ 1.02
CAPRIN1-216ENST00000534042 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
CAPRIN1-216ENST00000534042 A0A1B0GUL6 1792 aa21.39■■□□□ 1.01
CAPRIN1-216ENST00000534042 GRM8O00222 908 aa21.39■■□□□ 1.01
CAPRIN1-216ENST00000534042 TM4SF4P48230 202 aa21.39■■□□□ 1.01
CAPRIN1-216ENST00000534042 MKRN3Q13064 507 aaKnown RBP21.39■■□□□ 1.01
CAPRIN1-216ENST00000534042 EPHA10Q5JZY3 1008 aa21.39■■□□□ 1.01
CAPRIN1-216ENST00000534042 CERS5Q8N5B7 392 aa21.39■■□□□ 1.01
CAPRIN1-216ENST00000534042 C9orf78Q9NZ63 289 aaPredicted RBP21.39■■□□□ 1.01
CAPRIN1-216ENST00000534042 PDE4DIPQ5VU43 2346 aa21.38■■□□□ 1.01
CAPRIN1-216ENST00000534042 PLIN1O60240 522 aa21.38■■□□□ 1.01
CAPRIN1-216ENST00000534042 TBC1D8O95759 1140 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms