RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 CSRNP1Q96S65 589 aa23.18■■□□□ 1.3
UBXN1-216ENST00000533908 STK31Q9BXU1 1019 aa23.18■■□□□ 1.3
UBXN1-216ENST00000533908 RNF186Q9NXI6 227 aa23.18■■□□□ 1.3
UBXN1-216ENST00000533908 CCT4P50991 539 aaKnown RBP23.17■■□□□ 1.3
UBXN1-216ENST00000533908 NEXNQ0ZGT2 675 aa23.17■■□□□ 1.3
UBXN1-216ENST00000533908 DACT2Q5SW24 774 aa23.17■■□□□ 1.3
UBXN1-216ENST00000533908 MOB2Q70IA6 237 aa23.17■■□□□ 1.3
UBXN1-216ENST00000533908 UBE3BQ7Z3V4 1068 aa23.17■■□□□ 1.3
UBXN1-216ENST00000533908 MED23Q9ULK4 1368 aa23.16■■□□□ 1.3
UBXN1-216ENST00000533908 TRPA1O75762 1119 aa23.16■■□□□ 1.3
UBXN1-216ENST00000533908 CASP7P55210 303 aa23.16■■□□□ 1.3
UBXN1-216ENST00000533908 NBPF9Q3BBW0 867 aa23.16■■□□□ 1.3
UBXN1-216ENST00000533908 PRAMEF18Q5VWM3 479 aa23.16■■□□□ 1.3
UBXN1-216ENST00000533908 SPEF2Q9C093 1822 aa23.15■■□□□ 1.3
UBXN1-216ENST00000533908 GCKRQ14397 625 aa23.15■■□□□ 1.3
UBXN1-216ENST00000533908 ZNF646O15015 1829 aaPredicted RBP23.15■■□□□ 1.3
UBXN1-216ENST00000533908 KLRK1P26718 216 aa23.14■■□□□ 1.29
UBXN1-216ENST00000533908 SAGE1Q9NXZ1 904 aa23.14■■□□□ 1.29
UBXN1-216ENST00000533908 MYH3P11055 1940 aa23.14■■□□□ 1.29
UBXN1-216ENST00000533908 PITPNM2Q9BZ72 1349 aa23.13■■□□□ 1.29
UBXN1-216ENST00000533908 RASAL3Q86YV0 1011 aa23.13■■□□□ 1.29
UBXN1-216ENST00000533908 PLA2G12BQ9BX93 195 aa23.13■■□□□ 1.29
UBXN1-216ENST00000533908 CSF1RP07333 972 aa23.12■■□□□ 1.29
UBXN1-216ENST00000533908 ITGA6P23229 1130 aa23.12■■□□□ 1.29
UBXN1-216ENST00000533908 MLLT1Q03111 559 aaPredicted RBP23.12■■□□□ 1.29
UBXN1-216ENST00000533908 FLIIQ13045 1269 aa23.12■■□□□ 1.29
UBXN1-216ENST00000533908 COA1Q9GZY4 146 aa23.12■■□□□ 1.29
UBXN1-216ENST00000533908 IL16Q14005 1332 aa23.11■■□□□ 1.29
UBXN1-216ENST00000533908 UBE2Q2LH0YL09 131 aa23.11■■□□□ 1.29
UBXN1-216ENST00000533908 STRIP1Q5VSL9 837 aa23.11■■□□□ 1.29
UBXN1-216ENST00000533908 LEMD3Q9Y2U8 911 aa23.11■■□□□ 1.29
UBXN1-216ENST00000533908 WNT10BO00744 389 aa23.1■■□□□ 1.29
UBXN1-216ENST00000533908 FKBP1BP68106 108 aa23.1■■□□□ 1.29
UBXN1-216ENST00000533908 DNAAF4Q8WXU2 420 aa23.1■■□□□ 1.29
UBXN1-216ENST00000533908 FBXW7Q969H0 707 aa23.1■■□□□ 1.29
UBXN1-216ENST00000533908 ZNF804BA4D1E1 1349 aa23.09■■□□□ 1.29
UBXN1-216ENST00000533908 SNAP23O00161 211 aa23.09■■□□□ 1.29
UBXN1-216ENST00000533908 VAMP4O75379 141 aa23.09■■□□□ 1.29
UBXN1-216ENST00000533908 IGHMBP2P38935 993 aaKnown RBP23.09■■□□□ 1.29
UBXN1-216ENST00000533908 FANCIQ9NVI1 1328 aa23.08■■□□□ 1.29
UBXN1-216ENST00000533908 FKBP5Q13451 457 aaPredicted RBP23.08■■□□□ 1.29
UBXN1-216ENST00000533908 TTLL5Q6EMB2 1281 aa23.08■■□□□ 1.29
UBXN1-216ENST00000533908 LINS1Q8NG48 757 aa23.08■■□□□ 1.29
UBXN1-216ENST00000533908 PAPPA2Q9BXP8 1791 aa23.08■■□□□ 1.29
UBXN1-216ENST00000533908 SASH1O94885 1247 aa23.07■■□□□ 1.28
UBXN1-216ENST00000533908 NCBP3Q53F19 620 aaKnown RBP23.07■■□□□ 1.28
UBXN1-216ENST00000533908 OGFOD1Q8N543 542 aa23.07■■□□□ 1.28
UBXN1-216ENST00000533908 ANKRD2Q9GZV1 360 aa23.07■■□□□ 1.28
UBXN1-216ENST00000533908 SALL2Q9Y467 1007 aaPredicted RBP23.07■■□□□ 1.28
UBXN1-216ENST00000533908 AKAP11Q9UKA4 1901 aa23.07■■□□□ 1.28
UBXN1-216ENST00000533908 GTF2IP78347 998 aa23.06■■□□□ 1.28
UBXN1-216ENST00000533908 FOXO4P98177 505 aa23.06■■□□□ 1.28
UBXN1-216ENST00000533908 CHRNDQ07001 517 aa23.06■■□□□ 1.28
UBXN1-216ENST00000533908 KIAA0825Q8IV33 1275 aa23.06■■□□□ 1.28
UBXN1-216ENST00000533908 MPHOSPH8Q99549 860 aa23.06■■□□□ 1.28
UBXN1-216ENST00000533908 MYO3BQ8WXR4 1341 aa23.06■■□□□ 1.28
UBXN1-216ENST00000533908 IRS2Q9Y4H2 1338 aa23.06■■□□□ 1.28
UBXN1-216ENST00000533908 EXOSC9Q06265 439 aaKnown RBP23.05■■□□□ 1.28
UBXN1-216ENST00000533908 ZBED3Q96IU2 234 aaPredicted RBP23.05■■□□□ 1.28
UBXN1-216ENST00000533908 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
UBXN1-216ENST00000533908 F6X3S4 739 aa23.04■■□□□ 1.28
UBXN1-216ENST00000533908 TAF5LO75529 589 aa23.04■■□□□ 1.28
UBXN1-216ENST00000533908 REM2Q8IYK8 340 aaPredicted RBP23.04■■□□□ 1.28
UBXN1-216ENST00000533908 HELBQ8NG08 1087 aaPredicted RBP23.04■■□□□ 1.28
UBXN1-216ENST00000533908 CD209Q9NNX6 404 aa23.04■■□□□ 1.28
UBXN1-216ENST00000533908 SPINK5Q9NQ38 1064 aaPredicted RBP23.04■■□□□ 1.28
UBXN1-216ENST00000533908 CERS5Q8N5B7 392 aa23.03■■□□□ 1.28
UBXN1-216ENST00000533908 MRS2Q9HD23 443 aa23.03■■□□□ 1.28
UBXN1-216ENST00000533908 EPHA10Q5JZY3 1008 aa23.02■■□□□ 1.28
UBXN1-216ENST00000533908 BEND3Q5T5X7 828 aa23.02■■□□□ 1.28
UBXN1-216ENST00000533908 WDR63Q8IWG1 891 aa23.02■■□□□ 1.28
UBXN1-216ENST00000533908 ANKRD18BA2A2Z9 1011 aa23.01■■□□□ 1.27
UBXN1-216ENST00000533908 TBC1D8O95759 1140 aa23.01■■□□□ 1.27
UBXN1-216ENST00000533908 PTPN12Q05209 780 aaKnown RBP23.01■■□□□ 1.27
UBXN1-216ENST00000533908 TTLL12Q14166 644 aaPredicted RBP23.01■■□□□ 1.27
UBXN1-216ENST00000533908 FZD1Q9UP38 647 aa23.01■■□□□ 1.27
UBXN1-216ENST00000533908 PCDHAC2Q9Y5I4 1007 aa23.01■■□□□ 1.27
UBXN1-216ENST00000533908 KCNJ4P48050 445 aa23■■□□□ 1.27
UBXN1-216ENST00000533908 TM4SF4P48230 202 aa23■■□□□ 1.27
UBXN1-216ENST00000533908 MMP14P50281 582 aa23■■□□□ 1.27
UBXN1-216ENST00000533908 MKRN3Q13064 507 aaKnown RBP23■■□□□ 1.27
UBXN1-216ENST00000533908 PRKG1Q13976 671 aa23■■□□□ 1.27
UBXN1-216ENST00000533908 C15orf52Q6ZUT6 534 aaKnown RBP23■■□□□ 1.27
UBXN1-216ENST00000533908 CTU1Q7Z7A3 348 aaKnown RBP23■■□□□ 1.27
UBXN1-216ENST00000533908 HDAC9Q9UKV0 1011 aa22.99■■□□□ 1.27
UBXN1-216ENST00000533908 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
UBXN1-216ENST00000533908 LDLRAD1Q5T700 205 aa22.98■■□□□ 1.27
UBXN1-216ENST00000533908 ZNF594Q96JF6 807 aaPredicted RBP22.98■■□□□ 1.27
UBXN1-216ENST00000533908 SOX10P56693 466 aa22.97■■□□□ 1.27
UBXN1-216ENST00000533908 IFIT5Q13325 482 aaKnown RBP22.97■■□□□ 1.27
UBXN1-216ENST00000533908 LMBR1LQ6UX01 489 aa22.97■■□□□ 1.27
UBXN1-216ENST00000533908 APOBEC3FQ8IUX4 373 aaKnown RBP22.97■■□□□ 1.27
UBXN1-216ENST00000533908 ZNF296Q8WUU4 475 aaPredicted RBP22.97■■□□□ 1.27
UBXN1-216ENST00000533908 R3HDMLQ9H3Y0 253 aa22.97■■□□□ 1.27
UBXN1-216ENST00000533908 AOX1Q06278 1338 aa22.97■■□□□ 1.27
UBXN1-216ENST00000533908 TNRC18O15417 2968 aaPredicted RBP22.96■■□□□ 1.27
UBXN1-216ENST00000533908 NF2P35240 595 aa22.96■■□□□ 1.27
UBXN1-216ENST00000533908 IL1R1P14778 569 aa22.95■■□□□ 1.26
UBXN1-216ENST00000533908 DLGAP5Q15398 846 aa22.95■■□□□ 1.26
UBXN1-216ENST00000533908 MTMR14Q8NCE2 650 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms