RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 MPHOSPH8Q99549 860 aa23.43■■□□□ 1.34
HIF3A-216ENST00000533789 LEMD3Q9Y2U8 911 aa23.43■■□□□ 1.34
HIF3A-216ENST00000533789 GMLQ99445 158 aa23.42■■□□□ 1.34
HIF3A-216ENST00000533789 ANKRD2Q9GZV1 360 aa23.42■■□□□ 1.34
HIF3A-216ENST00000533789 GGA3Q9NZ52 723 aa23.41■■□□□ 1.34
HIF3A-216ENST00000533789 PAPPA2Q9BXP8 1791 aa23.4■■□□□ 1.34
HIF3A-216ENST00000533789 ZNF804BA4D1E1 1349 aa23.4■■□□□ 1.34
HIF3A-216ENST00000533789 CASP8AP2Q9UKL3 1982 aa23.4■■□□□ 1.34
HIF3A-216ENST00000533789 ANKRD18BA2A2Z9 1011 aa23.4■■□□□ 1.34
HIF3A-216ENST00000533789 FOXO4P98177 505 aa23.4■■□□□ 1.34
HIF3A-216ENST00000533789 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
HIF3A-216ENST00000533789 ADM5C9JUS6 153 aa23.39■■□□□ 1.33
HIF3A-216ENST00000533789 GRM8O00222 908 aa23.39■■□□□ 1.33
HIF3A-216ENST00000533789 USP17L8P0C7I0 530 aa23.39■■□□□ 1.33
HIF3A-216ENST00000533789 DLK2Q6UY11 383 aa23.39■■□□□ 1.33
HIF3A-216ENST00000533789 TXNRD3Q86VQ6 643 aa23.39■■□□□ 1.33
HIF3A-216ENST00000533789 MYH13Q9UKX3 1938 aa23.38■■□□□ 1.33
HIF3A-216ENST00000533789 ALDH1L1O75891 902 aa23.38■■□□□ 1.33
HIF3A-216ENST00000533789 HSPA8P11142 646 aaKnown RBP23.38■■□□□ 1.33
HIF3A-216ENST00000533789 MAP2K2P36507 400 aa23.38■■□□□ 1.33
HIF3A-216ENST00000533789 LBX1P52954 281 aa23.38■■□□□ 1.33
HIF3A-216ENST00000533789 CHRNDQ07001 517 aa23.38■■□□□ 1.33
HIF3A-216ENST00000533789 IFIT5Q13325 482 aaKnown RBP23.38■■□□□ 1.33
HIF3A-216ENST00000533789 SULF1Q8IWU6 871 aa23.38■■□□□ 1.33
HIF3A-216ENST00000533789 MYOZ2Q9NPC6 264 aa23.38■■□□□ 1.33
HIF3A-216ENST00000533789 ASTN2O75129 1339 aaPredicted RBP23.37■■□□□ 1.33
HIF3A-216ENST00000533789 MYO3BQ8WXR4 1341 aa23.37■■□□□ 1.33
HIF3A-216ENST00000533789 AOC2O75106 756 aa23.37■■□□□ 1.33
HIF3A-216ENST00000533789 KLRK1P26718 216 aa23.37■■□□□ 1.33
HIF3A-216ENST00000533789 DACT2Q5SW24 774 aa23.37■■□□□ 1.33
HIF3A-216ENST00000533789 BEGAINQ9BUH8 593 aa23.37■■□□□ 1.33
HIF3A-216ENST00000533789 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
HIF3A-216ENST00000533789 HUNKP57058 714 aa23.36■■□□□ 1.33
HIF3A-216ENST00000533789 SCARF1Q14162 830 aa23.36■■□□□ 1.33
HIF3A-216ENST00000533789 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
HIF3A-216ENST00000533789 SRCIN1Q9C0H9 1055 aa23.36■■□□□ 1.33
HIF3A-216ENST00000533789 GBA2Q9HCG7 927 aaPredicted RBP23.36■■□□□ 1.33
HIF3A-216ENST00000533789 PITPNM2Q9BZ72 1349 aa23.35■■□□□ 1.33
HIF3A-216ENST00000533789 KCNJ4P48050 445 aa23.35■■□□□ 1.33
HIF3A-216ENST00000533789 ANGEL2Q5VTE6 544 aaKnown RBP23.35■■□□□ 1.33
HIF3A-216ENST00000533789 SLC4A10Q6U841 1118 aa23.35■■□□□ 1.33
HIF3A-216ENST00000533789 FBXW7Q969H0 707 aa23.35■■□□□ 1.33
HIF3A-216ENST00000533789 C9orf78Q9NZ63 289 aaPredicted RBP23.35■■□□□ 1.33
HIF3A-216ENST00000533789 E9PSI1 815 aa23.34■■□□□ 1.33
HIF3A-216ENST00000533789 EPHA10Q5JZY3 1008 aa23.34■■□□□ 1.33
HIF3A-216ENST00000533789 LMBR1LQ6UX01 489 aa23.34■■□□□ 1.33
HIF3A-216ENST00000533789 IRS2Q9Y4H2 1338 aa23.33■■□□□ 1.33
HIF3A-216ENST00000533789 CAPN15O75808 1086 aa23.33■■□□□ 1.33
HIF3A-216ENST00000533789 C2orf69Q8N8R5 385 aa23.33■■□□□ 1.33
HIF3A-216ENST00000533789 CDCA5Q96FF9 252 aa23.33■■□□□ 1.33
HIF3A-216ENST00000533789 MXD3Q9BW11 206 aa23.33■■□□□ 1.33
HIF3A-216ENST00000533789 BRPF1P55201 1214 aaPredicted RBP23.32■■□□□ 1.32
HIF3A-216ENST00000533789 CCDC57Q2TAC2 916 aa23.32■■□□□ 1.32
HIF3A-216ENST00000533789 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
HIF3A-216ENST00000533789 OGFOD1Q8N543 542 aa23.32■■□□□ 1.32
HIF3A-216ENST00000533789 TAF5LO75529 589 aa23.31■■□□□ 1.32
HIF3A-216ENST00000533789 MMP14P50281 582 aa23.31■■□□□ 1.32
HIF3A-216ENST00000533789 NOGQ13253 232 aa23.31■■□□□ 1.32
HIF3A-216ENST00000533789 TTLL5Q6EMB2 1281 aa23.31■■□□□ 1.32
HIF3A-216ENST00000533789 MRPL50Q8N5N7 158 aaKnown RBP23.31■■□□□ 1.32
HIF3A-216ENST00000533789 RGMBQ6NW40 437 aa23.3■■□□□ 1.32
HIF3A-216ENST00000533789 HELBQ8NG08 1087 aaPredicted RBP23.3■■□□□ 1.32
HIF3A-216ENST00000533789 UTYO14607 1347 aa23.3■■□□□ 1.32
HIF3A-216ENST00000533789 PTPRCP08575 1304 aa23.3■■□□□ 1.32
HIF3A-216ENST00000533789 LAMB1P07942 1786 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 SNAP23O00161 211 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 CA12O43570 354 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 SLFN5Q08AF3 891 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 NBPF9Q3BBW0 867 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 TAF7LQ5H9L4 462 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 SUCLG2Q96I99 432 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 ZNF594Q96JF6 807 aaPredicted RBP23.29■■□□□ 1.32
HIF3A-216ENST00000533789 CD209Q9NNX6 404 aa23.29■■□□□ 1.32
HIF3A-216ENST00000533789 GTF2IP78347 998 aa23.28■■□□□ 1.32
HIF3A-216ENST00000533789 LDHAL6AQ6ZMR3 332 aa23.28■■□□□ 1.32
HIF3A-216ENST00000533789 ZNF804AQ7Z570 1209 aa23.28■■□□□ 1.32
HIF3A-216ENST00000533789 FAM155AB1AL88 458 aaPredicted RBP23.27■■□□□ 1.32
HIF3A-216ENST00000533789 WNT10BO00744 389 aa23.27■■□□□ 1.32
HIF3A-216ENST00000533789 NBPF7P0C2Y1 421 aaPredicted RBP23.27■■□□□ 1.32
HIF3A-216ENST00000533789 KAZALD1Q96I82 304 aa23.27■■□□□ 1.32
HIF3A-216ENST00000533789 CNNM1Q9NRU3 951 aa23.27■■□□□ 1.32
HIF3A-216ENST00000533789 FKBP1BP68106 108 aa23.26■■□□□ 1.31
HIF3A-216ENST00000533789 KIAA0825Q8IV33 1275 aa23.26■■□□□ 1.31
HIF3A-216ENST00000533789 SSH1Q8WYL5 1049 aa23.26■■□□□ 1.31
HIF3A-216ENST00000533789 CCDC102AQ96A19 550 aa23.26■■□□□ 1.31
HIF3A-216ENST00000533789 ZIC5Q96T25 663 aa23.26■■□□□ 1.31
HIF3A-216ENST00000533789 HDAC9Q9UKV0 1011 aa23.26■■□□□ 1.31
HIF3A-216ENST00000533789 IL1R1P14778 569 aa23.25■■□□□ 1.31
HIF3A-216ENST00000533789 ZNF157P51786 506 aaPredicted RBP23.25■■□□□ 1.31
HIF3A-216ENST00000533789 TSKSQ9UJT2 592 aa23.25■■□□□ 1.31
HIF3A-216ENST00000533789 COL1A1P02452 1464 aaPredicted RBP23.24■■□□□ 1.31
HIF3A-216ENST00000533789 SASH1O94885 1247 aa23.24■■□□□ 1.31
HIF3A-216ENST00000533789 SLC10A3P09131 477 aa23.24■■□□□ 1.31
HIF3A-216ENST00000533789 SCAF8Q9UPN6 1271 aaKnown RBP23.24■■□□□ 1.31
HIF3A-216ENST00000533789 PLIN1O60240 522 aa23.23■■□□□ 1.31
HIF3A-216ENST00000533789 ALDH1L2Q3SY69 923 aa23.23■■□□□ 1.31
HIF3A-216ENST00000533789 RABL6Q3YEC7 729 aaPredicted RBP23.23■■□□□ 1.31
HIF3A-216ENST00000533789 ZBED3Q96IU2 234 aaPredicted RBP23.23■■□□□ 1.31
HIF3A-216ENST00000533789 BICC1Q9H694 974 aaKnown RBP23.23■■□□□ 1.31
HIF3A-216ENST00000533789 OTOFQ9HC10 1997 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms