RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ECM29Q5VYK3 1845 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 USP17L3A6NCW0 530 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 USP17L4A6NCW7 530 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 WNT10BO00744 389 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 CACNB1Q02641 598 aaPredicted RBP16.11■□□□□ 0.17
SVIP-205ENST00000533774 SREBF2Q12772 1141 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 LDLRAD1Q5T700 205 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 USP17L1Q7RTZ2 530 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 CCER1Q8TC90 406 aaPredicted RBP16.11■□□□□ 0.17
SVIP-205ENST00000533774 MYH3P11055 1940 aa16.11■□□□□ 0.17
SVIP-205ENST00000533774 RIPK4P57078 832 aa16.1■□□□□ 0.17
SVIP-205ENST00000533774 BABAM1Q9NWV8 329 aa16.1■□□□□ 0.17
SVIP-205ENST00000533774 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
SVIP-205ENST00000533774 IGF2BP3O00425 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
SVIP-205ENST00000533774 SASH1O94885 1247 aa16.09■□□□□ 0.17
SVIP-205ENST00000533774 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
SVIP-205ENST00000533774 DACT2Q5SW24 774 aa16.09■□□□□ 0.17
SVIP-205ENST00000533774 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
SVIP-205ENST00000533774 JARID2Q92833 1246 aaPredicted RBP16.09■□□□□ 0.17
SVIP-205ENST00000533774 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
SVIP-205ENST00000533774 MAPK8IP3Q9UPT6 1336 aa16.09■□□□□ 0.17
SVIP-205ENST00000533774 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
SVIP-205ENST00000533774 PTPN22Q9Y2R2 807 aa16.08■□□□□ 0.16
SVIP-205ENST00000533774 ZSWIM8A7E2V4 1837 aa16.08■□□□□ 0.16
SVIP-205ENST00000533774 OTOFQ9HC10 1997 aa16.07■□□□□ 0.16
SVIP-205ENST00000533774 PODNQ7Z5L7 613 aa16.07■□□□□ 0.16
SVIP-205ENST00000533774 CD99L2Q8TCZ2 262 aa16.07■□□□□ 0.16
SVIP-205ENST00000533774 ARMC5Q96C12 935 aa16.07■□□□□ 0.16
SVIP-205ENST00000533774 CLMNQ96JQ2 1002 aa16.07■□□□□ 0.16
SVIP-205ENST00000533774 ANGEL1Q9UNK9 670 aaKnown RBP16.07■□□□□ 0.16
SVIP-205ENST00000533774 XDHP47989 1333 aa16.07■□□□□ 0.16
SVIP-205ENST00000533774 SSC5DA1L4H1 1573 aa16.07■□□□□ 0.16
SVIP-205ENST00000533774 CHL1O00533 1208 aa16.06■□□□□ 0.16
SVIP-205ENST00000533774 NF2P35240 595 aa16.06■□□□□ 0.16
SVIP-205ENST00000533774 TMPOP42166 694 aaKnown RBP16.06■□□□□ 0.16
SVIP-205ENST00000533774 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
SVIP-205ENST00000533774 ARMC9Q7Z3E5 817 aa16.06■□□□□ 0.16
SVIP-205ENST00000533774 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
SVIP-205ENST00000533774 ZBED3Q96IU2 234 aaPredicted RBP16.06■□□□□ 0.16
SVIP-205ENST00000533774 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.06■□□□□ 0.16
SVIP-205ENST00000533774 ALDH1A1P00352 501 aa16.05■□□□□ 0.16
SVIP-205ENST00000533774 ATP2B4P23634 1241 aa16.05■□□□□ 0.16
SVIP-205ENST00000533774 TXNRD3Q86VQ6 643 aa16.05■□□□□ 0.16
SVIP-205ENST00000533774 MANSC4A6NHS7 340 aaPredicted RBP16.04■□□□□ 0.16
SVIP-205ENST00000533774 GJA5P36382 358 aa16.04■□□□□ 0.16
SVIP-205ENST00000533774 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
SVIP-205ENST00000533774 MED23Q9ULK4 1368 aa16.03■□□□□ 0.16
SVIP-205ENST00000533774 DSG3P32926 999 aa16.03■□□□□ 0.16
SVIP-205ENST00000533774 CRHR2Q13324 411 aa16.03■□□□□ 0.16
SVIP-205ENST00000533774 CCDC152Q4G0S7 254 aa16.03■□□□□ 0.16
SVIP-205ENST00000533774 FBXW7Q969H0 707 aa16.03■□□□□ 0.16
SVIP-205ENST00000533774 SLC10A4Q96EP9 437 aa16.03■□□□□ 0.16
SVIP-205ENST00000533774 OTUD5Q96G74 571 aa16.03■□□□□ 0.16
SVIP-205ENST00000533774 DBF4Q9UBU7 674 aaPredicted RBP16.03■□□□□ 0.16
SVIP-205ENST00000533774 PDE8AO60658 829 aa16.02■□□□□ 0.16
SVIP-205ENST00000533774 MAP3K11Q16584 847 aa16.02■□□□□ 0.16
SVIP-205ENST00000533774 ANKRD18AQ8IVF6 992 aa16.02■□□□□ 0.16
SVIP-205ENST00000533774 ERO1AQ96HE7 468 aa16.02■□□□□ 0.16
SVIP-205ENST00000533774 PTPN18Q99952 460 aa16.02■□□□□ 0.16
SVIP-205ENST00000533774 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
SVIP-205ENST00000533774 PHAXQ9H814 394 aaKnown RBP16.02■□□□□ 0.16
SVIP-205ENST00000533774 LAS1LQ9Y4W2 734 aaKnown RBP16.02■□□□□ 0.16
SVIP-205ENST00000533774 PCDHAC2Q9Y5I4 1007 aa16.02■□□□□ 0.16
SVIP-205ENST00000533774 RANBP2P49792 3224 aaKnown RBP16.01■□□□□ 0.15
SVIP-205ENST00000533774 H0YGN5 161 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
SVIP-205ENST00000533774 KLRK1P26718 216 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 INHBEP58166 350 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 STRIP1Q5VSL9 837 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 APOBEC3FQ8IUX4 373 aaKnown RBP16.01■□□□□ 0.15
SVIP-205ENST00000533774 OGFOD1Q8N543 542 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 ZNF333Q96JL9 665 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 MYD88Q99836 296 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 EFCC1Q9HA90 598 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 MINPP1Q9UNW1 487 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
SVIP-205ENST00000533774 ABCB7O75027 752 aa16■□□□□ 0.15
SVIP-205ENST00000533774 ZBTB48P10074 688 aaPredicted RBP16■□□□□ 0.15
SVIP-205ENST00000533774 NEUROD2Q15784 382 aa16■□□□□ 0.15
SVIP-205ENST00000533774 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
SVIP-205ENST00000533774 KIAA0825Q8IV33 1275 aa16■□□□□ 0.15
SVIP-205ENST00000533774 DEFB129Q9H1M3 183 aa16■□□□□ 0.15
SVIP-205ENST00000533774 A0A1B0GUL6 1792 aa16■□□□□ 0.15
SVIP-205ENST00000533774 AOX1Q06278 1338 aa15.99■□□□□ 0.15
SVIP-205ENST00000533774 MYO3BQ8WXR4 1341 aa15.99■□□□□ 0.15
SVIP-205ENST00000533774 HOXB7P09629 217 aa15.99■□□□□ 0.15
SVIP-205ENST00000533774 CCT4P50991 539 aaKnown RBP15.99■□□□□ 0.15
SVIP-205ENST00000533774 DUSP27Q5VZP5 1158 aa15.99■□□□□ 0.15
SVIP-205ENST00000533774 COL1A1P02452 1464 aaPredicted RBP15.98■□□□□ 0.15
SVIP-205ENST00000533774 COL6A3P12111 3177 aa15.98■□□□□ 0.15
SVIP-205ENST00000533774 SP3Q02447 781 aa15.98■□□□□ 0.15
SVIP-205ENST00000533774 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
SVIP-205ENST00000533774 TTLL5Q6EMB2 1281 aa15.98■□□□□ 0.15
SVIP-205ENST00000533774 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
SVIP-205ENST00000533774 COA1Q9GZY4 146 aa15.98■□□□□ 0.15
SVIP-205ENST00000533774 PTCH2Q9Y6C5 1203 aa15.98■□□□□ 0.15
SVIP-205ENST00000533774 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
SVIP-205ENST00000533774 CERS5Q8N5B7 392 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms