RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 ZNF16P17020 682 aaPredicted RBP10.16□□□□□ -0.78
CASP4-212ENST00000533730 ATP2B4P23634 1241 aa10.16□□□□□ -0.78
CASP4-212ENST00000533730 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
CASP4-212ENST00000533730 MARCH10Q8NA82 808 aaPredicted RBP10.16□□□□□ -0.78
CASP4-212ENST00000533730 BCL2L13Q9BXK5 485 aa10.16□□□□□ -0.78
CASP4-212ENST00000533730 COL3A1P02461 1466 aaPredicted RBP10.16□□□□□ -0.78
CASP4-212ENST00000533730 KDRP35968 1356 aa10.15□□□□□ -0.78
CASP4-212ENST00000533730 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.78
CASP4-212ENST00000533730 SCNN1AP37088 669 aa10.15□□□□□ -0.78
CASP4-212ENST00000533730 AMOTQ4VCS5 1084 aa10.15□□□□□ -0.78
CASP4-212ENST00000533730 FAM182BQ5T319 152 aa10.15□□□□□ -0.78
CASP4-212ENST00000533730 ANKMY2Q8IV38 441 aa10.15□□□□□ -0.78
CASP4-212ENST00000533730 TLL2Q9Y6L7 1015 aa10.15□□□□□ -0.78
CASP4-212ENST00000533730 RGPD1P0DJD0 1748 aa10.15□□□□□ -0.78
CASP4-212ENST00000533730 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
CASP4-212ENST00000533730 BAG6P46379 1132 aa10.14□□□□□ -0.79
CASP4-212ENST00000533730 MARSP56192 900 aaKnown RBP10.14□□□□□ -0.79
CASP4-212ENST00000533730 SLFNL1Q499Z3 407 aa10.14□□□□□ -0.79
CASP4-212ENST00000533730 SULT6B1Q6IMI4 303 aa10.14□□□□□ -0.79
CASP4-212ENST00000533730 DDX54Q8TDD1 881 aaKnown RBP10.14□□□□□ -0.79
CASP4-212ENST00000533730 CEP126Q9P2H0 1117 aa10.14□□□□□ -0.79
CASP4-212ENST00000533730 BIN2Q9UBW5 565 aaPredicted RBP10.14□□□□□ -0.79
CASP4-212ENST00000533730 MAP4K5Q9Y4K4 846 aa10.14□□□□□ -0.79
CASP4-212ENST00000533730 PKD1L3Q7Z443 1732 aa10.13□□□□□ -0.79
CASP4-212ENST00000533730 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
CASP4-212ENST00000533730 U2SURPO15042 1029 aaKnown RBP10.13□□□□□ -0.79
CASP4-212ENST00000533730 GFRA3O60609 400 aa10.13□□□□□ -0.79
CASP4-212ENST00000533730 TRIM37O94972 964 aa10.13□□□□□ -0.79
CASP4-212ENST00000533730 PLEKHO1Q53GL0 409 aaPredicted RBP10.13□□□□□ -0.79
CASP4-212ENST00000533730 RNF135Q8IUD6 432 aa10.13□□□□□ -0.79
CASP4-212ENST00000533730 CYP4X1Q8N118 509 aa10.13□□□□□ -0.79
CASP4-212ENST00000533730 PRKRIP1Q9H875 184 aaPredicted RBP10.13□□□□□ -0.79
CASP4-212ENST00000533730 J3QL48 77 aa10.12□□□□□ -0.79
CASP4-212ENST00000533730 SMPD1P17405 629 aa10.12□□□□□ -0.79
CASP4-212ENST00000533730 GRM5P41594 1212 aa10.12□□□□□ -0.79
CASP4-212ENST00000533730 PLPP7Q8NBV4 271 aa10.12□□□□□ -0.79
CASP4-212ENST00000533730 GIPC2Q8TF65 315 aa10.12□□□□□ -0.79
CASP4-212ENST00000533730 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
CASP4-212ENST00000533730 ANP32CO43423 234 aa10.11□□□□□ -0.79
CASP4-212ENST00000533730 HSP90AB1P08238 724 aaKnown RBP10.11□□□□□ -0.79
CASP4-212ENST00000533730 DPYDQ12882 1025 aa10.11□□□□□ -0.79
CASP4-212ENST00000533730 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
CASP4-212ENST00000533730 PHTF2Q8N3S3 785 aa10.11□□□□□ -0.79
CASP4-212ENST00000533730 ZNF594Q96JF6 807 aaPredicted RBP10.11□□□□□ -0.79
CASP4-212ENST00000533730 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
CASP4-212ENST00000533730 SBF2Q86WG5 1849 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 NHSQ6T4R5 1651 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 TTC24A2A3L6 582 aaPredicted RBP10.1□□□□□ -0.79
CASP4-212ENST00000533730 CYP27B1O15528 508 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 ALDH1A1P00352 501 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 HMOX1P09601 288 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 U2AF1L5P0DN76 240 aaPredicted RBP10.1□□□□□ -0.79
CASP4-212ENST00000533730 U2AF1Q01081 240 aaKnown RBP eCLIP10.1□□□□□ -0.79
CASP4-212ENST00000533730 LAPTM4AQ15012 233 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 C1orf141Q5JVX7 400 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 SLC10A4Q96EP9 437 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 IRX2Q9BZI1 471 aaPredicted RBP10.1□□□□□ -0.79
CASP4-212ENST00000533730 PNNQ9H307 717 aaKnown RBP10.1□□□□□ -0.79
CASP4-212ENST00000533730 CDV3Q9UKY7 258 aaKnown RBP10.1□□□□□ -0.79
CASP4-212ENST00000533730 PCDHB9Q9Y5E1 797 aa10.1□□□□□ -0.79
CASP4-212ENST00000533730 ANKRD33BA6NCL7 494 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 PLSCR1O15162 318 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 APBA3O96018 575 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 ADH1CP00326 375 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 NEFMP07197 916 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 PHKG2P15735 406 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 CLDN10P78369 228 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 SWI5Q1ZZU3 235 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 ZNF530Q6P9A1 599 aaPredicted RBP10.09□□□□□ -0.79
CASP4-212ENST00000533730 DZIP3Q86Y13 1208 aaKnown RBP10.09□□□□□ -0.79
CASP4-212ENST00000533730 NPAS4Q8IUM7 802 aa10.09□□□□□ -0.79
CASP4-212ENST00000533730 MCCD1P59942 119 aaPredicted RBP10.08□□□□□ -0.8
CASP4-212ENST00000533730 ARID5BQ14865 1188 aa10.08□□□□□ -0.8
CASP4-212ENST00000533730 VASH1Q7L8A9 365 aaPredicted RBP10.08□□□□□ -0.8
CASP4-212ENST00000533730 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
CASP4-212ENST00000533730 ACSBG1Q96GR2 724 aa10.08□□□□□ -0.8
CASP4-212ENST00000533730 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
CASP4-212ENST00000533730 RGPD3A6NKT7 1758 aaPredicted RBP10.08□□□□□ -0.8
CASP4-212ENST00000533730 RGPD4Q7Z3J3 1758 aa10.08□□□□□ -0.8
CASP4-212ENST00000533730 ESPNB1AK53 854 aa10.07□□□□□ -0.8
CASP4-212ENST00000533730 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
CASP4-212ENST00000533730 HMGB2P26583 209 aaKnown RBP10.07□□□□□ -0.8
CASP4-212ENST00000533730 PRKAR2BP31323 418 aa10.07□□□□□ -0.8
CASP4-212ENST00000533730 EML3Q32P44 896 aa10.07□□□□□ -0.8
CASP4-212ENST00000533730 AKAP4Q5JQC9 854 aa10.07□□□□□ -0.8
CASP4-212ENST00000533730 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
CASP4-212ENST00000533730 KCTD15Q96SI1 283 aaPredicted RBP10.07□□□□□ -0.8
CASP4-212ENST00000533730 DOT1LQ8TEK3 1739 aa10.07□□□□□ -0.8
CASP4-212ENST00000533730 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
CASP4-212ENST00000533730 KCNQ2O43526 872 aa10.06□□□□□ -0.8
CASP4-212ENST00000533730 NR5A1Q13285 461 aa10.06□□□□□ -0.8
CASP4-212ENST00000533730 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
CASP4-212ENST00000533730 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
CASP4-212ENST00000533730 ZNF592Q92610 1267 aa10.06□□□□□ -0.8
CASP4-212ENST00000533730 CAMKK2Q96RR4 588 aa10.06□□□□□ -0.8
CASP4-212ENST00000533730 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
CASP4-212ENST00000533730 PRMT3O60678 531 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 AVPP01185 164 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 NR3C2P08235 984 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms