RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CCDC144CPQ8IYA2 1237 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 GOLGA1Q92805 767 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 ZBTB40Q9NUA8 1239 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 PPP1R1BQ9UD71 204 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-236ENST00000533667 DNAI1Q9UI46 699 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 NPC1L1Q9UHC9 1359 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 SYT1P21579 422 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 DNA2P51530 1060 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 TSHZ3Q63HK5 1081 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 CEP85Q6P2H3 762 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 PANK2Q9BZ23 570 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 PRPF4BQ13523 1007 aaKnown RBP7.97□□□□□ -1.13
CTNND1-236ENST00000533667 AOPEPQ8N6M6 819 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 XAGE3Q8WTP9 111 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 CCDC77Q9BR77 488 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 AOX1Q06278 1338 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 MACROD2A1Z1Q3 448 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 VAMP4O75379 141 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 DNM1Q05193 864 aaKnown RBP7.97□□□□□ -1.13
CTNND1-236ENST00000533667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-236ENST00000533667 C8orf58Q8NAV2 365 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 PPM1EQ8WY54 764 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 PAG1Q9NWQ8 432 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 SLC4A4Q9Y6R1 1079 aa7.97□□□□□ -1.13
CTNND1-236ENST00000533667 UHRF1BP1Q6BDS2 1440 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 C6orf229H3BNL8 230 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 RNF113AO15541 343 aaKnown RBP7.96□□□□□ -1.13
CTNND1-236ENST00000533667 TSPY3P0CV98 308 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 TSPY8P0CW00 308 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 KRT13P13646 458 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 NMIQ13287 307 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-236ENST00000533667 FEZ1Q99689 392 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 DNAJC25Q9H1X3 360 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 UHRF1BP1LA0JNW5 1464 aa7.96□□□□□ -1.13
CTNND1-236ENST00000533667 CYP7A1P22680 504 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 DHX32Q7L7V1 743 aaKnown RBP7.96□□□□□ -1.14
CTNND1-236ENST00000533667 C6orf50Q9HD87 102 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 IKBKGQ9Y6K9 419 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 MYO1BO43795 1136 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 HSPA4P34932 840 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 KIF5AQ12840 1032 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 TUBB2AQ13885 445 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 RUFY3Q7L099 469 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 COPS6Q7L5N1 327 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 SREK1Q8WXA9 508 aaKnown RBP7.96□□□□□ -1.14
CTNND1-236ENST00000533667 NAP1L4Q99733 375 aaKnown RBP7.96□□□□□ -1.14
CTNND1-236ENST00000533667 TUBB2BQ9BVA1 445 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 HOMER2Q9NSB8 354 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 SHANK2Q9UPX8 1470 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 A2MP01023 1474 aa7.96□□□□□ -1.14
CTNND1-236ENST00000533667 UBE4AQ14139 1066 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 CREB3L3Q68CJ9 461 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 LMBR1LQ6UX01 489 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 PRIM1P49642 420 aaKnown RBP7.95□□□□□ -1.14
CTNND1-236ENST00000533667 EIF4A2Q14240 407 aaKnown RBP7.95□□□□□ -1.14
CTNND1-236ENST00000533667 PLEKHM2Q8IWE5 1019 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 ARFGAP2Q8N6H7 521 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 ZFP91Q96JP5 570 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-236ENST00000533667 TTC14Q96N46 770 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 TSNARE1Q96NA8 513 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 RASSF4Q9H2L5 321 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 TMX1Q9H3N1 280 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 PLCG2P16885 1265 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 AFMP43652 599 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 AK2P54819 239 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 ISM2Q6H9L7 571 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 ZCRB1Q8TBF4 217 aaKnown RBP7.95□□□□□ -1.14
CTNND1-236ENST00000533667 POLKQ9UBT6 870 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 MAP3K5Q99683 1374 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 NPATQ14207 1427 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 CHMLP26374 656 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 ST5P78524 1137 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 SLC9C2Q5TAH2 1124 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 UTP14CQ5TAP6 766 aaKnown RBP7.95□□□□□ -1.14
CTNND1-236ENST00000533667 NAA16Q6N069 864 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-236ENST00000533667 USP26Q9BXU7 913 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 VAT1LQ9HCJ6 419 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 HELLSQ9NRZ9 838 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 STX8Q9UNK0 236 aa7.95□□□□□ -1.14
CTNND1-236ENST00000533667 KRT2P35908 639 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 TERF1P54274 439 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 ASIC1P78348 528 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 CNGA4Q8IV77 575 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 LRRC45Q96CN5 670 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 LRCH2Q5VUJ6 765 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 CCDC42Q96M95 316 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 TSGA10Q9BZW7 698 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 ZNF518AQ6AHZ1 1483 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 VGLL3A8MV65 326 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 ATP2A1O14983 1001 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 GNA11P29992 359 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 KRT79Q5XKE5 535 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 LLPHQ9BRT6 129 aaKnown RBP7.94□□□□□ -1.14
CTNND1-236ENST00000533667 HOXB7P09629 217 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 TRIM14Q14142 442 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 TICAM2Q86XR7 235 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 IQUBQ8NA54 791 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 ZSWIM4Q9H7M6 989 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 PTPRKQ15262 1439 aa7.94□□□□□ -1.14
CTNND1-236ENST00000533667 ELP1O95163 1332 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms