RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 ADARB2Q9NS39 739 aaKnown RBP21.43■■□□□ 1.02
CTSB-229ENST00000533572 LRRFIP2Q9Y608 721 aaKnown RBP21.43■■□□□ 1.02
CTSB-229ENST00000533572 ZNF804BA4D1E1 1349 aa21.42■■□□□ 1.02
CTSB-229ENST00000533572 USP50Q70EL3 339 aaPredicted RBP21.42■■□□□ 1.02
CTSB-229ENST00000533572 H7C1D1 291 aa21.41■■□□□ 1.02
CTSB-229ENST00000533572 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
CTSB-229ENST00000533572 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
CTSB-229ENST00000533572 RPS12P25398 132 aaKnown RBP21.4■■□□□ 1.02
CTSB-229ENST00000533572 MTX1Q13505 466 aa21.4■■□□□ 1.02
CTSB-229ENST00000533572 PODNQ7Z5L7 613 aa21.4■■□□□ 1.02
CTSB-229ENST00000533572 KAZALD1Q96I82 304 aa21.4■■□□□ 1.02
CTSB-229ENST00000533572 DPF2Q92785 391 aa21.39■■□□□ 1.01
CTSB-229ENST00000533572 CNOT7Q9UIV1 285 aaKnown RBP21.39■■□□□ 1.01
CTSB-229ENST00000533572 ZBTB12Q9Y330 459 aaPredicted RBP21.39■■□□□ 1.01
CTSB-229ENST00000533572 ERICH6BQ5W0A0 696 aa21.38■■□□□ 1.01
CTSB-229ENST00000533572 MICALL2Q8IY33 904 aa21.38■■□□□ 1.01
CTSB-229ENST00000533572 HELBQ8NG08 1087 aaPredicted RBP21.38■■□□□ 1.01
CTSB-229ENST00000533572 COA1Q9GZY4 146 aa21.38■■□□□ 1.01
CTSB-229ENST00000533572 HMMRO75330 724 aa21.37■■□□□ 1.01
CTSB-229ENST00000533572 TAF5LO75529 589 aa21.37■■□□□ 1.01
CTSB-229ENST00000533572 MAP1SQ66K74 1059 aaPredicted RBP21.37■■□□□ 1.01
CTSB-229ENST00000533572 ANKRD44Q8N8A2 993 aa21.37■■□□□ 1.01
CTSB-229ENST00000533572 EXOC6Q8TAG9 804 aa21.37■■□□□ 1.01
CTSB-229ENST00000533572 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
CTSB-229ENST00000533572 KCNQ5Q9NR82 932 aa21.37■■□□□ 1.01
CTSB-229ENST00000533572 USP17L3A6NCW0 530 aa21.36■■□□□ 1.01
CTSB-229ENST00000533572 USP17L4A6NCW7 530 aa21.36■■□□□ 1.01
CTSB-229ENST00000533572 WTIPA6NIX2 430 aaPredicted RBP21.36■■□□□ 1.01
CTSB-229ENST00000533572 VIL1P09327 827 aaKnown RBP21.36■■□□□ 1.01
CTSB-229ENST00000533572 ATP8B2P98198 1209 aa21.36■■□□□ 1.01
CTSB-229ENST00000533572 USP17L1Q7RTZ2 530 aa21.36■■□□□ 1.01
CTSB-229ENST00000533572 CNTROBQ8N137 903 aa21.36■■□□□ 1.01
CTSB-229ENST00000533572 ADAMTSL1Q8N6G6 1762 aa21.36■■□□□ 1.01
CTSB-229ENST00000533572 IRX6P78412 446 aaPredicted RBP21.35■■□□□ 1.01
CTSB-229ENST00000533572 RSBN1LQ6PCB5 846 aaPredicted RBP21.35■■□□□ 1.01
CTSB-229ENST00000533572 MROH5Q6ZUA9 1318 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 SCN9AQ15858 1988 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 HTRA3P83110 453 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 CEP85Q6P2H3 762 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 AGBL3Q8NEM8 1001 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 FBXO3Q9UK99 471 aa21.34■■□□□ 1.01
CTSB-229ENST00000533572 KLRK1P26718 216 aa21.33■■□□□ 1.01
CTSB-229ENST00000533572 ZNF804AQ7Z570 1209 aa21.33■■□□□ 1.01
CTSB-229ENST00000533572 TXNRD3Q86VQ6 643 aa21.33■■□□□ 1.01
CTSB-229ENST00000533572 TRPM4Q8TD43 1214 aa21.33■■□□□ 1.01
CTSB-229ENST00000533572 PASKQ96RG2 1323 aa21.32■■□□□ 1
CTSB-229ENST00000533572 SHTN1A0MZ66 631 aa21.32■■□□□ 1
CTSB-229ENST00000533572 METTL24Q5JXM2 366 aa21.32■■□□□ 1
CTSB-229ENST00000533572 DNAJC5GQ8N7S2 189 aa21.32■■□□□ 1
CTSB-229ENST00000533572 SSH3Q8TE77 659 aa21.32■■□□□ 1
CTSB-229ENST00000533572 PUS3Q9BZE2 481 aaKnown RBP21.32■■□□□ 1
CTSB-229ENST00000533572 SNAP23O00161 211 aa21.31■■□□□ 1
CTSB-229ENST00000533572 ITGBL1O95965 494 aaPredicted RBP21.31■■□□□ 1
CTSB-229ENST00000533572 UBE4AQ14139 1066 aa21.31■■□□□ 1
CTSB-229ENST00000533572 POLA2Q14181 598 aa21.31■■□□□ 1
CTSB-229ENST00000533572 TBC1D10BQ4KMP7 808 aaPredicted RBP21.31■■□□□ 1
CTSB-229ENST00000533572 RBM26Q5T8P6 1007 aaKnown RBP21.31■■□□□ 1
CTSB-229ENST00000533572 STRIP1Q5VSL9 837 aa21.31■■□□□ 1
CTSB-229ENST00000533572 C15orf52Q6ZUT6 534 aaKnown RBP21.31■■□□□ 1
CTSB-229ENST00000533572 SAMD7Q7Z3H4 446 aa21.31■■□□□ 1
CTSB-229ENST00000533572 ZC3H15Q8WU90 426 aaKnown RBP21.31■■□□□ 1
CTSB-229ENST00000533572 CREBZFQ9NS37 354 aa21.31■■□□□ 1
CTSB-229ENST00000533572 PSME4Q14997 1843 aa21.31■■□□□ 1
CTSB-229ENST00000533572 A0A1B0GUL6 1792 aa21.31■■□□□ 1
CTSB-229ENST00000533572 MYO3BQ8WXR4 1341 aa21.3■■□□□ 1
CTSB-229ENST00000533572 CD209Q9NNX6 404 aa21.3■■□□□ 1
CTSB-229ENST00000533572 COPRSQ9NQ92 184 aa21.3■■□□□ 1
CTSB-229ENST00000533572 RIPOR2Q9Y4F9 1068 aa21.3■■□□□ 1
CTSB-229ENST00000533572 ZNF609O15014 1411 aa21.29■■□□□ 1
CTSB-229ENST00000533572 TMEM88BA6NKF7 163 aa21.29■■□□□ 1
CTSB-229ENST00000533572 USP17L8P0C7I0 530 aa21.29■■□□□ 1
CTSB-229ENST00000533572 KIF4BQ2VIQ3 1234 aa21.29■■□□□ 1
CTSB-229ENST00000533572 LRRC24Q50LG9 513 aa21.29■■□□□ 1
CTSB-229ENST00000533572 HSP90AB4PQ58FF6 505 aa21.29■■□□□ 1
CTSB-229ENST00000533572 TTLL5Q6EMB2 1281 aa21.29■■□□□ 1
CTSB-229ENST00000533572 KLHDC4Q8TBB5 520 aa21.29■■□□□ 1
CTSB-229ENST00000533572 PNMA6EA0A0J9YXQ4 647 aa21.28■■□□□ 1
CTSB-229ENST00000533572 RFX5P48382 616 aaPredicted RBP21.28■■□□□ 1
CTSB-229ENST00000533572 HIRAP54198 1017 aaPredicted RBP21.28■■□□□ 1
CTSB-229ENST00000533572 GTF2IP78347 998 aa21.28■■□□□ 1
CTSB-229ENST00000533572 DACT2Q5SW24 774 aa21.28■■□□□ 1
CTSB-229ENST00000533572 OGFOD1Q8N543 542 aa21.28■■□□□ 1
CTSB-229ENST00000533572 KLRG1Q96E93 195 aa21.28■■□□□ 1
CTSB-229ENST00000533572 CIAO1O76071 339 aa21.27■■□□□ 1
CTSB-229ENST00000533572 PTPN12Q05209 780 aaKnown RBP21.27■■□□□ 1
CTSB-229ENST00000533572 VPS37DQ86XT2 251 aa21.27■■□□□ 1
CTSB-229ENST00000533572 RWDD1Q9H446 243 aaPredicted RBP21.27■■□□□ 1
CTSB-229ENST00000533572 PCDHB15Q9Y5E8 787 aa21.27■■□□□ 1
CTSB-229ENST00000533572 EYA2O00167 538 aa21.26■□□□□ 0.99
CTSB-229ENST00000533572 ZNF280AP59817 542 aaPredicted RBP21.26■□□□□ 0.99
CTSB-229ENST00000533572 HDAC1Q13547 482 aaPredicted RBP21.26■□□□□ 0.99
CTSB-229ENST00000533572 CDC37L1Q7L3B6 337 aa21.26■□□□□ 0.99
CTSB-229ENST00000533572 DCPSQ96C86 337 aaKnown RBP21.26■□□□□ 0.99
CTSB-229ENST00000533572 HDAC9Q9UKV0 1011 aa21.26■□□□□ 0.99
CTSB-229ENST00000533572 IRS2Q9Y4H2 1338 aa21.26■□□□□ 0.99
CTSB-229ENST00000533572 PDE8BO95263 885 aa21.25■□□□□ 0.99
CTSB-229ENST00000533572 HIBADHP31937 336 aaKnown RBP21.25■□□□□ 0.99
CTSB-229ENST00000533572 G3BP1Q13283 466 aaKnown RBP eCLIP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms