RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 GORABQ5T7V8 394 aa21.51■■□□□ 1.03
NXF1-216ENST00000533499 CCDC136Q96JN2 1154 aa21.51■■□□□ 1.03
NXF1-216ENST00000533499 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.51■■□□□ 1.03
NXF1-216ENST00000533499 SNED1Q8TER0 1413 aa21.51■■□□□ 1.03
NXF1-216ENST00000533499 LTBP3Q9NS15 1303 aa21.51■■□□□ 1.03
NXF1-216ENST00000533499 LTBP1Q14766 1721 aa21.5■■□□□ 1.03
NXF1-216ENST00000533499 C9orf131Q5VYM1 1079 aa21.5■■□□□ 1.03
NXF1-216ENST00000533499 VPS37DQ86XT2 251 aa21.5■■□□□ 1.03
NXF1-216ENST00000533499 NIM1KQ8IY84 436 aa21.5■■□□□ 1.03
NXF1-216ENST00000533499 JDP2Q8WYK2 163 aa21.5■■□□□ 1.03
NXF1-216ENST00000533499 LPIN2Q92539 896 aa21.5■■□□□ 1.03
NXF1-216ENST00000533499 LRRCC1Q9C099 1032 aa21.5■■□□□ 1.03
NXF1-216ENST00000533499 A0A1B0GUL7 405 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 GYG1P46976 350 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 PRELPP51888 382 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 KIAA2012Q0VF49 1180 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 TNNI3KQ59H18 835 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 ANKRD45Q5TZF3 282 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 AACSQ86V21 672 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 TXNRD3Q86VQ6 643 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 GCC1Q96CN9 775 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 CCDC8Q9H0W5 538 aaPredicted RBP21.49■■□□□ 1.03
NXF1-216ENST00000533499 DBNDD1Q9H9R9 158 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 FPGT-TNNI3KV9GXZ4 949 aa21.49■■□□□ 1.03
NXF1-216ENST00000533499 MED23Q9ULK4 1368 aa21.48■■□□□ 1.03
NXF1-216ENST00000533499 ADORA1P30542 326 aa21.48■■□□□ 1.03
NXF1-216ENST00000533499 CAVIN4Q5BKX8 364 aa21.48■■□□□ 1.03
NXF1-216ENST00000533499 ZNF804AQ7Z570 1209 aa21.48■■□□□ 1.03
NXF1-216ENST00000533499 CLASRPQ8N2M8 674 aaKnown RBP21.48■■□□□ 1.03
NXF1-216ENST00000533499 FBXW7Q969H0 707 aa21.48■■□□□ 1.03
NXF1-216ENST00000533499 GOLGB1Q14789 3259 aaKnown RBP21.47■■□□□ 1.03
NXF1-216ENST00000533499 FGFR2P21802 821 aa21.47■■□□□ 1.03
NXF1-216ENST00000533499 SBF1O95248 1867 aa21.47■■□□□ 1.03
NXF1-216ENST00000533499 FRAT2O75474 233 aaPredicted RBP21.46■■□□□ 1.03
NXF1-216ENST00000533499 IFIT2P09913 472 aaKnown RBP21.46■■□□□ 1.03
NXF1-216ENST00000533499 HIBADHP31937 336 aaKnown RBP21.46■■□□□ 1.03
NXF1-216ENST00000533499 XAGE2Q96GT9 111 aa21.46■■□□□ 1.03
NXF1-216ENST00000533499 IQSEC3Q9UPP2 1182 aaPredicted RBP21.46■■□□□ 1.03
NXF1-216ENST00000533499 ZNF609O15014 1411 aa21.46■■□□□ 1.03
NXF1-216ENST00000533499 ECE2O60344 883 aa21.45■■□□□ 1.02
NXF1-216ENST00000533499 BCAMP50895 628 aa21.45■■□□□ 1.02
NXF1-216ENST00000533499 ERICH6BQ5W0A0 696 aa21.45■■□□□ 1.02
NXF1-216ENST00000533499 EAF2Q96CJ1 260 aaPredicted RBP21.45■■□□□ 1.02
NXF1-216ENST00000533499 VPS33BQ9H267 617 aa21.45■■□□□ 1.02
NXF1-216ENST00000533499 GPR108Q9NPR9 543 aa21.45■■□□□ 1.02
NXF1-216ENST00000533499 PPP4R2Q9NY27 417 aa21.45■■□□□ 1.02
NXF1-216ENST00000533499 FAM84BQ96KN1 310 aaPredicted RBP21.44■■□□□ 1.02
NXF1-216ENST00000533499 DBNDD2Q9BQY9 259 aa21.44■■□□□ 1.02
NXF1-216ENST00000533499 CHD4Q14839 1912 aa21.43■■□□□ 1.02
NXF1-216ENST00000533499 SMC5Q8IY18 1101 aa21.43■■□□□ 1.02
NXF1-216ENST00000533499 COA1Q9GZY4 146 aa21.43■■□□□ 1.02
NXF1-216ENST00000533499 GNL3LQ9NVN8 582 aaKnown RBP21.43■■□□□ 1.02
NXF1-216ENST00000533499 TLR7Q9NYK1 1049 aaKnown RBP21.43■■□□□ 1.02
NXF1-216ENST00000533499 ZNRF3Q9ULT6 936 aa21.43■■□□□ 1.02
NXF1-216ENST00000533499 PHKA1P46020 1223 aa21.42■■□□□ 1.02
NXF1-216ENST00000533499 EIF6P56537 245 aaKnown RBP21.42■■□□□ 1.02
NXF1-216ENST00000533499 TTC39AQ5SRH9 613 aa21.42■■□□□ 1.02
NXF1-216ENST00000533499 C15orf52Q6ZUT6 534 aaKnown RBP21.42■■□□□ 1.02
NXF1-216ENST00000533499 LNPKQ9C0E8 428 aa21.42■■□□□ 1.02
NXF1-216ENST00000533499 CD209Q9NNX6 404 aa21.42■■□□□ 1.02
NXF1-216ENST00000533499 JAG2Q9Y219 1238 aa21.42■■□□□ 1.02
NXF1-216ENST00000533499 COL4A5P29400 1685 aa21.41■■□□□ 1.02
NXF1-216ENST00000533499 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
NXF1-216ENST00000533499 RAD17O75943 681 aa21.41■■□□□ 1.02
NXF1-216ENST00000533499 CHAF1AQ13111 956 aaPredicted RBP21.41■■□□□ 1.02
NXF1-216ENST00000533499 CCDC158Q5M9N0 1113 aa21.41■■□□□ 1.02
NXF1-216ENST00000533499 DBNLQ9UJU6 430 aaKnown RBP21.41■■□□□ 1.02
NXF1-216ENST00000533499 GJA3Q9Y6H8 435 aa21.41■■□□□ 1.02
NXF1-216ENST00000533499 DICER1Q9UPY3 1922 aaKnown RBP21.41■■□□□ 1.02
NXF1-216ENST00000533499 CCDC102BQ68D86 513 aa21.4■■□□□ 1.02
NXF1-216ENST00000533499 FBXO33Q7Z6M2 555 aa21.4■■□□□ 1.02
NXF1-216ENST00000533499 C16orf71Q8IYS4 520 aaPredicted RBP21.4■■□□□ 1.02
NXF1-216ENST00000533499 KCNQ5Q9NR82 932 aa21.4■■□□□ 1.02
NXF1-216ENST00000533499 TIAM2Q8IVF5 1701 aa21.39■■□□□ 1.01
NXF1-216ENST00000533499 ARAP2Q8WZ64 1704 aa21.39■■□□□ 1.01
NXF1-216ENST00000533499 PODNQ7Z5L7 613 aa21.39■■□□□ 1.01
NXF1-216ENST00000533499 YDJCA8MPS7 323 aa21.38■■□□□ 1.01
NXF1-216ENST00000533499 GTF2IP78347 998 aa21.38■■□□□ 1.01
NXF1-216ENST00000533499 CENPQQ7L2Z9 268 aaPredicted RBP21.38■■□□□ 1.01
NXF1-216ENST00000533499 CHD1LQ86WJ1 897 aa21.38■■□□□ 1.01
NXF1-216ENST00000533499 ZNF541Q9H0D2 1346 aa21.37■■□□□ 1.01
NXF1-216ENST00000533499 NUCB1Q02818 461 aa21.37■■□□□ 1.01
NXF1-216ENST00000533499 CIAPIN1Q6FI81 312 aa21.37■■□□□ 1.01
NXF1-216ENST00000533499 GPATCH3Q96I76 525 aa21.37■■□□□ 1.01
NXF1-216ENST00000533499 UQCRFS1P1P0C7P4 283 aa21.36■■□□□ 1.01
NXF1-216ENST00000533499 IL1R1P14778 569 aa21.36■■□□□ 1.01
NXF1-216ENST00000533499 CXCL9Q07325 125 aa21.36■■□□□ 1.01
NXF1-216ENST00000533499 TDRD7Q8NHU6 1098 aaKnown RBP21.36■■□□□ 1.01
NXF1-216ENST00000533499 OTUD7AQ8TE49 926 aaPredicted RBP21.36■■□□□ 1.01
NXF1-216ENST00000533499 SNRKQ9NRH2 765 aa21.36■■□□□ 1.01
NXF1-216ENST00000533499 USP17L3A6NCW0 530 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 USP17L4A6NCW7 530 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 FZD9O00144 591 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 TNIP1Q15025 636 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 TSHZ3Q63HK5 1081 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 TTLL5Q6EMB2 1281 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 DPY19L2Q6NUT2 758 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 USP17L1Q7RTZ2 530 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 MYH13Q9UKX3 1938 aa21.35■■□□□ 1.01
NXF1-216ENST00000533499 SCN9AQ15858 1988 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms