RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 COA1Q9GZY4 146 aa19.55■□□□□ 0.72
CPSF1-211ENST00000533492 USP17L8P0C7I0 530 aa19.54■□□□□ 0.72
CPSF1-211ENST00000533492 SLFN5Q08AF3 891 aa19.54■□□□□ 0.72
CPSF1-211ENST00000533492 CCDC57Q2TAC2 916 aa19.54■□□□□ 0.72
CPSF1-211ENST00000533492 CYP4F22Q6NT55 531 aa19.54■□□□□ 0.72
CPSF1-211ENST00000533492 ZNF280AP59817 542 aaPredicted RBP19.53■□□□□ 0.72
CPSF1-211ENST00000533492 MAP2K1Q02750 393 aaPredicted RBP19.53■□□□□ 0.72
CPSF1-211ENST00000533492 SAPCD2Q86UD0 394 aa19.53■□□□□ 0.72
CPSF1-211ENST00000533492 MRPL50Q8N5N7 158 aaKnown RBP19.53■□□□□ 0.72
CPSF1-211ENST00000533492 POLR2AP24928 1970 aaKnown RBP19.53■□□□□ 0.72
CPSF1-211ENST00000533492 CCER2I3L3R5 266 aa19.52■□□□□ 0.72
CPSF1-211ENST00000533492 FOXN1O15353 648 aa19.52■□□□□ 0.72
CPSF1-211ENST00000533492 EPHA10Q5JZY3 1008 aa19.52■□□□□ 0.72
CPSF1-211ENST00000533492 TXNRD3Q86VQ6 643 aa19.52■□□□□ 0.72
CPSF1-211ENST00000533492 SULF1Q8IWU6 871 aa19.52■□□□□ 0.72
CPSF1-211ENST00000533492 TNS4Q8IZW8 715 aa19.52■□□□□ 0.72
CPSF1-211ENST00000533492 WBP1LQ9NX94 342 aa19.52■□□□□ 0.72
CPSF1-211ENST00000533492 TAF5LO75529 589 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 CTCFP49711 727 aaPredicted RBP19.51■□□□□ 0.71
CPSF1-211ENST00000533492 SCARF1Q14162 830 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 STRIP1Q5VSL9 837 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 OGFOD1Q8N543 542 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 HELBQ8NG08 1087 aaPredicted RBP19.51■□□□□ 0.71
CPSF1-211ENST00000533492 GMLQ99445 158 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 MYOZ2Q9NPC6 264 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 GGA3Q9NZ52 723 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 PTPRCP08575 1304 aa19.51■□□□□ 0.71
CPSF1-211ENST00000533492 DACT2Q5SW24 774 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 TTLL5Q6EMB2 1281 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 DLK2Q6UY11 383 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 LDHAL6AQ6ZMR3 332 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 SSH1Q8WYL5 1049 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 CDCA7LQ96GN5 454 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 HHIPL1Q96JK4 782 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 BEGAINQ9BUH8 593 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 PSME4Q14997 1843 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 ZNF609O15014 1411 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 MYO3BQ8WXR4 1341 aa19.5■□□□□ 0.71
CPSF1-211ENST00000533492 ADM5C9JUS6 153 aa19.49■□□□□ 0.71
CPSF1-211ENST00000533492 PLIN1O60240 522 aa19.49■□□□□ 0.71
CPSF1-211ENST00000533492 KLRK1P26718 216 aa19.49■□□□□ 0.71
CPSF1-211ENST00000533492 C2orf69Q8N8R5 385 aa19.49■□□□□ 0.71
CPSF1-211ENST00000533492 ZNF594Q96JF6 807 aaPredicted RBP19.49■□□□□ 0.71
CPSF1-211ENST00000533492 MXD3Q9BW11 206 aa19.49■□□□□ 0.71
CPSF1-211ENST00000533492 SNAP23O00161 211 aa19.48■□□□□ 0.71
CPSF1-211ENST00000533492 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
CPSF1-211ENST00000533492 HUNKP57058 714 aa19.48■□□□□ 0.71
CPSF1-211ENST00000533492 ANGEL2Q5VTE6 544 aaKnown RBP19.48■□□□□ 0.71
CPSF1-211ENST00000533492 SUCLG2Q96I99 432 aa19.48■□□□□ 0.71
CPSF1-211ENST00000533492 ASTN2O75129 1339 aaPredicted RBP19.48■□□□□ 0.71
CPSF1-211ENST00000533492 MAP2K2P36507 400 aa19.47■□□□□ 0.71
CPSF1-211ENST00000533492 GTF2IP78347 998 aa19.47■□□□□ 0.71
CPSF1-211ENST00000533492 ALDH1L2Q3SY69 923 aa19.47■□□□□ 0.71
CPSF1-211ENST00000533492 GBA2Q9HCG7 927 aaPredicted RBP19.47■□□□□ 0.71
CPSF1-211ENST00000533492 CD209Q9NNX6 404 aa19.47■□□□□ 0.71
CPSF1-211ENST00000533492 AOC2O75106 756 aa19.46■□□□□ 0.71
CPSF1-211ENST00000533492 MMP14P50281 582 aa19.46■□□□□ 0.71
CPSF1-211ENST00000533492 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
CPSF1-211ENST00000533492 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
CPSF1-211ENST00000533492 HDAC9Q9UKV0 1011 aa19.46■□□□□ 0.71
CPSF1-211ENST00000533492 LBX1P52954 281 aa19.45■□□□□ 0.7
CPSF1-211ENST00000533492 C15orf52Q6ZUT6 534 aaKnown RBP19.45■□□□□ 0.7
CPSF1-211ENST00000533492 ZNF804AQ7Z570 1209 aa19.45■□□□□ 0.7
CPSF1-211ENST00000533492 UTYO14607 1347 aa19.45■□□□□ 0.7
CPSF1-211ENST00000533492 KIAA0825Q8IV33 1275 aa19.44■□□□□ 0.7
CPSF1-211ENST00000533492 TRMT2AQ8IZ69 625 aaKnown RBP19.44■□□□□ 0.7
CPSF1-211ENST00000533492 CDCA5Q96FF9 252 aa19.44■□□□□ 0.7
CPSF1-211ENST00000533492 KAZALD1Q96I82 304 aa19.44■□□□□ 0.7
CPSF1-211ENST00000533492 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
CPSF1-211ENST00000533492 PITPNM2Q9BZ72 1349 aa19.44■□□□□ 0.7
CPSF1-211ENST00000533492 CT47B1P0C2W7 299 aaPredicted RBP19.43■□□□□ 0.7
CPSF1-211ENST00000533492 NBPF9Q3BBW0 867 aa19.43■□□□□ 0.7
CPSF1-211ENST00000533492 HSPA8P11142 646 aaKnown RBP19.42■□□□□ 0.7
CPSF1-211ENST00000533492 RGMBQ6NW40 437 aa19.42■□□□□ 0.7
CPSF1-211ENST00000533492 WNT10BO00744 389 aa19.41■□□□□ 0.7
CPSF1-211ENST00000533492 IL1R1P14778 569 aa19.41■□□□□ 0.7
CPSF1-211ENST00000533492 NOGQ13253 232 aa19.41■□□□□ 0.7
CPSF1-211ENST00000533492 UBE4AQ14139 1066 aa19.41■□□□□ 0.7
CPSF1-211ENST00000533492 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-211ENST00000533492 CCDC102AQ96A19 550 aa19.41■□□□□ 0.7
CPSF1-211ENST00000533492 PUS3Q9BZE2 481 aaKnown RBP19.41■□□□□ 0.7
CPSF1-211ENST00000533492 USP44Q9H0E7 712 aa19.41■□□□□ 0.7
CPSF1-211ENST00000533492 SCAF8Q9UPN6 1271 aaKnown RBP19.41■□□□□ 0.7
CPSF1-211ENST00000533492 IRS2Q9Y4H2 1338 aa19.41■□□□□ 0.7
CPSF1-211ENST00000533492 CAPN15O75808 1086 aa19.4■□□□□ 0.7
CPSF1-211ENST00000533492 SASH1O94885 1247 aa19.4■□□□□ 0.7
CPSF1-211ENST00000533492 ZNF157P51786 506 aaPredicted RBP19.4■□□□□ 0.7
CPSF1-211ENST00000533492 MROH5Q6ZUA9 1318 aa19.4■□□□□ 0.7
CPSF1-211ENST00000533492 BRPF1P55201 1214 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-211ENST00000533492 ANKRD44Q8N8A2 993 aa19.39■□□□□ 0.69
CPSF1-211ENST00000533492 RIPOR2Q9Y4F9 1068 aa19.39■□□□□ 0.69
CPSF1-211ENST00000533492 THSD7BQ9C0I4 1608 aa19.39■□□□□ 0.69
CPSF1-211ENST00000533492 CA12O43570 354 aa19.38■□□□□ 0.69
CPSF1-211ENST00000533492 HIBADHP31937 336 aaKnown RBP19.38■□□□□ 0.69
CPSF1-211ENST00000533492 FKBP1BP68106 108 aa19.38■□□□□ 0.69
CPSF1-211ENST00000533492 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
CPSF1-211ENST00000533492 METTL24Q5JXM2 366 aa19.38■□□□□ 0.69
CPSF1-211ENST00000533492 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
CPSF1-211ENST00000533492 A0A1B0GUL6 1792 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms