RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CEBPZQ03701 1054 aaKnown RBP19.47■□□□□ 0.71
CTSB-228ENST00000533455 APOBRQ0VD83 1088 aa19.47■□□□□ 0.71
CTSB-228ENST00000533455 GPR108Q9NPR9 543 aa19.47■□□□□ 0.71
CTSB-228ENST00000533455 ZMYM1Q5SVZ6 1142 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 CEP135Q66GS9 1140 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 NYAP1Q6ZVC0 841 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 RAPGEF4Q8WZA2 1011 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 ZNF274Q96GC6 653 aaPredicted RBP19.46■□□□□ 0.71
CTSB-228ENST00000533455 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 FTOQ9C0B1 505 aaKnown RBP eCLIP19.46■□□□□ 0.713e-19■□□□□ 9.3
CTSB-228ENST00000533455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.46■□□□□ 0.71
CTSB-228ENST00000533455 CGNQ9P2M7 1197 aaKnown RBP19.46■□□□□ 0.71
CTSB-228ENST00000533455 TJP1Q07157 1748 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
CTSB-228ENST00000533455 BECN2A8MW95 431 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
CTSB-228ENST00000533455 CEP57L1Q8IYX8 460 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 FBXL16Q8N461 479 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 PAG1Q9NWQ8 432 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 OGFRQ9NZT2 677 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 CTNNA3Q9UI47 895 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 DDX60Q8IY21 1712 aaKnown RBP19.45■□□□□ 0.7
CTSB-228ENST00000533455 MEGF6O75095 1541 aa19.45■□□□□ 0.7
CTSB-228ENST00000533455 A0A087WZG4 1122 aa19.44■□□□□ 0.7
CTSB-228ENST00000533455 CCZ1BP86790 482 aa19.44■□□□□ 0.7
CTSB-228ENST00000533455 CCZ1P86791 482 aaPredicted RBP19.44■□□□□ 0.7
CTSB-228ENST00000533455 FSIP1Q8NA03 581 aa19.44■□□□□ 0.7
CTSB-228ENST00000533455 SPDYE4A6NLX3 237 aa19.44■□□□□ 0.7
CTSB-228ENST00000533455 E7EWF7 191 aa19.44■□□□□ 0.7
CTSB-228ENST00000533455 TATP17735 454 aaPredicted RBP19.44■□□□□ 0.7
CTSB-228ENST00000533455 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
CTSB-228ENST00000533455 PARP4Q9UKK3 1724 aaKnown RBP19.43■□□□□ 0.7
CTSB-228ENST00000533455 COL18A1P39060 1754 aa19.43■□□□□ 0.7
CTSB-228ENST00000533455 PDIA3P30101 505 aaKnown RBP19.43■□□□□ 0.7
CTSB-228ENST00000533455 FMR1NBQ8N0W7 255 aaPredicted RBP19.43■□□□□ 0.7
CTSB-228ENST00000533455 PLBD2Q8NHP8 589 aa19.43■□□□□ 0.7
CTSB-228ENST00000533455 A0A1W2PQ27 194 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 A0A1W2PQ64 194 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 A0A1W2PQD8 194 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 CCDC69A6NI79 296 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 SKILP12757 684 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 EVCP57679 992 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 ARID5BQ14865 1188 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 ATG9AQ7Z3C6 839 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 IFNL2Q8IZJ0 200 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 MRPS27Q92552 414 aaKnown RBP19.42■□□□□ 0.7
CTSB-228ENST00000533455 FMNL2Q96PY5 1086 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 NAT10Q9H0A0 1025 aaKnown RBP19.42■□□□□ 0.7
CTSB-228ENST00000533455 RTEL1Q9NZ71 1219 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 USP27XA6NNY8 438 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 GOLIM4O00461 696 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 HSPD1P10809 573 aaKnown RBP19.42■□□□□ 0.7
CTSB-228ENST00000533455 FOSBP53539 338 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 GSDMDP57764 484 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 CCT2P78371 535 aaKnown RBP19.42■□□□□ 0.7
CTSB-228ENST00000533455 FOXO4P98177 505 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 TTC5Q8N0Z6 440 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 OSBPL5Q9H0X9 879 aaPredicted RBP19.42■□□□□ 0.7
CTSB-228ENST00000533455 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
CTSB-228ENST00000533455 MAST3O60307 1309 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 ATP5J2-PTCD1G3V325 749 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 H7C1W4 665 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 PTCD1O75127 700 aaKnown RBP19.41■□□□□ 0.7
CTSB-228ENST00000533455 ME1P48163 572 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 PTPN14Q15678 1187 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 ADALQ6DHV7 355 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 LMOD2Q6P5Q4 547 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 BPIFA3Q9BQP9 254 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 KIF20AO95235 890 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 AOPEPQ8N6M6 819 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 NCOA5Q9HCD5 579 aaKnown RBP19.41■□□□□ 0.7
CTSB-228ENST00000533455 IMPACTQ9P2X3 320 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 PCDHA7Q9UN72 937 aa19.41■□□□□ 0.7
CTSB-228ENST00000533455 CCAR2Q8N163 923 aaKnown RBP19.4■□□□□ 0.7
CTSB-228ENST00000533455 DCAF5Q96JK2 942 aa19.4■□□□□ 0.7
CTSB-228ENST00000533455 DDX41Q9UJV9 622 aaKnown RBP19.4■□□□□ 0.7
CTSB-228ENST00000533455 KIF2AO00139 706 aaPredicted RBP19.39■□□□□ 0.69
CTSB-228ENST00000533455 RNF113AO15541 343 aaKnown RBP19.39■□□□□ 0.69
CTSB-228ENST00000533455 FDPSP14324 419 aaKnown RBP19.39■□□□□ 0.69
CTSB-228ENST00000533455 IL15P40933 162 aaPredicted RBP19.39■□□□□ 0.69
CTSB-228ENST00000533455 PIP4K2AP48426 406 aaPredicted RBP19.39■□□□□ 0.69
CTSB-228ENST00000533455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTSB-228ENST00000533455 A0A0G2JLW4 131 aa19.39■□□□□ 0.69
CTSB-228ENST00000533455 SLFNL1Q499Z3 407 aa19.39■□□□□ 0.69
CTSB-228ENST00000533455 ZHX1Q9UKY1 873 aaPredicted RBP19.39■□□□□ 0.69
CTSB-228ENST00000533455 YEATS4O95619 227 aa19.38■□□□□ 0.69
CTSB-228ENST00000533455 FILIP1Q7Z7B0 1213 aa19.38■□□□□ 0.69
CTSB-228ENST00000533455 NBPF11Q86T75 865 aa19.38■□□□□ 0.69
CTSB-228ENST00000533455 LINC00301Q8NCQ3 95 aa19.38■□□□□ 0.69
CTSB-228ENST00000533455 NEUROD6Q96NK8 337 aa19.38■□□□□ 0.69
CTSB-228ENST00000533455 NLRP2Q9NX02 1062 aa19.38■□□□□ 0.69
CTSB-228ENST00000533455 GUCY1B3Q02153 619 aa19.37■□□□□ 0.69
CTSB-228ENST00000533455 NAA30Q147X3 362 aaPredicted RBP19.37■□□□□ 0.69
CTSB-228ENST00000533455 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
CTSB-228ENST00000533455 NEDD4P46934 1319 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms