RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 CCDC158Q5M9N0 1113 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 TTC22Q5TAA0 569 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 MPNDQ8N594 471 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 BCL11AQ9H165 835 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 GGA1Q9UJY5 639 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 AKAP11Q9UKA4 1901 aa17.23■□□□□ 0.35
HIF3A-215ENST00000533145 ADORA1P30542 326 aa17.23■□□□□ 0.35
HIF3A-215ENST00000533145 BMP2KLQ5H9B9 411 aa17.23■□□□□ 0.35
HIF3A-215ENST00000533145 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-215ENST00000533145 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
HIF3A-215ENST00000533145 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-215ENST00000533145 KCNJ4P48050 445 aa17.22■□□□□ 0.35
HIF3A-215ENST00000533145 GORABQ5T7V8 394 aa17.22■□□□□ 0.35
HIF3A-215ENST00000533145 SOGA3Q5TF21 947 aa17.22■□□□□ 0.35
HIF3A-215ENST00000533145 FBXO33Q7Z6M2 555 aa17.22■□□□□ 0.35
HIF3A-215ENST00000533145 SLC51AQ86UW1 340 aa17.22■□□□□ 0.35
HIF3A-215ENST00000533145 TBC1D16Q8TBP0 767 aa17.22■□□□□ 0.35
HIF3A-215ENST00000533145 PPP1R1BQ9UD71 204 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-215ENST00000533145 POLLQ9UGP5 575 aa17.22■□□□□ 0.35
HIF3A-215ENST00000533145 DUOX1Q9NRD9 1551 aa17.21■□□□□ 0.35
HIF3A-215ENST00000533145 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
HIF3A-215ENST00000533145 ARID4AP29374 1257 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-215ENST00000533145 CAVIN4Q5BKX8 364 aa17.21■□□□□ 0.35
HIF3A-215ENST00000533145 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
HIF3A-215ENST00000533145 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
HIF3A-215ENST00000533145 RTKN2Q8IZC4 609 aa17.21■□□□□ 0.35
HIF3A-215ENST00000533145 FAM84BQ96KN1 310 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-215ENST00000533145 AK9Q5TCS8 1911 aa17.2■□□□□ 0.34
HIF3A-215ENST00000533145 MED23Q9ULK4 1368 aa17.2■□□□□ 0.34
HIF3A-215ENST00000533145 UFL1O94874 794 aa17.2■□□□□ 0.34
HIF3A-215ENST00000533145 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
HIF3A-215ENST00000533145 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
HIF3A-215ENST00000533145 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
HIF3A-215ENST00000533145 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
HIF3A-215ENST00000533145 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-215ENST00000533145 FHDC1Q9C0D6 1143 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-215ENST00000533145 FER1L6Q2WGJ9 1857 aa17.2■□□□□ 0.34
HIF3A-215ENST00000533145 C21orf2O43822 256 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 PHKA1P46020 1223 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 BCAMP50895 628 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 NLGN2Q8NFZ4 835 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 HAUS7Q99871 368 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 SYT17Q9BSW7 474 aa17.19■□□□□ 0.34
HIF3A-215ENST00000533145 MYH13Q9UKX3 1938 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 C6orf229H3BNL8 230 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 HIBADHP31937 336 aaKnown RBP17.18■□□□□ 0.34
HIF3A-215ENST00000533145 GYG1P46976 350 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 TXNRD3Q86VQ6 643 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 PSMD1Q99460 953 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 EYA3Q99504 573 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 VPS33BQ9H267 617 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 BOLA2Q9H3K6 86 aa17.18■□□□□ 0.34
HIF3A-215ENST00000533145 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
HIF3A-215ENST00000533145 SEMA3EO15041 775 aa17.17■□□□□ 0.34
HIF3A-215ENST00000533145 KLRK1P26718 216 aa17.17■□□□□ 0.34
HIF3A-215ENST00000533145 PDS5AQ29RF7 1337 aaKnown RBP17.17■□□□□ 0.34
HIF3A-215ENST00000533145 SDSP20132 328 aa17.16■□□□□ 0.34
HIF3A-215ENST00000533145 MCAMP43121 646 aa17.16■□□□□ 0.34
HIF3A-215ENST00000533145 ZNF804AQ7Z570 1209 aa17.16■□□□□ 0.34
HIF3A-215ENST00000533145 VPS37DQ86XT2 251 aa17.16■□□□□ 0.34
HIF3A-215ENST00000533145 TDRD7Q8NHU6 1098 aaKnown RBP17.16■□□□□ 0.34
HIF3A-215ENST00000533145 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
HIF3A-215ENST00000533145 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
HIF3A-215ENST00000533145 IL1R1P14778 569 aa17.15■□□□□ 0.34
HIF3A-215ENST00000533145 SCARF1Q14162 830 aa17.15■□□□□ 0.34
HIF3A-215ENST00000533145 WASHC4Q2M389 1173 aa17.15■□□□□ 0.34
HIF3A-215ENST00000533145 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
HIF3A-215ENST00000533145 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
HIF3A-215ENST00000533145 COA1Q9GZY4 146 aa17.15■□□□□ 0.34
HIF3A-215ENST00000533145 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
HIF3A-215ENST00000533145 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
HIF3A-215ENST00000533145 CHD4Q14839 1912 aa17.15■□□□□ 0.34
HIF3A-215ENST00000533145 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
HIF3A-215ENST00000533145 FKBP4Q02790 459 aaKnown RBP eCLIP17.14■□□□□ 0.33
HIF3A-215ENST00000533145 RASGRF1Q13972 1273 aa17.14■□□□□ 0.33
HIF3A-215ENST00000533145 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
HIF3A-215ENST00000533145 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
HIF3A-215ENST00000533145 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
HIF3A-215ENST00000533145 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
HIF3A-215ENST00000533145 ZAP70P43403 619 aa17.13■□□□□ 0.33
HIF3A-215ENST00000533145 KIAA2012Q0VF49 1180 aa17.13■□□□□ 0.33
HIF3A-215ENST00000533145 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
HIF3A-215ENST00000533145 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
HIF3A-215ENST00000533145 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
HIF3A-215ENST00000533145 LTBP3Q9NS15 1303 aa17.13■□□□□ 0.33
HIF3A-215ENST00000533145 DOCK2Q92608 1830 aa17.12■□□□□ 0.33
HIF3A-215ENST00000533145 MYO5AQ9Y4I1 1855 aaKnown RBP17.12■□□□□ 0.33
HIF3A-215ENST00000533145 MYH7P12883 1935 aa17.12■□□□□ 0.33
HIF3A-215ENST00000533145 IGSF3O75054 1194 aa17.12■□□□□ 0.33
HIF3A-215ENST00000533145 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
HIF3A-215ENST00000533145 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
HIF3A-215ENST00000533145 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
HIF3A-215ENST00000533145 RIMBP2O15034 1052 aa17.11■□□□□ 0.33
HIF3A-215ENST00000533145 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
HIF3A-215ENST00000533145 PODNQ7Z5L7 613 aa17.11■□□□□ 0.33
HIF3A-215ENST00000533145 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms