RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 API5Q9BZZ5 524 aaKnown RBP38.13■■■■□ 3.69
SSSCA1-207ENST00000533115 CNNM1Q9NRU3 951 aa38.13■■■■□ 3.69
SSSCA1-207ENST00000533115 TBC1D10BQ4KMP7 808 aaPredicted RBP38.12■■■■□ 3.69
SSSCA1-207ENST00000533115 A0A1B0GUL6 1792 aa38.11■■■■□ 3.69
SSSCA1-207ENST00000533115 ANKRD44Q8N8A2 993 aa38.11■■■■□ 3.69
SSSCA1-207ENST00000533115 SNAP23O00161 211 aa38.1■■■■□ 3.69
SSSCA1-207ENST00000533115 FMR1Q06787 632 aaKnown RBP eCLIP38.1■■■■□ 3.69
SSSCA1-207ENST00000533115 MKRN1Q9UHC7 482 aaKnown RBP38.1■■■■□ 3.69
SSSCA1-207ENST00000533115 TRAF5O00463 557 aa38.09■■■■□ 3.69
SSSCA1-207ENST00000533115 EGFRP00533 1210 aa38.09■■■■□ 3.69
SSSCA1-207ENST00000533115 GMLQ99445 158 aa38.09■■■■□ 3.69
SSSCA1-207ENST00000533115 RBM26Q5T8P6 1007 aaKnown RBP38.08■■■■□ 3.69
SSSCA1-207ENST00000533115 KIF16BQ96L93 1317 aa38.08■■■■□ 3.69
SSSCA1-207ENST00000533115 IRS2Q9Y4H2 1338 aa38.08■■■■□ 3.69
SSSCA1-207ENST00000533115 C15orf52Q6ZUT6 534 aaKnown RBP38.07■■■■□ 3.68
SSSCA1-207ENST00000533115 GLIS2Q9BZE0 524 aaPredicted RBP38.07■■■■□ 3.68
SSSCA1-207ENST00000533115 CNTNAP1P78357 1384 aa38.06■■■■□ 3.68
SSSCA1-207ENST00000533115 PLIN1O60240 522 aa38.06■■■■□ 3.68
SSSCA1-207ENST00000533115 ZNF280AP59817 542 aaPredicted RBP38.06■■■■□ 3.68
SSSCA1-207ENST00000533115 KIF4BQ2VIQ3 1234 aa38.06■■■■□ 3.68
SSSCA1-207ENST00000533115 STRIP1Q5VSL9 837 aa38.06■■■■□ 3.68
SSSCA1-207ENST00000533115 ARHGAP45Q92619 1136 aa38.06■■■■□ 3.68
SSSCA1-207ENST00000533115 DACT2Q5SW24 774 aa38.05■■■■□ 3.68
SSSCA1-207ENST00000533115 CDC37L1Q7L3B6 337 aa38.05■■■■□ 3.68
SSSCA1-207ENST00000533115 FBXW7Q969H0 707 aa38.05■■■■□ 3.68
SSSCA1-207ENST00000533115 PUS3Q9BZE2 481 aaKnown RBP38.05■■■■□ 3.68
SSSCA1-207ENST00000533115 USP17L8P0C7I0 530 aa38.04■■■■□ 3.68
SSSCA1-207ENST00000533115 TRPM7Q96QT4 1865 aa38.03■■■■□ 3.68
SSSCA1-207ENST00000533115 CD209Q9NNX6 404 aa38.03■■■■□ 3.68
SSSCA1-207ENST00000533115 CST9Q5W186 159 aa38.02■■■■□ 3.68
SSSCA1-207ENST00000533115 MXD3Q9BW11 206 aa38.02■■■■□ 3.68
SSSCA1-207ENST00000533115 PCNTO95613 3336 aa38.02■■■■□ 3.68
SSSCA1-207ENST00000533115 ZNF646O15015 1829 aaPredicted RBP38.02■■■■□ 3.68
SSSCA1-207ENST00000533115 TTLL5Q6EMB2 1281 aa38.01■■■■□ 3.68
SSSCA1-207ENST00000533115 ABT1Q9ULW3 272 aaKnown RBP38.01■■■■□ 3.68
SSSCA1-207ENST00000533115 RIPOR2Q9Y4F9 1068 aa38.01■■■■□ 3.68
SSSCA1-207ENST00000533115 MYO3BQ8WXR4 1341 aa38.01■■■■□ 3.68
SSSCA1-207ENST00000533115 MROH5Q6ZUA9 1318 aa37.99■■■■□ 3.67
SSSCA1-207ENST00000533115 RASSF10A6NK89 507 aa37.99■■■■□ 3.67
SSSCA1-207ENST00000533115 UBTFL1P0CB47 393 aaPredicted RBP37.99■■■■□ 3.67
SSSCA1-207ENST00000533115 ZNF804AQ7Z570 1209 aa37.99■■■■□ 3.67
SSSCA1-207ENST00000533115 USP48Q86UV5 1035 aa37.99■■■■□ 3.67
SSSCA1-207ENST00000533115 MYOZ2Q9NPC6 264 aa37.99■■■■□ 3.67
SSSCA1-207ENST00000533115 GTF2IP78347 998 aa37.98■■■■□ 3.67
SSSCA1-207ENST00000533115 DCPSQ96C86 337 aaKnown RBP37.98■■■■□ 3.67
SSSCA1-207ENST00000533115 IPO8O15397 1037 aaKnown RBP37.97■■■■□ 3.67
SSSCA1-207ENST00000533115 BCAR3O75815 825 aa37.97■■■■□ 3.67
SSSCA1-207ENST00000533115 CELF2O95319 508 aaKnown RBP37.97■■■■□ 3.67
SSSCA1-207ENST00000533115 UBE4AQ14139 1066 aa37.97■■■■□ 3.67
SSSCA1-207ENST00000533115 DEFB115Q30KQ5 88 aa37.97■■■■□ 3.67
SSSCA1-207ENST00000533115 LRRC24Q50LG9 513 aa37.96■■■■□ 3.67
SSSCA1-207ENST00000533115 ZBED9Q6R2W3 1325 aa37.95■■■■□ 3.67
SSSCA1-207ENST00000533115 IL1R1P14778 569 aa37.95■■■■□ 3.67
SSSCA1-207ENST00000533115 VEGFBP49765 207 aa37.95■■■■□ 3.67
SSSCA1-207ENST00000533115 SCARF1Q14162 830 aa37.95■■■■□ 3.67
SSSCA1-207ENST00000533115 INTS3Q68E01 1043 aaKnown RBP37.95■■■■□ 3.67
SSSCA1-207ENST00000533115 KRT26Q7Z3Y9 468 aa37.95■■■■□ 3.67
SSSCA1-207ENST00000533115 KLHDC4Q8TBB5 520 aa37.95■■■■□ 3.67
SSSCA1-207ENST00000533115 OGFOD1Q8N543 542 aa37.94■■■■□ 3.66
SSSCA1-207ENST00000533115 GGA3Q9NZ52 723 aa37.94■■■■□ 3.66
SSSCA1-207ENST00000533115 POLR2AP24928 1970 aaKnown RBP37.93■■■■□ 3.66
SSSCA1-207ENST00000533115 ASTN2O75129 1339 aaPredicted RBP37.93■■■■□ 3.66
SSSCA1-207ENST00000533115 FRAT1Q92837 279 aaPredicted RBP37.93■■■■□ 3.66
SSSCA1-207ENST00000533115 HDAC5Q9UQL6 1122 aa37.93■■■■□ 3.66
SSSCA1-207ENST00000533115 RFX5P48382 616 aaPredicted RBP37.92■■■■□ 3.66
SSSCA1-207ENST00000533115 MMP14P50281 582 aa37.92■■■■□ 3.66
SSSCA1-207ENST00000533115 METTL24Q5JXM2 366 aa37.92■■■■□ 3.66
SSSCA1-207ENST00000533115 ZNF408Q9H9D4 720 aa37.92■■■■□ 3.66
SSSCA1-207ENST00000533115 TLL2Q9Y6L7 1015 aa37.92■■■■□ 3.66
SSSCA1-207ENST00000533115 TRIM27P14373 513 aa37.91■■■■□ 3.66
SSSCA1-207ENST00000533115 DLK2Q6UY11 383 aa37.91■■■■□ 3.66
SSSCA1-207ENST00000533115 ATF7IPQ6VMQ6 1270 aa37.91■■■■□ 3.66
SSSCA1-207ENST00000533115 ADM5C9JUS6 153 aa37.9■■■■□ 3.66
SSSCA1-207ENST00000533115 MEIS3Q99687 375 aa37.9■■■■□ 3.66
SSSCA1-207ENST00000533115 LRRFIP2Q9Y608 721 aaKnown RBP37.9■■■■□ 3.66
SSSCA1-207ENST00000533115 ANGEL2Q5VTE6 544 aaKnown RBP37.89■■■■□ 3.66
SSSCA1-207ENST00000533115 KIAA0825Q8IV33 1275 aa37.89■■■■□ 3.66
SSSCA1-207ENST00000533115 SULF1Q8IWU6 871 aa37.89■■■■□ 3.66
SSSCA1-207ENST00000533115 PTPN12Q05209 780 aaKnown RBP37.88■■■■□ 3.65
SSSCA1-207ENST00000533115 VGLL2Q8N8G2 317 aa37.88■■■■□ 3.65
SSSCA1-207ENST00000533115 PDE8BO95263 885 aa37.87■■■■□ 3.65
SSSCA1-207ENST00000533115 HIBADHP31937 336 aaKnown RBP37.87■■■■□ 3.65
SSSCA1-207ENST00000533115 GYG1P46976 350 aa37.87■■■■□ 3.65
SSSCA1-207ENST00000533115 FAM84BQ96KN1 310 aaPredicted RBP37.87■■■■□ 3.65
SSSCA1-207ENST00000533115 HDAC9Q9UKV0 1011 aa37.87■■■■□ 3.65
SSSCA1-207ENST00000533115 TNNQ9UQP3 1299 aa37.87■■■■□ 3.65
SSSCA1-207ENST00000533115 EYA2O00167 538 aa37.86■■■■□ 3.65
SSSCA1-207ENST00000533115 HSPA1AP0DMV8 641 aaKnown RBP37.86■■■■□ 3.65
SSSCA1-207ENST00000533115 HSPA1BP0DMV9 641 aaKnown RBP37.86■■■■□ 3.65
SSSCA1-207ENST00000533115 SAPCD2Q86UD0 394 aa37.86■■■■□ 3.65
SSSCA1-207ENST00000533115 CERS5Q8N5B7 392 aa37.86■■■■□ 3.65
SSSCA1-207ENST00000533115 WDR33Q9C0J8 1336 aaKnown RBP37.86■■■■□ 3.65
SSSCA1-207ENST00000533115 SASH1O94885 1247 aa37.85■■■■□ 3.65
SSSCA1-207ENST00000533115 GNAI3P08754 354 aa37.85■■■■□ 3.65
SSSCA1-207ENST00000533115 NBPF9Q3BBW0 867 aa37.85■■■■□ 3.65
SSSCA1-207ENST00000533115 TDRD7Q8NHU6 1098 aaKnown RBP37.85■■■■□ 3.65
SSSCA1-207ENST00000533115 PITPNM2Q9BZ72 1349 aa37.85■■■■□ 3.65
SSSCA1-207ENST00000533115 FKBP1AP62942 108 aaKnown RBP37.84■■■■□ 3.65
SSSCA1-207ENST00000533115 PAXIP1Q6ZW49 1069 aaPredicted RBP37.84■■■■□ 3.65
SSSCA1-207ENST00000533115 ZKSCAN2Q63HK3 967 aa37.83■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms