RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 VPS37DQ86XT2 251 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 COA1Q9GZY4 146 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 GPR108Q9NPR9 543 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 ZNRF3Q9ULT6 936 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 LRRC37AA6NMS7 1700 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 A0A1B0GUL7 405 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 APBB1O00213 710 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 KLRK1P26718 216 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 EIF6P56537 245 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 DPY19L2Q6NUT2 758 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 ZNF804AQ7Z570 1209 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 PODNQ7Z5L7 613 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 RHPN1Q8TCX5 695 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 DBNDD1Q9H9R9 158 aa13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-211ENST00000533012 FZD9O00144 591 aa13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 ECE2O60344 883 aa13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 GYG1P46976 350 aa13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 FBXO33Q7Z6M2 555 aa13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 CLASRPQ8N2M8 674 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 GCC1Q96CN9 775 aa13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 FAM84BQ96KN1 310 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 CD209Q9NNX6 404 aa13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 FER1L6Q2WGJ9 1857 aa13.84□□□□□ -0.19
TRAPPC4-211ENST00000533012 BCAMP50895 628 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 TNNI3KQ59H18 835 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 GORABQ5T7V8 394 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 XAGE2Q96GT9 111 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 GNL3LQ9NVN8 582 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 FPGT-TNNI3KV9GXZ4 949 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 IRS2Q9Y4H2 1338 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 DUOX1Q9NRD9 1551 aa13.83□□□□□ -0.2
TRAPPC4-211ENST00000533012 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 IGHDP01880 384 aa13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 CXCL9Q07325 125 aa13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 TNIP1Q15025 636 aa13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 CIAPIN1Q6FI81 312 aa13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 BCL11AQ9H165 835 aa13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 IL1RAPL2Q9NP60 686 aa13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 SPEF2Q9C093 1822 aa13.82□□□□□ -0.2
TRAPPC4-211ENST00000533012 YDJCA8MPS7 323 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 RAD17O75943 681 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 IL1R1P14778 569 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 ADORA1P30542 326 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 CCDC158Q5M9N0 1113 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 AACSQ86V21 672 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 TDRD7Q8NHU6 1098 aaKnown RBP13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 EAF2Q96CJ1 260 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 CCDC8Q9H0W5 538 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
TRAPPC4-211ENST00000533012 USP17L3A6NCW0 530 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 USP17L4A6NCW7 530 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 GLTPD2A6NH11 291 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 CCDC102BQ68D86 513 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 TTLL5Q6EMB2 1281 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 USP17L1Q7RTZ2 530 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 KCNQ5Q9NR82 932 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 LTBP1Q14766 1721 aa13.8□□□□□ -0.2
TRAPPC4-211ENST00000533012 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 DDNO94850 711 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 YY1P25490 414 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 GTF2IP78347 998 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 STRIP1Q5VSL9 837 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 GPC2Q8N158 579 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
TRAPPC4-211ENST00000533012 PSMD14O00487 310 aa13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 VIL1P09327 827 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 PHKA1P46020 1223 aa13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 DBNLQ9UJU6 430 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 IQSEC3Q9UPP2 1182 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 ZNF541Q9H0D2 1346 aa13.78□□□□□ -0.2
TRAPPC4-211ENST00000533012 ZNF609O15014 1411 aa13.77□□□□□ -0.21
TRAPPC4-211ENST00000533012 SEMA3EO15041 775 aa13.77□□□□□ -0.21
TRAPPC4-211ENST00000533012 COL4A5P29400 1685 aa13.77□□□□□ -0.21
TRAPPC4-211ENST00000533012 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
TRAPPC4-211ENST00000533012 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.21
TRAPPC4-211ENST00000533012 FAM205AQ6ZU69 1335 aa13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 ZBTB22O15209 634 aa13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 CHAF1AQ13111 956 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 RSBN1LQ6PCB5 846 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 ZNF512BQ96KM6 892 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 TLR7Q9NYK1 1049 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-211ENST00000533012 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms