RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 MICALL2Q8IY33 904 aa19.27■□□□□ 0.68
CPSF1-210ENST00000532935 MEIS3Q99687 375 aa19.27■□□□□ 0.68
CPSF1-210ENST00000532935 PUS3Q9BZE2 481 aaKnown RBP19.27■□□□□ 0.68
CPSF1-210ENST00000532935 IRS2Q9Y4H2 1338 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 ZNF609O15014 1411 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 USP17L3A6NCW0 530 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 USP17L4A6NCW7 530 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 ITGBL1O95965 494 aaPredicted RBP19.26■□□□□ 0.67
CPSF1-210ENST00000532935 ZKSCAN2Q63HK3 967 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 RSBN1LQ6PCB5 846 aaPredicted RBP19.26■□□□□ 0.67
CPSF1-210ENST00000532935 USP17L1Q7RTZ2 530 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 CNTROBQ8N137 903 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 HDAC5Q9UQL6 1122 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 RIPOR2Q9Y4F9 1068 aa19.26■□□□□ 0.67
CPSF1-210ENST00000532935 PASKQ96RG2 1323 aa19.25■□□□□ 0.67
CPSF1-210ENST00000532935 C15orf52Q6ZUT6 534 aaKnown RBP19.25■□□□□ 0.67
CPSF1-210ENST00000532935 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
CPSF1-210ENST00000532935 TRPM4Q8TD43 1214 aa19.25■□□□□ 0.67
CPSF1-210ENST00000532935 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
CPSF1-210ENST00000532935 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
CPSF1-210ENST00000532935 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
CPSF1-210ENST00000532935 LRRC24Q50LG9 513 aa19.24■□□□□ 0.67
CPSF1-210ENST00000532935 AGBL3Q8NEM8 1001 aa19.24■□□□□ 0.67
CPSF1-210ENST00000532935 GNAI3P08754 354 aa19.23■□□□□ 0.67
CPSF1-210ENST00000532935 RFX5P48382 616 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-210ENST00000532935 HIRAP54198 1017 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-210ENST00000532935 SAMD7Q7Z3H4 446 aa19.23■□□□□ 0.67
CPSF1-210ENST00000532935 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
CPSF1-210ENST00000532935 UBE4AQ14139 1066 aa19.22■□□□□ 0.67
CPSF1-210ENST00000532935 METTL24Q5JXM2 366 aa19.22■□□□□ 0.67
CPSF1-210ENST00000532935 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
CPSF1-210ENST00000532935 STRIP1Q5VSL9 837 aa19.22■□□□□ 0.67
CPSF1-210ENST00000532935 DNAJC5GQ8N7S2 189 aa19.22■□□□□ 0.67
CPSF1-210ENST00000532935 FBXW7Q969H0 707 aa19.22■□□□□ 0.67
CPSF1-210ENST00000532935 GMLQ99445 158 aa19.22■□□□□ 0.67
CPSF1-210ENST00000532935 EGFRP00533 1210 aa19.21■□□□□ 0.67
CPSF1-210ENST00000532935 PTPN12Q05209 780 aaKnown RBP19.21■□□□□ 0.67
CPSF1-210ENST00000532935 TBC1D10BQ4KMP7 808 aaPredicted RBP19.21■□□□□ 0.67
CPSF1-210ENST00000532935 ZNF804AQ7Z570 1209 aa19.21■□□□□ 0.67
CPSF1-210ENST00000532935 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
CPSF1-210ENST00000532935 ZC3H15Q8WU90 426 aaKnown RBP19.21■□□□□ 0.67
CPSF1-210ENST00000532935 PGAP2Q9UHJ9 254 aa19.21■□□□□ 0.67
CPSF1-210ENST00000532935 ZNF280AP59817 542 aaPredicted RBP19.2■□□□□ 0.66
CPSF1-210ENST00000532935 TTLL5Q6EMB2 1281 aa19.2■□□□□ 0.66
CPSF1-210ENST00000532935 MXD3Q9BW11 206 aa19.2■□□□□ 0.66
CPSF1-210ENST00000532935 CREBZFQ9NS37 354 aa19.2■□□□□ 0.66
CPSF1-210ENST00000532935 PCNTO95613 3336 aa19.2■□□□□ 0.66
CPSF1-210ENST00000532935 EYA2O00167 538 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 USP17L8P0C7I0 530 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 IL1R1P14778 569 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 GTF2IP78347 998 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 KIF4BQ2VIQ3 1234 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 RBM26Q5T8P6 1007 aaKnown RBP19.19■□□□□ 0.66
CPSF1-210ENST00000532935 FTSJ3Q8IY81 847 aaKnown RBP19.19■□□□□ 0.66
CPSF1-210ENST00000532935 VGLL2Q8N8G2 317 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 MYH13Q9UKX3 1938 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 MYO3BQ8WXR4 1341 aa19.19■□□□□ 0.66
CPSF1-210ENST00000532935 PDE8BO95263 885 aa19.18■□□□□ 0.66
CPSF1-210ENST00000532935 DZIP1LQ8IYY4 767 aaKnown RBP19.18■□□□□ 0.66
CPSF1-210ENST00000532935 ARAP2Q8WZ64 1704 aa19.17■□□□□ 0.66
CPSF1-210ENST00000532935 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
CPSF1-210ENST00000532935 GNAI2P04899 355 aa19.17■□□□□ 0.66
CPSF1-210ENST00000532935 GYG1P46976 350 aa19.17■□□□□ 0.66
CPSF1-210ENST00000532935 KLRG1Q96E93 195 aa19.17■□□□□ 0.66
CPSF1-210ENST00000532935 SIL1Q9H173 461 aa19.17■□□□□ 0.66
CPSF1-210ENST00000532935 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
CPSF1-210ENST00000532935 TRAF5O00463 557 aa19.16■□□□□ 0.66
CPSF1-210ENST00000532935 CIAO1O76071 339 aa19.16■□□□□ 0.66
CPSF1-210ENST00000532935 RLBP1P12271 317 aa19.16■□□□□ 0.66
CPSF1-210ENST00000532935 HIBADHP31937 336 aaKnown RBP19.16■□□□□ 0.66
CPSF1-210ENST00000532935 FMR1Q06787 632 aaKnown RBP eCLIP19.16■□□□□ 0.662e-6■■□□□ 14.3
CPSF1-210ENST00000532935 ATG9AQ7Z3C6 839 aa19.16■□□□□ 0.66
CPSF1-210ENST00000532935 FAM84BQ96KN1 310 aaPredicted RBP19.16■□□□□ 0.66
CPSF1-210ENST00000532935 GLIS2Q9BZE0 524 aaPredicted RBP19.16■□□□□ 0.66
CPSF1-210ENST00000532935 MYOZ2Q9NPC6 264 aa19.16■□□□□ 0.66
CPSF1-210ENST00000532935 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
CPSF1-210ENST00000532935 MTX1Q13505 466 aa19.15■□□□□ 0.66
CPSF1-210ENST00000532935 PUM3Q15397 648 aaKnown RBP19.15■□□□□ 0.66
CPSF1-210ENST00000532935 CDC37L1Q7L3B6 337 aa19.15■□□□□ 0.66
CPSF1-210ENST00000532935 COPRSQ9NQ92 184 aa19.15■□□□□ 0.66
CPSF1-210ENST00000532935 PA2G4Q9UQ80 394 aaKnown RBP19.15■□□□□ 0.66
CPSF1-210ENST00000532935 ECM29Q5VYK3 1845 aa19.14■□□□□ 0.65
CPSF1-210ENST00000532935 SASH1O94885 1247 aa19.14■□□□□ 0.65
CPSF1-210ENST00000532935 MMP14P50281 582 aa19.14■□□□□ 0.65
CPSF1-210ENST00000532935 ITPRIPQ8IWB1 547 aa19.14■□□□□ 0.65
CPSF1-210ENST00000532935 OGFOD1Q8N543 542 aa19.14■□□□□ 0.65
CPSF1-210ENST00000532935 TDRD7Q8NHU6 1098 aaKnown RBP19.14■□□□□ 0.65
CPSF1-210ENST00000532935 FGFR2P21802 821 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 IL15P40933 162 aaPredicted RBP19.13■□□□□ 0.65
CPSF1-210ENST00000532935 FBXO33Q7Z6M2 555 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 USP48Q86UV5 1035 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 VPS37DQ86XT2 251 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 KIAA0825Q8IV33 1275 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 CERS5Q8N5B7 392 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 DCPSQ96C86 337 aaKnown RBP19.13■□□□□ 0.65
CPSF1-210ENST00000532935 GGA3Q9NZ52 723 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 RCAN3Q9UKA8 241 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 JAG2Q9Y219 1238 aa19.13■□□□□ 0.65
CPSF1-210ENST00000532935 ASTN2O75129 1339 aaPredicted RBP19.13■□□□□ 0.65
CPSF1-210ENST00000532935 FAM205AQ6ZU69 1335 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 718.3 ms