RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 CCDC186Q7Z3E2 898 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
SSH3-210ENST00000532881 DRC7Q8IY82 874 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 PALLDQ8WX93 1383 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 PDIA3P30101 505 aaKnown RBP17.54■□□□□ 0.4
SSH3-210ENST00000532881 C11orf57Q6ZUT1 292 aaPredicted RBP17.54■□□□□ 0.4
SSH3-210ENST00000532881 BRINP3Q76B58 766 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 SMARCC2Q8TAQ2 1214 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
SSH3-210ENST00000532881 KIF1AQ12756 1690 aa17.54■□□□□ 0.4
SSH3-210ENST00000532881 RNF113AO15541 343 aaKnown RBP17.53■□□□□ 0.4
SSH3-210ENST00000532881 ZAP70P43403 619 aa17.53■□□□□ 0.4
SSH3-210ENST00000532881 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
SSH3-210ENST00000532881 TRIM5Q9C035 493 aa17.53■□□□□ 0.4
SSH3-210ENST00000532881 ZNF165P49910 485 aa17.53■□□□□ 0.4
SSH3-210ENST00000532881 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
SSH3-210ENST00000532881 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
SSH3-210ENST00000532881 POLR3DP05423 398 aaPredicted RBP17.52■□□□□ 0.4
SSH3-210ENST00000532881 FDPSP14324 419 aaKnown RBP17.52■□□□□ 0.4
SSH3-210ENST00000532881 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 KIAA1524Q8TCG1 905 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 HELLSQ9NRZ9 838 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 CEP126Q9P2H0 1117 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
SSH3-210ENST00000532881 ARID5BQ14865 1188 aa17.52■□□□□ 0.39
SSH3-210ENST00000532881 HLFQ16534 295 aa17.52■□□□□ 0.39
SSH3-210ENST00000532881 CCDC191Q8NCU4 936 aa17.52■□□□□ 0.39
SSH3-210ENST00000532881 PDCL3Q9H2J4 239 aa17.52■□□□□ 0.39
SSH3-210ENST00000532881 WDR17Q8IZU2 1322 aa17.51■□□□□ 0.39
SSH3-210ENST00000532881 TTC39AQ5SRH9 613 aa17.51■□□□□ 0.39
SSH3-210ENST00000532881 DSCC1Q9BVC3 393 aa17.51■□□□□ 0.39
SSH3-210ENST00000532881 FGAP02671 866 aa17.51■□□□□ 0.39
SSH3-210ENST00000532881 RXRAP19793 462 aa17.51■□□□□ 0.39
SSH3-210ENST00000532881 TERF1P54274 439 aa17.51■□□□□ 0.39
SSH3-210ENST00000532881 SNAP23O00161 211 aa17.5■□□□□ 0.39
SSH3-210ENST00000532881 INCENPQ9NQS7 918 aa17.5■□□□□ 0.39
SSH3-210ENST00000532881 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
SSH3-210ENST00000532881 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
SSH3-210ENST00000532881 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
SSH3-210ENST00000532881 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
SSH3-210ENST00000532881 IL2RBP14784 551 aa17.49■□□□□ 0.39
SSH3-210ENST00000532881 ME1P48163 572 aa17.49■□□□□ 0.39
SSH3-210ENST00000532881 LMTK3Q96Q04 1460 aa17.49■□□□□ 0.39
SSH3-210ENST00000532881 A0A1B0GVL5 298 aa17.49■□□□□ 0.39
SSH3-210ENST00000532881 EVA1CP58658 441 aa17.49■□□□□ 0.39
SSH3-210ENST00000532881 SNW1Q13573 536 aaKnown RBP17.49■□□□□ 0.39
SSH3-210ENST00000532881 TJP1Q07157 1748 aa17.49■□□□□ 0.39
SSH3-210ENST00000532881 TCIRG1Q13488 830 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
SSH3-210ENST00000532881 MYRIPQ8NFW9 859 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 AIFM3Q96NN9 605 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
SSH3-210ENST00000532881 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
SSH3-210ENST00000532881 GREM2Q9H772 168 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 SPTLC3Q9NUV7 552 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 CFAP45Q9UL16 551 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 CLIC4Q9Y696 253 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 KCPQ6ZWJ8 1503 aa17.48■□□□□ 0.39
SSH3-210ENST00000532881 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 ZNF75DP51815 510 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 CCDC158Q5M9N0 1113 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 ZNF710Q8N1W2 664 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 DYNC1I1O14576 645 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 PIGBQ92521 554 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 SALL1Q9NSC2 1324 aa17.47■□□□□ 0.39
SSH3-210ENST00000532881 KLF18A0A0U1RQI7 1052 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 UBE2Q2LH0YL09 131 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 HMGB1P09429 215 aaKnown RBP17.46■□□□□ 0.39
SSH3-210ENST00000532881 MCAMP43121 646 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 ANTXR2P58335 489 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 STK11IPQ8N1F8 1099 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 AGXT2Q9BYV1 514 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 TMOD3Q9NYL9 352 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 RCOR1Q9UKL0 485 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 PRC1O43663 620 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 ISM2Q6H9L7 571 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 C16orf45Q96MC5 204 aaPredicted RBP17.46■□□□□ 0.39
SSH3-210ENST00000532881 GPR108Q9NPR9 543 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 PCDHA7Q9UN72 937 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 RFX7Q2KHR2 1363 aa17.46■□□□□ 0.39
SSH3-210ENST00000532881 PLA2G4DQ86XP0 818 aa17.45■□□□□ 0.38
SSH3-210ENST00000532881 CACTINQ8WUQ7 758 aaKnown RBP17.45■□□□□ 0.38
SSH3-210ENST00000532881 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
SSH3-210ENST00000532881 CPDO75976 1380 aa17.45■□□□□ 0.38
SSH3-210ENST00000532881 IFIT5Q13325 482 aaKnown RBP17.45■□□□□ 0.38
SSH3-210ENST00000532881 IQCB1Q15051 598 aa17.45■□□□□ 0.38
SSH3-210ENST00000532881 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
SSH3-210ENST00000532881 LLPHQ9BRT6 129 aaKnown RBP17.45■□□□□ 0.38
SSH3-210ENST00000532881 CLIP2Q9UDT6 1046 aa17.45■□□□□ 0.38
SSH3-210ENST00000532881 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms