RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 KRT26Q7Z3Y9 468 aa29.19■■■□□ 2.26
LTBP3-220ENST00000532661 SAPCD2Q86UD0 394 aa29.19■■■□□ 2.26
LTBP3-220ENST00000532661 MXD3Q9BW11 206 aa29.19■■■□□ 2.26
LTBP3-220ENST00000532661 SRCIN1Q9C0H9 1055 aa29.19■■■□□ 2.26
LTBP3-220ENST00000532661 WBP1LQ9NX94 342 aa29.19■■■□□ 2.26
LTBP3-220ENST00000532661 C9orf78Q9NZ63 289 aaPredicted RBP29.19■■■□□ 2.26
LTBP3-220ENST00000532661 SNAP23O00161 211 aa29.18■■■□□ 2.26
LTBP3-220ENST00000532661 ALDH1L1O75891 902 aa29.18■■■□□ 2.26
LTBP3-220ENST00000532661 IFIT5Q13325 482 aaKnown RBP29.18■■■□□ 2.26
LTBP3-220ENST00000532661 CDCA7LQ96GN5 454 aa29.18■■■□□ 2.26
LTBP3-220ENST00000532661 ADM5C9JUS6 153 aa29.17■■■□□ 2.26
LTBP3-220ENST00000532661 HELBQ8NG08 1087 aaPredicted RBP29.17■■■□□ 2.26
LTBP3-220ENST00000532661 DCPSQ96C86 337 aaKnown RBP29.17■■■□□ 2.26
LTBP3-220ENST00000532661 COA1Q9GZY4 146 aa29.17■■■□□ 2.26
LTBP3-220ENST00000532661 ZNF609O15014 1411 aa29.17■■■□□ 2.26
LTBP3-220ENST00000532661 TAF5LO75529 589 aa29.16■■■□□ 2.26
LTBP3-220ENST00000532661 USP17L8P0C7I0 530 aa29.16■■■□□ 2.26
LTBP3-220ENST00000532661 DACT2Q5SW24 774 aa29.16■■■□□ 2.26
LTBP3-220ENST00000532661 FBXW7Q969H0 707 aa29.16■■■□□ 2.26
LTBP3-220ENST00000532661 ZNF594Q96JF6 807 aaPredicted RBP29.16■■■□□ 2.26
LTBP3-220ENST00000532661 GGA3Q9NZ52 723 aa29.16■■■□□ 2.26
LTBP3-220ENST00000532661 ECE1P42892 770 aa29.15■■■□□ 2.26
LTBP3-220ENST00000532661 SSH1Q8WYL5 1049 aa29.15■■■□□ 2.26
LTBP3-220ENST00000532661 AIDAQ96BJ3 306 aa29.15■■■□□ 2.26
LTBP3-220ENST00000532661 AOC2O75106 756 aa29.14■■■□□ 2.26
LTBP3-220ENST00000532661 KCNJ4P48050 445 aa29.14■■■□□ 2.26
LTBP3-220ENST00000532661 SCARF1Q14162 830 aa29.14■■■□□ 2.26
LTBP3-220ENST00000532661 TNS4Q8IZW8 715 aa29.14■■■□□ 2.26
LTBP3-220ENST00000532661 SUCLG2Q96I99 432 aa29.14■■■□□ 2.26
LTBP3-220ENST00000532661 KAZALD1Q96I82 304 aa29.13■■■□□ 2.25
LTBP3-220ENST00000532661 MYOZ2Q9NPC6 264 aa29.13■■■□□ 2.25
LTBP3-220ENST00000532661 NBPF7P0C2Y1 421 aaPredicted RBP29.12■■■□□ 2.25
LTBP3-220ENST00000532661 CCDC57Q2TAC2 916 aa29.12■■■□□ 2.25
LTBP3-220ENST00000532661 PSME4Q14997 1843 aa29.12■■■□□ 2.25
LTBP3-220ENST00000532661 CTCFP49711 727 aaPredicted RBP29.11■■■□□ 2.25
LTBP3-220ENST00000532661 STRIP1Q5VSL9 837 aa29.11■■■□□ 2.25
LTBP3-220ENST00000532661 ANGEL2Q5VTE6 544 aaKnown RBP29.11■■■□□ 2.25
LTBP3-220ENST00000532661 IRS2Q9Y4H2 1338 aa29.11■■■□□ 2.25
LTBP3-220ENST00000532661 CCER2I3L3R5 266 aa29.1■■■□□ 2.25
LTBP3-220ENST00000532661 MAP2K1Q02750 393 aaPredicted RBP29.1■■■□□ 2.25
LTBP3-220ENST00000532661 TAF7LQ5H9L4 462 aa29.1■■■□□ 2.25
LTBP3-220ENST00000532661 TTLL5Q6EMB2 1281 aa29.1■■■□□ 2.25
LTBP3-220ENST00000532661 SULF1Q8IWU6 871 aa29.1■■■□□ 2.25
LTBP3-220ENST00000532661 LDHAL6AQ6ZMR3 332 aa29.09■■■□□ 2.25
LTBP3-220ENST00000532661 HHIPL1Q96JK4 782 aa29.09■■■□□ 2.25
LTBP3-220ENST00000532661 POLR2AP24928 1970 aaKnown RBP29.08■■■□□ 2.25
LTBP3-220ENST00000532661 PLIN1O60240 522 aa29.08■■■□□ 2.25
LTBP3-220ENST00000532661 LBX1P52954 281 aa29.08■■■□□ 2.25
LTBP3-220ENST00000532661 HUNKP57058 714 aa29.08■■■□□ 2.25
LTBP3-220ENST00000532661 GTF2IP78347 998 aa29.08■■■□□ 2.25
LTBP3-220ENST00000532661 TRMT2AQ8IZ69 625 aaKnown RBP29.08■■■□□ 2.25
LTBP3-220ENST00000532661 CD209Q9NNX6 404 aa29.08■■■□□ 2.25
LTBP3-220ENST00000532661 SCAF8Q9UPN6 1271 aaKnown RBP29.08■■■□□ 2.25
LTBP3-220ENST00000532661 UTYO14607 1347 aa29.08■■■□□ 2.25
LTBP3-220ENST00000532661 PTPRCP08575 1304 aa29.08■■■□□ 2.25
LTBP3-220ENST00000532661 GBA2Q9HCG7 927 aaPredicted RBP29.07■■■□□ 2.24
LTBP3-220ENST00000532661 CNNM1Q9NRU3 951 aa29.07■■■□□ 2.24
LTBP3-220ENST00000532661 HSPA8P11142 646 aaKnown RBP29.06■■■□□ 2.24
LTBP3-220ENST00000532661 NBPF9Q3BBW0 867 aa29.06■■■□□ 2.24
LTBP3-220ENST00000532661 C15orf52Q6ZUT6 534 aaKnown RBP29.06■■■□□ 2.24
LTBP3-220ENST00000532661 CDCA5Q96FF9 252 aa29.06■■■□□ 2.24
LTBP3-220ENST00000532661 PRDM10Q9NQV6 1147 aa29.06■■■□□ 2.24
LTBP3-220ENST00000532661 THSD7BQ9C0I4 1608 aa29.05■■■□□ 2.24
LTBP3-220ENST00000532661 MYO3BQ8WXR4 1341 aa29.05■■■□□ 2.24
LTBP3-220ENST00000532661 MAP2K2P36507 400 aa29.05■■■□□ 2.24
LTBP3-220ENST00000532661 C2orf69Q8N8R5 385 aa29.05■■■□□ 2.24
LTBP3-220ENST00000532661 PUS3Q9BZE2 481 aaKnown RBP29.05■■■□□ 2.24
LTBP3-220ENST00000532661 BICC1Q9H694 974 aaKnown RBP29.05■■■□□ 2.24
LTBP3-220ENST00000532661 ZNF646O15015 1829 aaPredicted RBP29.05■■■□□ 2.24
LTBP3-220ENST00000532661 OGFOD1Q8N543 542 aa29.04■■■□□ 2.24
LTBP3-220ENST00000532661 ALDH1L2Q3SY69 923 aa29.03■■■□□ 2.24
LTBP3-220ENST00000532661 KIAA0825Q8IV33 1275 aa29.03■■■□□ 2.24
LTBP3-220ENST00000532661 ZIC5Q96T25 663 aa29.03■■■□□ 2.24
LTBP3-220ENST00000532661 CAPN15O75808 1086 aa29.02■■■□□ 2.24
LTBP3-220ENST00000532661 ANKRD44Q8N8A2 993 aa29.02■■■□□ 2.24
LTBP3-220ENST00000532661 SMC4Q9NTJ3 1288 aa29.02■■■□□ 2.24
LTBP3-220ENST00000532661 PITPNM2Q9BZ72 1349 aa29.01■■■□□ 2.23
LTBP3-220ENST00000532661 WNT10BO00744 389 aa29.01■■■□□ 2.23
LTBP3-220ENST00000532661 SASH1O94885 1247 aa29.01■■■□□ 2.23
LTBP3-220ENST00000532661 RABL6Q3YEC7 729 aaPredicted RBP29.01■■■□□ 2.23
LTBP3-220ENST00000532661 CERS5Q8N5B7 392 aa29.01■■■□□ 2.23
LTBP3-220ENST00000532661 USP44Q9H0E7 712 aa29.01■■■□□ 2.23
LTBP3-220ENST00000532661 PRAMEF18Q5VWM3 479 aa29■■■□□ 2.23
LTBP3-220ENST00000532661 RGMBQ6NW40 437 aa29■■■□□ 2.23
LTBP3-220ENST00000532661 ZNF804AQ7Z570 1209 aa29■■■□□ 2.23
LTBP3-220ENST00000532661 BEGAINQ9BUH8 593 aa29■■■□□ 2.23
LTBP3-220ENST00000532661 A0A1B0GUL6 1792 aa29■■■□□ 2.23
LTBP3-220ENST00000532661 IL1R1P14778 569 aa28.99■■■□□ 2.23
LTBP3-220ENST00000532661 TSKSQ9UJT2 592 aa28.99■■■□□ 2.23
LTBP3-220ENST00000532661 JAG2Q9Y219 1238 aa28.99■■■□□ 2.23
LTBP3-220ENST00000532661 HDAC9Q9UKV0 1011 aa28.98■■■□□ 2.23
LTBP3-220ENST00000532661 RIPOR2Q9Y4F9 1068 aa28.98■■■□□ 2.23
LTBP3-220ENST00000532661 FAM155AB1AL88 458 aaPredicted RBP28.97■■■□□ 2.23
LTBP3-220ENST00000532661 NOGQ13253 232 aa28.96■■■□□ 2.23
LTBP3-220ENST00000532661 UBE4AQ14139 1066 aa28.96■■■□□ 2.23
LTBP3-220ENST00000532661 LRRC24Q50LG9 513 aa28.96■■■□□ 2.23
LTBP3-220ENST00000532661 GYG1P46976 350 aa28.95■■■□□ 2.22
LTBP3-220ENST00000532661 MMP14P50281 582 aa28.95■■■□□ 2.22
LTBP3-220ENST00000532661 ZNF157P51786 506 aaPredicted RBP28.95■■■□□ 2.22
LTBP3-220ENST00000532661 BRPF1P55201 1214 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms