RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 GORABQ5T7V8 394 aa26.72■■□□□ 1.87
PACSIN3-209ENST00000532457 PRPF40BQ6NWY9 871 aaKnown RBP26.72■■□□□ 1.87
PACSIN3-209ENST00000532457 TMC4Q7Z404 712 aa26.72■■□□□ 1.87
PACSIN3-209ENST00000532457 EVI5LQ96CN4 794 aa26.71■■□□□ 1.87
PACSIN3-209ENST00000532457 TMX4Q9H1E5 349 aaPredicted RBP26.71■■□□□ 1.87
PACSIN3-209ENST00000532457 PHKA1P46020 1223 aa26.7■■□□□ 1.87
PACSIN3-209ENST00000532457 CCDC158Q5M9N0 1113 aa26.7■■□□□ 1.87
PACSIN3-209ENST00000532457 BRCA1P38398 1863 aaKnown RBP26.7■■□□□ 1.86
PACSIN3-209ENST00000532457 A0A1B0GUL6 1792 aa26.7■■□□□ 1.86
PACSIN3-209ENST00000532457 DNAJC2Q99543 621 aaKnown RBP26.69■■□□□ 1.86
PACSIN3-209ENST00000532457 BCS1LQ9Y276 419 aa26.69■■□□□ 1.86
PACSIN3-209ENST00000532457 IFIT1P09914 478 aaKnown RBP26.69■■□□□ 1.86
PACSIN3-209ENST00000532457 SLC5A1P13866 664 aa26.69■■□□□ 1.86
PACSIN3-209ENST00000532457 TTC39AQ5SRH9 613 aa26.69■■□□□ 1.86
PACSIN3-209ENST00000532457 CCDC102BQ68D86 513 aa26.69■■□□□ 1.86
PACSIN3-209ENST00000532457 IL25Q9H293 177 aa26.69■■□□□ 1.86
PACSIN3-209ENST00000532457 PPEF1O14829 653 aaPredicted RBP26.68■■□□□ 1.86
PACSIN3-209ENST00000532457 SNRKQ9NRH2 765 aa26.68■■□□□ 1.86
PACSIN3-209ENST00000532457 UTRNP46939 3433 aa26.68■■□□□ 1.86
PACSIN3-209ENST00000532457 BCAMP50895 628 aa26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 PI16Q6UXB8 463 aa26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 WWC3Q9ULE0 1092 aa26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 AK9Q5TCS8 1911 aa26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 UBE4AQ14139 1066 aa26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 SOGA3Q5TF21 947 aa26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 ANTXR1Q9H6X2 564 aa26.67■■□□□ 1.86
PACSIN3-209ENST00000532457 MCAMP43121 646 aa26.66■■□□□ 1.86
PACSIN3-209ENST00000532457 ESYT1Q9BSJ8 1104 aa26.66■■□□□ 1.86
PACSIN3-209ENST00000532457 CACNA1SQ13698 1873 aa26.66■■□□□ 1.86
PACSIN3-209ENST00000532457 KLRK1P26718 216 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 ZNF512BQ96KM6 892 aaPredicted RBP26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 ANKRD2Q9GZV1 360 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 GOLIM4O00461 696 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 CHGBP05060 677 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 CC2D2BQ6DHV5 1058 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 SP8Q8IXZ3 490 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 ATP6V0A2Q9Y487 856 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 ARAP2Q8WZ64 1704 aa26.65■■□□□ 1.86
PACSIN3-209ENST00000532457 SLX4Q8IY92 1834 aa26.64■■□□□ 1.86
PACSIN3-209ENST00000532457 ZAP70P43403 619 aa26.64■■□□□ 1.85
PACSIN3-209ENST00000532457 PAG1Q9NWQ8 432 aa26.64■■□□□ 1.85
PACSIN3-209ENST00000532457 C21orf2O43822 256 aa26.63■■□□□ 1.85
PACSIN3-209ENST00000532457 ARID4AP29374 1257 aaPredicted RBP26.63■■□□□ 1.85
PACSIN3-209ENST00000532457 GPSM2P81274 684 aa26.63■■□□□ 1.85
PACSIN3-209ENST00000532457 FKBP4Q02790 459 aaKnown RBP eCLIP26.63■■□□□ 1.855e-7■■□□□ 12.9
PACSIN3-209ENST00000532457 GRIPAP1Q4V328 841 aa26.63■■□□□ 1.85
PACSIN3-209ENST00000532457 CASC1Q6TDU7 716 aa26.63■■□□□ 1.85
PACSIN3-209ENST00000532457 AKAP11Q9UKA4 1901 aa26.63■■□□□ 1.85
PACSIN3-209ENST00000532457 GYG1P46976 350 aa26.62■■□□□ 1.85
PACSIN3-209ENST00000532457 FSD1Q9BTV5 496 aa26.62■■□□□ 1.85
PACSIN3-209ENST00000532457 GPR162Q16538 588 aa26.62■■□□□ 1.85
PACSIN3-209ENST00000532457 C7orf43Q8WVR3 580 aa26.62■■□□□ 1.85
PACSIN3-209ENST00000532457 FAM84BQ96KN1 310 aaPredicted RBP26.62■■□□□ 1.85
PACSIN3-209ENST00000532457 TBC1D32Q96NH3 1257 aa26.62■■□□□ 1.85
PACSIN3-209ENST00000532457 IRS2Q9Y4H2 1338 aa26.62■■□□□ 1.85
PACSIN3-209ENST00000532457 DCAF8L1A6NGE4 600 aa26.61■■□□□ 1.85
PACSIN3-209ENST00000532457 CWC27Q6UX04 472 aaKnown RBP26.61■■□□□ 1.85
PACSIN3-209ENST00000532457 TXNRD3Q86VQ6 643 aa26.61■■□□□ 1.85
PACSIN3-209ENST00000532457 ZNF219Q9P2Y4 722 aaPredicted RBP26.61■■□□□ 1.85
PACSIN3-209ENST00000532457 ZNF804BA4D1E1 1349 aa26.61■■□□□ 1.85
PACSIN3-209ENST00000532457 OLFM4Q6UX06 510 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 KBTBD3Q8NAB2 608 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 FAM227BQ96M60 508 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 HMG20BQ9P0W2 317 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 ANKIB1Q9P2G1 1089 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 ARFGEF1Q9Y6D6 1849 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 SLFNL1Q499Z3 407 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 CCDC93Q567U6 631 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 RTKN2Q8IZC4 609 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 USP26Q9BXU7 913 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 C22orf23Q9BZE7 217 aa26.6■■□□□ 1.85
PACSIN3-209ENST00000532457 CYP2E1P05181 493 aaPredicted RBP26.59■■□□□ 1.85
PACSIN3-209ENST00000532457 UQCRFS1P1P0C7P4 283 aa26.59■■□□□ 1.85
PACSIN3-209ENST00000532457 RASGRF1Q13972 1273 aa26.59■■□□□ 1.85
PACSIN3-209ENST00000532457 FBXO33Q7Z6M2 555 aa26.59■■□□□ 1.85
PACSIN3-209ENST00000532457 KCNJ4P48050 445 aa26.58■■□□□ 1.85
PACSIN3-209ENST00000532457 NMIQ13287 307 aaPredicted RBP26.58■■□□□ 1.85
PACSIN3-209ENST00000532457 GPR101Q96P66 508 aaPredicted RBP26.58■■□□□ 1.85
PACSIN3-209ENST00000532457 SGSM2O43147 1006 aa26.58■■□□□ 1.84
PACSIN3-209ENST00000532457 GRIN3BO60391 1043 aa26.58■■□□□ 1.84
PACSIN3-209ENST00000532457 UPF2Q9HAU5 1272 aaKnown RBP26.58■■□□□ 1.84
PACSIN3-209ENST00000532457 DIAPH3Q9NSV4 1193 aa26.58■■□□□ 1.84
PACSIN3-209ENST00000532457 NSFL1CQ9UNZ2 370 aaKnown RBP26.58■■□□□ 1.84
PACSIN3-209ENST00000532457 IQSEC3Q9UPP2 1182 aaPredicted RBP26.58■■□□□ 1.84
PACSIN3-209ENST00000532457 XDHP47989 1333 aa26.57■■□□□ 1.84
PACSIN3-209ENST00000532457 LEMD3Q9Y2U8 911 aa26.57■■□□□ 1.84
PACSIN3-209ENST00000532457 A0A0D9SFI3 127 aa26.56■■□□□ 1.84
PACSIN3-209ENST00000532457 YBX3P16989 372 aaKnown RBP eCLIP26.56■■□□□ 1.84
PACSIN3-209ENST00000532457 SPATA5Q8NB90 893 aa26.56■■□□□ 1.84
PACSIN3-209ENST00000532457 PIH1D3Q9NQM4 214 aaKnown RBP26.56■■□□□ 1.84
PACSIN3-209ENST00000532457 MPNDQ8N594 471 aa26.55■■□□□ 1.84
PACSIN3-209ENST00000532457 POLLQ9UGP5 575 aa26.55■■□□□ 1.84
PACSIN3-209ENST00000532457 DPP8Q6V1X1 898 aaPredicted RBP26.55■■□□□ 1.84
PACSIN3-209ENST00000532457 PODXL2Q9NZ53 605 aa26.55■■□□□ 1.84
PACSIN3-209ENST00000532457 LRRC37AA6NMS7 1700 aa26.55■■□□□ 1.84
PACSIN3-209ENST00000532457 RBM25P49756 843 aaKnown RBP26.53■■□□□ 1.84
PACSIN3-209ENST00000532457 CAVIN4Q5BKX8 364 aa26.53■■□□□ 1.84
PACSIN3-209ENST00000532457 HIP1O00291 1037 aa26.53■■□□□ 1.84
PACSIN3-209ENST00000532457 REC8O95072 547 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms