RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 BEND3Q5T5X7 828 aa16.98■□□□□ 0.31
AMBRA1-210ENST00000531542 C2orf69Q8N8R5 385 aa16.98■□□□□ 0.31
AMBRA1-210ENST00000531542 GBA2Q9HCG7 927 aaPredicted RBP16.98■□□□□ 0.31
AMBRA1-210ENST00000531542 MYOZ2Q9NPC6 264 aa16.98■□□□□ 0.31
AMBRA1-210ENST00000531542 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
AMBRA1-210ENST00000531542 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 GRM1Q13255 1194 aa16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 SCARF1Q14162 830 aa16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 DACT2Q5SW24 774 aa16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 CCDC102AQ96A19 550 aa16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 MPHOSPH8Q99549 860 aa16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
AMBRA1-210ENST00000531542 ZNF804BA4D1E1 1349 aa16.96■□□□□ 0.31
AMBRA1-210ENST00000531542 ADM5C9JUS6 153 aa16.96■□□□□ 0.31
AMBRA1-210ENST00000531542 CAPN15O75808 1086 aa16.96■□□□□ 0.31
AMBRA1-210ENST00000531542 FKBP1BP68106 108 aa16.96■□□□□ 0.31
AMBRA1-210ENST00000531542 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
AMBRA1-210ENST00000531542 RGMBQ6NW40 437 aa16.96■□□□□ 0.31
AMBRA1-210ENST00000531542 C15orf52Q6ZUT6 534 aaKnown RBP16.96■□□□□ 0.31
AMBRA1-210ENST00000531542 ANKRD18BA2A2Z9 1011 aa16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 FAM155AB1AL88 458 aaPredicted RBP16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 FOXO4P98177 505 aa16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 DLK2Q6UY11 383 aa16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 OGFOD1Q8N543 542 aa16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 MYH3P11055 1940 aa16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 PSME4Q14997 1843 aa16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
AMBRA1-210ENST00000531542 TXNRD3Q86VQ6 643 aa16.94■□□□□ 0.3
AMBRA1-210ENST00000531542 CDCA5Q96FF9 252 aa16.94■□□□□ 0.3
AMBRA1-210ENST00000531542 ASTN2O75129 1339 aaPredicted RBP16.94■□□□□ 0.3
AMBRA1-210ENST00000531542 ALDH1L1O75891 902 aa16.93■□□□□ 0.3
AMBRA1-210ENST00000531542 CHRNDQ07001 517 aa16.93■□□□□ 0.3
AMBRA1-210ENST00000531542 IFIT5Q13325 482 aaKnown RBP16.93■□□□□ 0.3
AMBRA1-210ENST00000531542 IRS2Q9Y4H2 1338 aa16.93■□□□□ 0.3
AMBRA1-210ENST00000531542 F6X3S4 739 aa16.92■□□□□ 0.3
AMBRA1-210ENST00000531542 GRM8O00222 908 aa16.92■□□□□ 0.3
AMBRA1-210ENST00000531542 TTLL5Q6EMB2 1281 aa16.92■□□□□ 0.3
AMBRA1-210ENST00000531542 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
AMBRA1-210ENST00000531542 FAM9BQ8IZU0 186 aa16.92■□□□□ 0.3
AMBRA1-210ENST00000531542 SAGE1Q9NXZ1 904 aa16.92■□□□□ 0.3
AMBRA1-210ENST00000531542 SLC10A3P09131 477 aa16.91■□□□□ 0.3
AMBRA1-210ENST00000531542 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
AMBRA1-210ENST00000531542 ABHD8Q96I13 439 aa16.91■□□□□ 0.3
AMBRA1-210ENST00000531542 WNT10BO00744 389 aa16.9■□□□□ 0.3
AMBRA1-210ENST00000531542 ZIC5Q96T25 663 aa16.9■□□□□ 0.3
AMBRA1-210ENST00000531542 CD209Q9NNX6 404 aa16.9■□□□□ 0.3
AMBRA1-210ENST00000531542 KLRK1P26718 216 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 KCNJ4P48050 445 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 CCDC57Q2TAC2 916 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 NBPF9Q3BBW0 867 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 LMBR1LQ6UX01 489 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 ZBED3Q96IU2 234 aaPredicted RBP16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 SRCIN1Q9C0H9 1055 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 UTYO14607 1347 aa16.89■□□□□ 0.29
AMBRA1-210ENST00000531542 POLR2AP24928 1970 aaKnown RBP16.88■□□□□ 0.29
AMBRA1-210ENST00000531542 IL1R1P14778 569 aa16.88■□□□□ 0.29
AMBRA1-210ENST00000531542 KIF23Q02241 960 aaPredicted RBP16.88■□□□□ 0.29
AMBRA1-210ENST00000531542 EPHA10Q5JZY3 1008 aa16.88■□□□□ 0.29
AMBRA1-210ENST00000531542 MTMR14Q8NCE2 650 aa16.88■□□□□ 0.29
AMBRA1-210ENST00000531542 MXD3Q9BW11 206 aa16.88■□□□□ 0.29
AMBRA1-210ENST00000531542 C9orf78Q9NZ63 289 aaPredicted RBP16.88■□□□□ 0.29
AMBRA1-210ENST00000531542 GTF2IP78347 998 aa16.87■□□□□ 0.29
AMBRA1-210ENST00000531542 LDHAL6AQ6ZMR3 332 aa16.87■□□□□ 0.29
AMBRA1-210ENST00000531542 TSKSQ9UJT2 592 aa16.87■□□□□ 0.29
AMBRA1-210ENST00000531542 TAF5LO75529 589 aa16.86■□□□□ 0.29
AMBRA1-210ENST00000531542 ZNF804AQ7Z570 1209 aa16.86■□□□□ 0.29
AMBRA1-210ENST00000531542 RASAL3Q86YV0 1011 aa16.86■□□□□ 0.29
AMBRA1-210ENST00000531542 APOBEC3FQ8IUX4 373 aaKnown RBP16.86■□□□□ 0.29
AMBRA1-210ENST00000531542 CSRNP1Q96S65 589 aa16.86■□□□□ 0.29
AMBRA1-210ENST00000531542 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
AMBRA1-210ENST00000531542 ZNF646O15015 1829 aaPredicted RBP16.86■□□□□ 0.29
AMBRA1-210ENST00000531542 E9PSI1 815 aa16.85■□□□□ 0.29
AMBRA1-210ENST00000531542 KIAA0825Q8IV33 1275 aa16.85■□□□□ 0.29
AMBRA1-210ENST00000531542 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
AMBRA1-210ENST00000531542 KAZALD1Q96I82 304 aa16.85■□□□□ 0.29
AMBRA1-210ENST00000531542 RNF186Q9NXI6 227 aa16.85■□□□□ 0.29
AMBRA1-210ENST00000531542 PTPRCP08575 1304 aa16.85■□□□□ 0.29
AMBRA1-210ENST00000531542 SNAP23O00161 211 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 SASH1O94885 1247 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 NF2P35240 595 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 CERS5Q8N5B7 392 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 MRPL50Q8N5N7 158 aaKnown RBP16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 HELBQ8NG08 1087 aaPredicted RBP16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 CNNM1Q9NRU3 951 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 COL1A1P02452 1464 aaPredicted RBP16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
AMBRA1-210ENST00000531542 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
AMBRA1-210ENST00000531542 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
AMBRA1-210ENST00000531542 NBPF7P0C2Y1 421 aaPredicted RBP16.82■□□□□ 0.28
AMBRA1-210ENST00000531542 RGS19P49795 217 aa16.82■□□□□ 0.28
AMBRA1-210ENST00000531542 DLGAP5Q15398 846 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms