RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 FTSJ3Q8IY81 847 aaKnown RBP18.09■□□□□ 0.49
FOXR1-202ENST00000531539 DPF2Q92785 391 aa18.09■□□□□ 0.49
FOXR1-202ENST00000531539 YTHDC1Q96MU7 727 aaKnown RBP18.09■□□□□ 0.49
FOXR1-202ENST00000531539 ADARB2Q9NS39 739 aaKnown RBP18.09■□□□□ 0.49
FOXR1-202ENST00000531539 MROH5Q6ZUA9 1318 aa18.08■□□□□ 0.49
FOXR1-202ENST00000531539 RFX5P48382 616 aaPredicted RBP18.08■□□□□ 0.48
FOXR1-202ENST00000531539 METTL24Q5JXM2 366 aa18.08■□□□□ 0.48
FOXR1-202ENST00000531539 RBM26Q5T8P6 1007 aaKnown RBP18.08■□□□□ 0.48
FOXR1-202ENST00000531539 MAP1SQ66K74 1059 aaPredicted RBP18.08■□□□□ 0.48
FOXR1-202ENST00000531539 MICALL2Q8IY33 904 aa18.08■□□□□ 0.48
FOXR1-202ENST00000531539 LTBP1Q14766 1721 aa18.08■□□□□ 0.48
FOXR1-202ENST00000531539 SCN4AP35499 1836 aa18.07■□□□□ 0.48
FOXR1-202ENST00000531539 RPS12P25398 132 aaKnown RBP18.07■□□□□ 0.48
FOXR1-202ENST00000531539 APLP1P51693 650 aa18.07■□□□□ 0.48
FOXR1-202ENST00000531539 PTPN12Q05209 780 aaKnown RBP18.07■□□□□ 0.48
FOXR1-202ENST00000531539 CD209Q9NNX6 404 aa18.07■□□□□ 0.48
FOXR1-202ENST00000531539 RCAN3Q9UKA8 241 aa18.07■□□□□ 0.48
FOXR1-202ENST00000531539 EYA2O00167 538 aa18.06■□□□□ 0.48
FOXR1-202ENST00000531539 GNAI2P04899 355 aa18.06■□□□□ 0.48
FOXR1-202ENST00000531539 UBE4AQ14139 1066 aa18.06■□□□□ 0.48
FOXR1-202ENST00000531539 TTLL5Q6EMB2 1281 aa18.06■□□□□ 0.48
FOXR1-202ENST00000531539 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
FOXR1-202ENST00000531539 C15orf52Q6ZUT6 534 aaKnown RBP18.06■□□□□ 0.48
FOXR1-202ENST00000531539 SAMD7Q7Z3H4 446 aa18.06■□□□□ 0.48
FOXR1-202ENST00000531539 CNTROBQ8N137 903 aa18.06■□□□□ 0.48
FOXR1-202ENST00000531539 SIL1Q9H173 461 aa18.06■□□□□ 0.48
FOXR1-202ENST00000531539 RLBP1P12271 317 aa18.05■□□□□ 0.48
FOXR1-202ENST00000531539 HIRAP54198 1017 aaPredicted RBP18.05■□□□□ 0.48
FOXR1-202ENST00000531539 GTF2IP78347 998 aa18.05■□□□□ 0.48
FOXR1-202ENST00000531539 HTRA3P83110 453 aa18.05■□□□□ 0.48
FOXR1-202ENST00000531539 TBC1D10BQ4KMP7 808 aaPredicted RBP18.05■□□□□ 0.48
FOXR1-202ENST00000531539 ZNF804AQ7Z570 1209 aa18.05■□□□□ 0.48
FOXR1-202ENST00000531539 ITPRIPQ8IWB1 547 aa18.05■□□□□ 0.48
FOXR1-202ENST00000531539 AGBL3Q8NEM8 1001 aa18.05■□□□□ 0.48
FOXR1-202ENST00000531539 MXD3Q9BW11 206 aa18.05■□□□□ 0.48
FOXR1-202ENST00000531539 PDE8BO95263 885 aa18.04■□□□□ 0.48
FOXR1-202ENST00000531539 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
FOXR1-202ENST00000531539 STRIP1Q5VSL9 837 aa18.04■□□□□ 0.48
FOXR1-202ENST00000531539 PANK1Q8TE04 598 aa18.04■□□□□ 0.48
FOXR1-202ENST00000531539 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
FOXR1-202ENST00000531539 IRS2Q9Y4H2 1338 aa18.03■□□□□ 0.48
FOXR1-202ENST00000531539 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
FOXR1-202ENST00000531539 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
FOXR1-202ENST00000531539 GYG1P46976 350 aa18.03■□□□□ 0.48
FOXR1-202ENST00000531539 DACT2Q5SW24 774 aa18.03■□□□□ 0.48
FOXR1-202ENST00000531539 ATG9AQ7Z3C6 839 aa18.03■□□□□ 0.48
FOXR1-202ENST00000531539 TRPM4Q8TD43 1214 aa18.03■□□□□ 0.48
FOXR1-202ENST00000531539 ZBTB7BO15156 539 aaPredicted RBP18.02■□□□□ 0.48
FOXR1-202ENST00000531539 USP17L8P0C7I0 530 aa18.02■□□□□ 0.48
FOXR1-202ENST00000531539 MS4A1P11836 297 aa18.02■□□□□ 0.48
FOXR1-202ENST00000531539 FAM84BQ96KN1 310 aaPredicted RBP18.02■□□□□ 0.48
FOXR1-202ENST00000531539 GMLQ99445 158 aa18.02■□□□□ 0.48
FOXR1-202ENST00000531539 CEP126Q9P2H0 1117 aa18.02■□□□□ 0.48
FOXR1-202ENST00000531539 EGFRP00533 1210 aa18.01■□□□□ 0.47
FOXR1-202ENST00000531539 IL1R1P14778 569 aa18.01■□□□□ 0.47
FOXR1-202ENST00000531539 VPS37DQ86XT2 251 aa18.01■□□□□ 0.47
FOXR1-202ENST00000531539 SCN9AQ15858 1988 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 CIAO1O76071 339 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 VGLL2Q8N8G2 317 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 ZC3H15Q8WU90 426 aaKnown RBP18■□□□□ 0.47
FOXR1-202ENST00000531539 C1orf115Q9H7X2 142 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 COPRSQ9NQ92 184 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 PGAP2Q9UHJ9 254 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 FBXO3Q9UK99 471 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 JAG2Q9Y219 1238 aa18■□□□□ 0.47
FOXR1-202ENST00000531539 SASH1O94885 1247 aa17.99■□□□□ 0.47
FOXR1-202ENST00000531539 IFIT1P09914 478 aaKnown RBP17.99■□□□□ 0.47
FOXR1-202ENST00000531539 IL15P40933 162 aaPredicted RBP17.99■□□□□ 0.47
FOXR1-202ENST00000531539 ZNF280AP59817 542 aaPredicted RBP17.99■□□□□ 0.47
FOXR1-202ENST00000531539 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
FOXR1-202ENST00000531539 FMR1Q06787 632 aaKnown RBP eCLIP17.99■□□□□ 0.47
FOXR1-202ENST00000531539 MTX1Q13505 466 aa17.99■□□□□ 0.47
FOXR1-202ENST00000531539 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
FOXR1-202ENST00000531539 KIF4BQ2VIQ3 1234 aa17.99■□□□□ 0.47
FOXR1-202ENST00000531539 FBXO33Q7Z6M2 555 aa17.99■□□□□ 0.47
FOXR1-202ENST00000531539 OGFOD1Q8N543 542 aa17.99■□□□□ 0.47
FOXR1-202ENST00000531539 IQSEC3Q9UPP2 1182 aaPredicted RBP17.99■□□□□ 0.47
FOXR1-202ENST00000531539 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
FOXR1-202ENST00000531539 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
FOXR1-202ENST00000531539 FRAT2O75474 233 aaPredicted RBP17.98■□□□□ 0.47
FOXR1-202ENST00000531539 BCAMP50895 628 aa17.98■□□□□ 0.47
FOXR1-202ENST00000531539 USP48Q86UV5 1035 aa17.98■□□□□ 0.47
FOXR1-202ENST00000531539 KIAA0825Q8IV33 1275 aa17.98■□□□□ 0.47
FOXR1-202ENST00000531539 TDRD7Q8NHU6 1098 aaKnown RBP17.98■□□□□ 0.47
FOXR1-202ENST00000531539 GLIS2Q9BZE0 524 aaPredicted RBP17.98■□□□□ 0.47
FOXR1-202ENST00000531539 MYOZ2Q9NPC6 264 aa17.98■□□□□ 0.47
FOXR1-202ENST00000531539 MYO3BQ8WXR4 1341 aa17.98■□□□□ 0.47
FOXR1-202ENST00000531539 TRAF5O00463 557 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 SLC5A1P13866 664 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 FGFR2P21802 821 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.47
FOXR1-202ENST00000531539 SCARF1Q14162 830 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 CDC37L1Q7L3B6 337 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 DNAJC5GQ8N7S2 189 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 LPIN2Q92539 896 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 DCPSQ96C86 337 aaKnown RBP17.97■□□□□ 0.47
FOXR1-202ENST00000531539 COG6Q9Y2V7 657 aa17.97■□□□□ 0.47
FOXR1-202ENST00000531539 F8W031 263 aaPredicted RBP17.96■□□□□ 0.47
FOXR1-202ENST00000531539 ATP2B3Q16720 1220 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms