RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 TRIM27P14373 513 aa23.85■■□□□ 1.41
UBXN1-211ENST00000531056 INTS3Q68E01 1043 aaKnown RBP23.85■■□□□ 1.41
UBXN1-211ENST00000531056 RSBN1LQ6PCB5 846 aaPredicted RBP23.85■■□□□ 1.41
UBXN1-211ENST00000531056 PUS3Q9BZE2 481 aaKnown RBP23.85■■□□□ 1.41
UBXN1-211ENST00000531056 USP17L3A6NCW0 530 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 USP17L4A6NCW7 530 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 USP17L1Q7RTZ2 530 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 AGBL3Q8NEM8 1001 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 GMLQ99445 158 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 CREBZFQ9NS37 354 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 PGAP2Q9UHJ9 254 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 TNNQ9UQP3 1299 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 RIPOR2Q9Y4F9 1068 aa23.84■■□□□ 1.41
UBXN1-211ENST00000531056 IPO8O15397 1037 aaKnown RBP23.83■■□□□ 1.41
UBXN1-211ENST00000531056 UBTFL1P0CB47 393 aaPredicted RBP23.83■■□□□ 1.41
UBXN1-211ENST00000531056 ATF7IPQ6VMQ6 1270 aa23.83■■□□□ 1.41
UBXN1-211ENST00000531056 SAMD7Q7Z3H4 446 aa23.83■■□□□ 1.41
UBXN1-211ENST00000531056 KLRG1Q96E93 195 aa23.83■■□□□ 1.41
UBXN1-211ENST00000531056 TRPM7Q96QT4 1865 aa23.83■■□□□ 1.4
UBXN1-211ENST00000531056 EGFRP00533 1210 aa23.82■■□□□ 1.4
UBXN1-211ENST00000531056 ZC3H15Q8WU90 426 aaKnown RBP23.82■■□□□ 1.4
UBXN1-211ENST00000531056 MEIS3Q99687 375 aa23.82■■□□□ 1.4
UBXN1-211ENST00000531056 PLIN1O60240 522 aa23.81■■□□□ 1.4
UBXN1-211ENST00000531056 RFX5P48382 616 aaPredicted RBP23.81■■□□□ 1.4
UBXN1-211ENST00000531056 LRRC24Q50LG9 513 aa23.81■■□□□ 1.4
UBXN1-211ENST00000531056 DACT2Q5SW24 774 aa23.81■■□□□ 1.4
UBXN1-211ENST00000531056 FRAT1Q92837 279 aaPredicted RBP23.81■■□□□ 1.4
UBXN1-211ENST00000531056 MROH5Q6ZUA9 1318 aa23.81■■□□□ 1.4
UBXN1-211ENST00000531056 ZNF280AP59817 542 aaPredicted RBP23.8■■□□□ 1.4
UBXN1-211ENST00000531056 TBC1D10BQ4KMP7 808 aaPredicted RBP23.8■■□□□ 1.4
UBXN1-211ENST00000531056 STRIP1Q5VSL9 837 aa23.8■■□□□ 1.4
UBXN1-211ENST00000531056 KLHDC4Q8TBB5 520 aa23.8■■□□□ 1.4
UBXN1-211ENST00000531056 CD209Q9NNX6 404 aa23.8■■□□□ 1.4
UBXN1-211ENST00000531056 UBE4AQ14139 1066 aa23.79■■□□□ 1.4
UBXN1-211ENST00000531056 LRRFIP2Q9Y608 721 aaKnown RBP23.79■■□□□ 1.4
UBXN1-211ENST00000531056 TMEM88BA6NKF7 163 aa23.78■■□□□ 1.4
UBXN1-211ENST00000531056 FMR1Q06787 632 aaKnown RBP eCLIP23.78■■□□□ 1.4
UBXN1-211ENST00000531056 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
UBXN1-211ENST00000531056 VGLL2Q8N8G2 317 aa23.78■■□□□ 1.4
UBXN1-211ENST00000531056 MXD3Q9BW11 206 aa23.78■■□□□ 1.4
UBXN1-211ENST00000531056 TRAF5O00463 557 aa23.77■■□□□ 1.4
UBXN1-211ENST00000531056 IL1R1P14778 569 aa23.77■■□□□ 1.4
UBXN1-211ENST00000531056 PTPN12Q05209 780 aaKnown RBP23.77■■□□□ 1.4
UBXN1-211ENST00000531056 ZKSCAN2Q63HK3 967 aa23.77■■□□□ 1.4
UBXN1-211ENST00000531056 ZNF804AQ7Z570 1209 aa23.77■■□□□ 1.4
UBXN1-211ENST00000531056 MYO3BQ8WXR4 1341 aa23.77■■□□□ 1.4
UBXN1-211ENST00000531056 USP17L8P0C7I0 530 aa23.76■■□□□ 1.39
UBXN1-211ENST00000531056 TTLL5Q6EMB2 1281 aa23.76■■□□□ 1.39
UBXN1-211ENST00000531056 FBXW7Q969H0 707 aa23.76■■□□□ 1.39
UBXN1-211ENST00000531056 CLUAP1Q96AJ1 413 aa23.76■■□□□ 1.39
UBXN1-211ENST00000531056 GLIS2Q9BZE0 524 aaPredicted RBP23.76■■□□□ 1.39
UBXN1-211ENST00000531056 HDAC5Q9UQL6 1122 aa23.76■■□□□ 1.39
UBXN1-211ENST00000531056 GNAI3P08754 354 aa23.75■■□□□ 1.39
UBXN1-211ENST00000531056 GTF2IP78347 998 aa23.75■■□□□ 1.39
UBXN1-211ENST00000531056 METTL24Q5JXM2 366 aa23.75■■□□□ 1.39
UBXN1-211ENST00000531056 RBM26Q5T8P6 1007 aaKnown RBP23.75■■□□□ 1.39
UBXN1-211ENST00000531056 JMYQ8N9B5 988 aa23.75■■□□□ 1.39
UBXN1-211ENST00000531056 ARAP2Q8WZ64 1704 aa23.75■■□□□ 1.39
UBXN1-211ENST00000531056 POLR2AP24928 1970 aaKnown RBP23.74■■□□□ 1.39
UBXN1-211ENST00000531056 EYA2O00167 538 aa23.74■■□□□ 1.39
UBXN1-211ENST00000531056 MYOZ2Q9NPC6 264 aa23.74■■□□□ 1.39
UBXN1-211ENST00000531056 CNTNAP1P78357 1384 aa23.74■■□□□ 1.39
UBXN1-211ENST00000531056 PDE8BO95263 885 aa23.73■■□□□ 1.39
UBXN1-211ENST00000531056 CDC37L1Q7L3B6 337 aa23.73■■□□□ 1.39
UBXN1-211ENST00000531056 TMEM57Q8N5G2 664 aa23.73■■□□□ 1.39
UBXN1-211ENST00000531056 CST9Q5W186 159 aa23.72■■□□□ 1.39
UBXN1-211ENST00000531056 ATG9AQ7Z3C6 839 aa23.72■■□□□ 1.39
UBXN1-211ENST00000531056 FAM84BQ96KN1 310 aaPredicted RBP23.72■■□□□ 1.39
UBXN1-211ENST00000531056 ASTN2O75129 1339 aaPredicted RBP23.72■■□□□ 1.39
UBXN1-211ENST00000531056 GYG1P46976 350 aa23.71■■□□□ 1.39
UBXN1-211ENST00000531056 CERS5Q8N5B7 392 aa23.71■■□□□ 1.39
UBXN1-211ENST00000531056 TDRD7Q8NHU6 1098 aaKnown RBP23.71■■□□□ 1.39
UBXN1-211ENST00000531056 GGA3Q9NZ52 723 aa23.71■■□□□ 1.39
UBXN1-211ENST00000531056 MKRN1Q9UHC7 482 aaKnown RBP23.71■■□□□ 1.39
UBXN1-211ENST00000531056 FBXO3Q9UK99 471 aa23.71■■□□□ 1.39
UBXN1-211ENST00000531056 CIAO1O76071 339 aa23.7■■□□□ 1.38
UBXN1-211ENST00000531056 FGFR2P21802 821 aa23.7■■□□□ 1.38
UBXN1-211ENST00000531056 HIBADHP31937 336 aaKnown RBP23.7■■□□□ 1.38
UBXN1-211ENST00000531056 MTX1Q13505 466 aa23.7■■□□□ 1.38
UBXN1-211ENST00000531056 USP48Q86UV5 1035 aa23.7■■□□□ 1.38
UBXN1-211ENST00000531056 RASSF10A6NK89 507 aa23.69■■□□□ 1.38
UBXN1-211ENST00000531056 MMP14P50281 582 aa23.69■■□□□ 1.38
UBXN1-211ENST00000531056 FKBP1AP62942 108 aaKnown RBP23.69■■□□□ 1.38
UBXN1-211ENST00000531056 SCARF1Q14162 830 aa23.69■■□□□ 1.38
UBXN1-211ENST00000531056 PUM3Q15397 648 aaKnown RBP23.69■■□□□ 1.38
UBXN1-211ENST00000531056 KRT26Q7Z3Y9 468 aa23.69■■□□□ 1.38
UBXN1-211ENST00000531056 FBXO33Q7Z6M2 555 aa23.69■■□□□ 1.38
UBXN1-211ENST00000531056 KIAA0825Q8IV33 1275 aa23.69■■□□□ 1.38
UBXN1-211ENST00000531056 DCPSQ96C86 337 aaKnown RBP23.69■■□□□ 1.38
UBXN1-211ENST00000531056 PA2G4Q9UQ80 394 aaKnown RBP23.69■■□□□ 1.38
UBXN1-211ENST00000531056 FAM205AQ6ZU69 1335 aa23.68■■□□□ 1.38
UBXN1-211ENST00000531056 ADM5C9JUS6 153 aa23.68■■□□□ 1.38
UBXN1-211ENST00000531056 SASH1O94885 1247 aa23.68■■□□□ 1.38
UBXN1-211ENST00000531056 RLBP1P12271 317 aa23.68■■□□□ 1.38
UBXN1-211ENST00000531056 DZIP1LQ8IYY4 767 aaKnown RBP23.68■■□□□ 1.38
UBXN1-211ENST00000531056 OGFOD1Q8N543 542 aa23.68■■□□□ 1.38
UBXN1-211ENST00000531056 SIL1Q9H173 461 aa23.68■■□□□ 1.38
UBXN1-211ENST00000531056 COPRSQ9NQ92 184 aa23.68■■□□□ 1.38
UBXN1-211ENST00000531056 CELF2O95319 508 aaKnown RBP23.67■■□□□ 1.38
UBXN1-211ENST00000531056 GNAI2P04899 355 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms