RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 NBPF9Q3BBW0 867 aa17.15■□□□□ 0.34
HIF3A-214ENST00000531043 CCDC30Q5VVM6 783 aa17.15■□□□□ 0.34
HIF3A-214ENST00000531043 G2E3Q7L622 706 aa17.15■□□□□ 0.34
HIF3A-214ENST00000531043 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
HIF3A-214ENST00000531043 TSR2Q969E8 191 aaKnown RBP17.15■□□□□ 0.34
HIF3A-214ENST00000531043 KLRK1P26718 216 aa17.14■□□□□ 0.33
HIF3A-214ENST00000531043 DACT2Q5SW24 774 aa17.14■□□□□ 0.33
HIF3A-214ENST00000531043 KSR2Q6VAB6 950 aa17.14■□□□□ 0.33
HIF3A-214ENST00000531043 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
HIF3A-214ENST00000531043 PODNQ7Z5L7 613 aa17.13■□□□□ 0.33
HIF3A-214ENST00000531043 DDX58O95786 925 aaKnown RBP17.12■□□□□ 0.33
HIF3A-214ENST00000531043 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
HIF3A-214ENST00000531043 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
HIF3A-214ENST00000531043 CDC5LQ99459 802 aaKnown RBP17.12■□□□□ 0.33
HIF3A-214ENST00000531043 BSDC1Q9NW68 430 aaPredicted RBP17.12■□□□□ 0.33
HIF3A-214ENST00000531043 PITPNM2Q9BZ72 1349 aa17.12■□□□□ 0.33
HIF3A-214ENST00000531043 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
HIF3A-214ENST00000531043 NEURL1BA8MQ27 555 aa17.11■□□□□ 0.33
HIF3A-214ENST00000531043 SASH1O94885 1247 aa17.11■□□□□ 0.33
HIF3A-214ENST00000531043 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
HIF3A-214ENST00000531043 MKRN3Q13064 507 aaKnown RBP17.11■□□□□ 0.33
HIF3A-214ENST00000531043 H7C1W4 665 aa17.1■□□□□ 0.33
HIF3A-214ENST00000531043 WNT10BO00744 389 aa17.1■□□□□ 0.33
HIF3A-214ENST00000531043 TBC1D8O95759 1140 aa17.1■□□□□ 0.33
HIF3A-214ENST00000531043 FKBP1BP68106 108 aa17.1■□□□□ 0.33
HIF3A-214ENST00000531043 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
HIF3A-214ENST00000531043 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
HIF3A-214ENST00000531043 SNAP23O00161 211 aa17.08■□□□□ 0.32
HIF3A-214ENST00000531043 CASP7P55210 303 aa17.08■□□□□ 0.32
HIF3A-214ENST00000531043 TTLL12Q14166 644 aaPredicted RBP17.08■□□□□ 0.32
HIF3A-214ENST00000531043 COA1Q9GZY4 146 aa17.08■□□□□ 0.32
HIF3A-214ENST00000531043 R3HDMLQ9H3Y0 253 aa17.08■□□□□ 0.32
HIF3A-214ENST00000531043 FZD1Q9UP38 647 aa17.08■□□□□ 0.32
HIF3A-214ENST00000531043 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
HIF3A-214ENST00000531043 PRKG1Q13976 671 aa17.07■□□□□ 0.32
HIF3A-214ENST00000531043 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
HIF3A-214ENST00000531043 ZNF296Q8WUU4 475 aaPredicted RBP17.07■□□□□ 0.32
HIF3A-214ENST00000531043 HPS5Q9UPZ3 1129 aa17.07■□□□□ 0.32
HIF3A-214ENST00000531043 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 ITGA6P23229 1130 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 GCKRQ14397 625 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 KIAA0825Q8IV33 1275 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 PCDHAC2Q9Y5I4 1007 aa17.06■□□□□ 0.32
HIF3A-214ENST00000531043 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
HIF3A-214ENST00000531043 GTF2IP78347 998 aa17.05■□□□□ 0.32
HIF3A-214ENST00000531043 TWISTNBQ3B726 338 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-214ENST00000531043 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-214ENST00000531043 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
HIF3A-214ENST00000531043 ZBED3Q96IU2 234 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-214ENST00000531043 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
HIF3A-214ENST00000531043 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
HIF3A-214ENST00000531043 IRS2Q9Y4H2 1338 aa17.04■□□□□ 0.32
HIF3A-214ENST00000531043 CSF1RP07333 972 aa17.04■□□□□ 0.32
HIF3A-214ENST00000531043 TM4SF4P48230 202 aa17.04■□□□□ 0.32
HIF3A-214ENST00000531043 WWC1Q8IX03 1113 aa17.04■□□□□ 0.32
HIF3A-214ENST00000531043 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
HIF3A-214ENST00000531043 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
HIF3A-214ENST00000531043 AOX1Q06278 1338 aa17.03■□□□□ 0.32
HIF3A-214ENST00000531043 MYO3BQ8WXR4 1341 aa17.03■□□□□ 0.32
HIF3A-214ENST00000531043 CHRNDQ07001 517 aa17.03■□□□□ 0.32
HIF3A-214ENST00000531043 FLIIQ13045 1269 aa17.03■□□□□ 0.32
HIF3A-214ENST00000531043 HELBQ8NG08 1087 aaPredicted RBP17.03■□□□□ 0.32
HIF3A-214ENST00000531043 HDAC9Q9UKV0 1011 aa17.03■□□□□ 0.32
HIF3A-214ENST00000531043 CACNA1FO60840 1977 aa17.02■□□□□ 0.32
HIF3A-214ENST00000531043 GPR25O00155 361 aa17.02■□□□□ 0.32
HIF3A-214ENST00000531043 TAF5LO75529 589 aa17.02■□□□□ 0.32
HIF3A-214ENST00000531043 MPHOSPH8Q99549 860 aa17.02■□□□□ 0.32
HIF3A-214ENST00000531043 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.32
HIF3A-214ENST00000531043 CD209Q9NNX6 404 aa17.02■□□□□ 0.32
HIF3A-214ENST00000531043 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
HIF3A-214ENST00000531043 LDLRAD1Q5T700 205 aa17.01■□□□□ 0.31
HIF3A-214ENST00000531043 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
HIF3A-214ENST00000531043 ANKRD2Q9GZV1 360 aa17.01■□□□□ 0.31
HIF3A-214ENST00000531043 ANGEL1Q9UNK9 670 aaKnown RBP17.01■□□□□ 0.31
HIF3A-214ENST00000531043 SSC5DA1L4H1 1573 aa17.01■□□□□ 0.31
HIF3A-214ENST00000531043 KIAA0100Q14667 2235 aaKnown RBP17.01■□□□□ 0.31
HIF3A-214ENST00000531043 HTTP42858 3142 aa17.01■□□□□ 0.31
HIF3A-214ENST00000531043 NF2P35240 595 aa17■□□□□ 0.31
HIF3A-214ENST00000531043 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
HIF3A-214ENST00000531043 CCDC27Q2M243 656 aa17■□□□□ 0.31
HIF3A-214ENST00000531043 SPRYD7Q5W111 196 aa17■□□□□ 0.31
HIF3A-214ENST00000531043 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
HIF3A-214ENST00000531043 APOBEC3FQ8IUX4 373 aaKnown RBP17■□□□□ 0.31
HIF3A-214ENST00000531043 CLMNQ96JQ2 1002 aa17■□□□□ 0.31
HIF3A-214ENST00000531043 JAG2Q9Y219 1238 aa17■□□□□ 0.31
HIF3A-214ENST00000531043 ECM29Q5VYK3 1845 aa16.99■□□□□ 0.31
HIF3A-214ENST00000531043 F8W031 263 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-214ENST00000531043 KCNJ4P48050 445 aa16.99■□□□□ 0.31
HIF3A-214ENST00000531043 FOXO4P98177 505 aa16.99■□□□□ 0.31
HIF3A-214ENST00000531043 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
HIF3A-214ENST00000531043 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
HIF3A-214ENST00000531043 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
HIF3A-214ENST00000531043 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
HIF3A-214ENST00000531043 CLRN2A0PK11 232 aa16.98■□□□□ 0.31
HIF3A-214ENST00000531043 F6X3S4 739 aa16.98■□□□□ 0.31
HIF3A-214ENST00000531043 PKN2Q16513 984 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms