RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 G3BP1Q13283 466 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCS-206ENST00000530961 C15orf52Q6ZUT6 534 aaKnown RBP18.97■□□□□ 0.63
CCS-206ENST00000530961 CRBNQ96SW2 442 aa18.97■□□□□ 0.63
CCS-206ENST00000530961 CEP126Q9P2H0 1117 aa18.97■□□□□ 0.63
CCS-206ENST00000530961 COL4A1P02462 1669 aa18.97■□□□□ 0.63
CCS-206ENST00000530961 DPY19L2Q6NUT2 758 aa18.96■□□□□ 0.63
CCS-206ENST00000530961 ZNRF3Q9ULT6 936 aa18.96■□□□□ 0.63
CCS-206ENST00000530961 NOP58Q9Y2X3 529 aaKnown RBP18.96■□□□□ 0.63
CCS-206ENST00000530961 MED23Q9ULK4 1368 aa18.95■□□□□ 0.62
CCS-206ENST00000530961 WTIPA6NIX2 430 aaPredicted RBP18.95■□□□□ 0.62
CCS-206ENST00000530961 G3V3G9 751 aa18.95■□□□□ 0.62
CCS-206ENST00000530961 DCAF8Q5TAQ9 597 aa18.95■□□□□ 0.62
CCS-206ENST00000530961 VGLL2Q8N8G2 317 aa18.95■□□□□ 0.62
CCS-206ENST00000530961 ARFGEF1Q9Y6D6 1849 aa18.95■□□□□ 0.62
CCS-206ENST00000530961 SURF6O75683 361 aaKnown RBP18.94■□□□□ 0.62
CCS-206ENST00000530961 EIF6P56537 245 aaKnown RBP18.94■□□□□ 0.62
CCS-206ENST00000530961 PUM3Q15397 648 aaKnown RBP18.94■□□□□ 0.62
CCS-206ENST00000530961 PODNQ7Z5L7 613 aa18.94■□□□□ 0.62
CCS-206ENST00000530961 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
CCS-206ENST00000530961 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
CCS-206ENST00000530961 GLTPD2A6NH11 291 aa18.93■□□□□ 0.62
CCS-206ENST00000530961 SNAP23O00161 211 aa18.93■□□□□ 0.62
CCS-206ENST00000530961 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
CCS-206ENST00000530961 HSP90AB4PQ58FF6 505 aa18.93■□□□□ 0.62
CCS-206ENST00000530961 SIRT2Q8IXJ6 389 aa18.93■□□□□ 0.62
CCS-206ENST00000530961 COA1Q9GZY4 146 aa18.93■□□□□ 0.62
CCS-206ENST00000530961 WBP1LQ9NX94 342 aa18.93■□□□□ 0.62
CCS-206ENST00000530961 IFIT1P09914 478 aaKnown RBP18.92■□□□□ 0.62
CCS-206ENST00000530961 OS9Q13438 667 aaPredicted RBP18.92■□□□□ 0.62
CCS-206ENST00000530961 DOK7Q18PE1 504 aa18.92■□□□□ 0.62
CCS-206ENST00000530961 LPIN2Q92539 896 aa18.92■□□□□ 0.62
CCS-206ENST00000530961 AKAP2Q9Y2D5 859 aa18.92■□□□□ 0.62
CCS-206ENST00000530961 ECE2O60344 883 aa18.91■□□□□ 0.62
CCS-206ENST00000530961 FGFR2P21802 821 aa18.91■□□□□ 0.62
CCS-206ENST00000530961 TXNRD3Q86VQ6 643 aa18.91■□□□□ 0.62
CCS-206ENST00000530961 DBNDD1Q9H9R9 158 aa18.91■□□□□ 0.62
CCS-206ENST00000530961 PDE4DIPQ5VU43 2346 aa18.91■□□□□ 0.62
CCS-206ENST00000530961 DUOX1Q9NRD9 1551 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 HSPA8P11142 646 aaKnown RBP18.9■□□□□ 0.62
CCS-206ENST00000530961 SLC5A1P13866 664 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 KLRK1P26718 216 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 CXCL9Q07325 125 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 TFCP2Q12800 502 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 TNIP1Q15025 636 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 ZNF804AQ7Z570 1209 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 ERC1Q8IUD2 1116 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 GPC2Q8N158 579 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 IRS2Q9Y4H2 1338 aa18.9■□□□□ 0.62
CCS-206ENST00000530961 LRRC37AA6NMS7 1700 aa18.89■□□□□ 0.61
CCS-206ENST00000530961 YDJCA8MPS7 323 aa18.89■□□□□ 0.61
CCS-206ENST00000530961 SASH1O94885 1247 aa18.89■□□□□ 0.61
CCS-206ENST00000530961 HIBADHP31937 336 aaKnown RBP18.89■□□□□ 0.61
CCS-206ENST00000530961 ATP2B3Q16720 1220 aa18.89■□□□□ 0.61
CCS-206ENST00000530961 CIAPIN1Q6FI81 312 aa18.89■□□□□ 0.61
CCS-206ENST00000530961 CD209Q9NNX6 404 aa18.89■□□□□ 0.61
CCS-206ENST00000530961 PCDHB15Q9Y5E8 787 aa18.89■□□□□ 0.61
CCS-206ENST00000530961 FBXO33Q7Z6M2 555 aa18.88■□□□□ 0.61
CCS-206ENST00000530961 EXOC6Q8TAG9 804 aa18.88■□□□□ 0.61
CCS-206ENST00000530961 FAM84BQ96KN1 310 aaPredicted RBP18.88■□□□□ 0.61
CCS-206ENST00000530961 GPR108Q9NPR9 543 aa18.88■□□□□ 0.61
CCS-206ENST00000530961 ZNF541Q9H0D2 1346 aa18.88■□□□□ 0.61
CCS-206ENST00000530961 RAB11FIP3O75154 756 aa18.87■□□□□ 0.61
CCS-206ENST00000530961 RAD17O75943 681 aa18.87■□□□□ 0.61
CCS-206ENST00000530961 DDNO94850 711 aaPredicted RBP18.87■□□□□ 0.61
CCS-206ENST00000530961 IL1R1P14778 569 aa18.87■□□□□ 0.61
CCS-206ENST00000530961 VPS37DQ86XT2 251 aa18.87■□□□□ 0.61
CCS-206ENST00000530961 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
CCS-206ENST00000530961 GYG1P46976 350 aa18.86■□□□□ 0.61
CCS-206ENST00000530961 L3MBTL3Q96JM7 780 aaPredicted RBP18.86■□□□□ 0.61
CCS-206ENST00000530961 EXOC6BQ9Y2D4 811 aa18.86■□□□□ 0.61
CCS-206ENST00000530961 A0A1B0GUL7 405 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 USP17L3A6NCW0 530 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 USP17L4A6NCW7 530 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
CCS-206ENST00000530961 VEGFBP49765 207 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 TIMM10P62072 90 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 STRIP1Q5VSL9 837 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 USP17L1Q7RTZ2 530 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 TDRD7Q8NHU6 1098 aaKnown RBP18.85■□□□□ 0.61
CCS-206ENST00000530961 KIF1BPQ96EK5 621 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 GJA3Q9Y6H8 435 aa18.85■□□□□ 0.61
CCS-206ENST00000530961 MYH3P11055 1940 aa18.84■□□□□ 0.61
CCS-206ENST00000530961 PSMD14O00487 310 aa18.84■□□□□ 0.61
CCS-206ENST00000530961 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
CCS-206ENST00000530961 KCNQ5Q9NR82 932 aa18.84■□□□□ 0.61
CCS-206ENST00000530961 GNL3LQ9NVN8 582 aaKnown RBP18.84■□□□□ 0.61
CCS-206ENST00000530961 COL4A5P29400 1685 aa18.84■□□□□ 0.61
CCS-206ENST00000530961 IQCA1LA6NCM1 817 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 ZBTB22O15209 634 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 RPS12P25398 132 aaKnown RBP18.83■□□□□ 0.6
CCS-206ENST00000530961 BCAMP50895 628 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 MAP2K1Q02750 393 aaPredicted RBP18.83■□□□□ 0.6
CCS-206ENST00000530961 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.6
CCS-206ENST00000530961 TNNI3KQ59H18 835 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 TTLL5Q6EMB2 1281 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 CHADLQ6NUI6 762 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 RHPN1Q8TCX5 695 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 XAGE2Q96GT9 111 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms