RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ZNF512BQ96KM6 892 aaPredicted RBP20.31■□□□□ 0.84
BRCA2-204ENST00000530893 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 MYH3P11055 1940 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 GIMAP6Q6P9H5 292 aa20.3■□□□□ 0.84
BRCA2-204ENST00000530893 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
BRCA2-204ENST00000530893 DDX19AQ9NUU7 478 aaKnown RBP20.3■□□□□ 0.84
BRCA2-204ENST00000530893 NSUN7Q8NE18 718 aaKnown RBP20.29■□□□□ 0.84
BRCA2-204ENST00000530893 OSBP2Q969R2 916 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 NUP62CLQ9H1M0 184 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 MYH7P12883 1935 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 M0R2C6 588 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 CYP19A1P11511 503 aaPredicted RBP20.29■□□□□ 0.84
BRCA2-204ENST00000530893 EVCP57679 992 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 ATL3Q6DD88 541 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 APPBP2Q92624 585 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 RIPOR2Q9Y4F9 1068 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
BRCA2-204ENST00000530893 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.29■□□□□ 0.84
BRCA2-204ENST00000530893 KDM4AO75164 1064 aa20.28■□□□□ 0.84
BRCA2-204ENST00000530893 PTMAP06454 111 aaKnown RBP20.28■□□□□ 0.84
BRCA2-204ENST00000530893 ADORA1P30542 326 aa20.28■□□□□ 0.84
BRCA2-204ENST00000530893 SLFNL1Q499Z3 407 aa20.28■□□□□ 0.84
BRCA2-204ENST00000530893 FAM173BQ6P4H8 233 aa20.28■□□□□ 0.84
BRCA2-204ENST00000530893 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
BRCA2-204ENST00000530893 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 TERF1P54274 439 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 CTSWP56202 376 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 ATP2B3Q16720 1220 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 IMMTQ16891 758 aaKnown RBP20.27■□□□□ 0.84
BRCA2-204ENST00000530893 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 LRRC2Q9BYS8 371 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 TPRNQ4KMQ1 711 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 LDHAL6AQ6ZMR3 332 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.27■□□□□ 0.84
BRCA2-204ENST00000530893 USP25Q9UHP3 1055 aa20.27■□□□□ 0.84
BRCA2-204ENST00000530893 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.83
BRCA2-204ENST00000530893 MYH15Q9Y2K3 1946 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 ITGA6P23229 1130 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 APOBRQ0VD83 1088 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 METTL24Q5JXM2 366 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 PTPDC1A2A3K4 754 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
BRCA2-204ENST00000530893 TTF1Q15361 905 aaPredicted RBP20.26■□□□□ 0.83
BRCA2-204ENST00000530893 HLFQ16534 295 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 WASHC4Q2M389 1173 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 RBM43Q6ZSC3 357 aaKnown RBP20.26■□□□□ 0.83
BRCA2-204ENST00000530893 AK7Q96M32 723 aa20.26■□□□□ 0.83
BRCA2-204ENST00000530893 TFIP11Q9UBB9 837 aaKnown RBP20.26■□□□□ 0.83
BRCA2-204ENST00000530893 NUP98P52948 1817 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 COL22A1Q8NFW1 1626 aaPredicted RBP20.25■□□□□ 0.83
BRCA2-204ENST00000530893 EXOC5O00471 708 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 CTDNEP1O95476 244 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 ADCY5O95622 1261 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 LIG1P18858 919 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 PDIA3P30101 505 aaKnown RBP20.25■□□□□ 0.83
BRCA2-204ENST00000530893 DDX11Q96FC9 970 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 NWD2Q9ULI1 1742 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 WNK3Q9BYP7 1800 aa20.25■□□□□ 0.83
BRCA2-204ENST00000530893 PDE8AO60658 829 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 TPM2P07951 284 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 ZAP70P43403 619 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 TNMDQ9H2S6 317 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 DACT1Q9NYF0 836 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 AKAP11Q9UKA4 1901 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 IRS4O14654 1257 aaPredicted RBP20.24■□□□□ 0.83
BRCA2-204ENST00000530893 FAM200AQ8TCP9 573 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 CLSTN2Q9H4D0 955 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 GREM2Q9H772 168 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 ATRNO75882 1429 aa20.24■□□□□ 0.83
BRCA2-204ENST00000530893 SCARF1Q14162 830 aa20.23■□□□□ 0.83
BRCA2-204ENST00000530893 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
BRCA2-204ENST00000530893 CNNM1Q9NRU3 951 aa20.23■□□□□ 0.83
BRCA2-204ENST00000530893 TRMT112Q9UI30 125 aaKnown RBP20.23■□□□□ 0.83
BRCA2-204ENST00000530893 FOXP2O15409 715 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 DHX16O60231 1041 aaKnown RBP20.22■□□□□ 0.83
BRCA2-204ENST00000530893 FGAP02671 866 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 GPTP24298 496 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 ZBTB1Q9Y2K1 713 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 PDE8BO95263 885 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 PGBD1Q96JS3 809 aa20.22■□□□□ 0.83
BRCA2-204ENST00000530893 ZNF396Q96N95 335 aaPredicted RBP20.22■□□□□ 0.83
BRCA2-204ENST00000530893 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
BRCA2-204ENST00000530893 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
BRCA2-204ENST00000530893 CAVIN2O95810 425 aa20.21■□□□□ 0.83
BRCA2-204ENST00000530893 TYRO3Q06418 890 aa20.21■□□□□ 0.83
BRCA2-204ENST00000530893 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
BRCA2-204ENST00000530893 NCOA7Q8NI08 942 aa20.21■□□□□ 0.83
BRCA2-204ENST00000530893 BICD2Q8TD16 824 aa20.21■□□□□ 0.83
BRCA2-204ENST00000530893 PUS7LQ9H0K6 701 aaKnown RBP20.21■□□□□ 0.83
BRCA2-204ENST00000530893 RCOR1Q9UKL0 485 aa20.21■□□□□ 0.83
BRCA2-204ENST00000530893 LRP5O75197 1615 aa20.21■□□□□ 0.83
BRCA2-204ENST00000530893 A0A0G2JLW4 131 aa20.2■□□□□ 0.83
BRCA2-204ENST00000530893 ADD1P35611 737 aaKnown RBP20.2■□□□□ 0.83
BRCA2-204ENST00000530893 MCAMP43121 646 aa20.2■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms