RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 CCT4P50991 539 aaKnown RBP19.18■□□□□ 0.66
CAPN1-219ENST00000530495 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
CAPN1-219ENST00000530495 PAPPA2Q9BXP8 1791 aa19.17■□□□□ 0.66
CAPN1-219ENST00000530495 SPEF2Q9C093 1822 aa19.17■□□□□ 0.66
CAPN1-219ENST00000530495 NEURL1BA8MQ27 555 aa19.17■□□□□ 0.66
CAPN1-219ENST00000530495 CWF19L2Q2TBE0 894 aaKnown RBP19.17■□□□□ 0.66
CAPN1-219ENST00000530495 DACT2Q5SW24 774 aa19.17■□□□□ 0.66
CAPN1-219ENST00000530495 RASAL3Q86YV0 1011 aa19.17■□□□□ 0.66
CAPN1-219ENST00000530495 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
CAPN1-219ENST00000530495 ZNF646O15015 1829 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-219ENST00000530495 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
CAPN1-219ENST00000530495 NBPF9Q3BBW0 867 aa19.16■□□□□ 0.66
CAPN1-219ENST00000530495 STRIP1Q5VSL9 837 aa19.16■□□□□ 0.66
CAPN1-219ENST00000530495 OGFOD1Q8N543 542 aa19.16■□□□□ 0.66
CAPN1-219ENST00000530495 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
CAPN1-219ENST00000530495 SLC34A2O95436 690 aa19.15■□□□□ 0.66
CAPN1-219ENST00000530495 MMP14P50281 582 aa19.15■□□□□ 0.66
CAPN1-219ENST00000530495 G2E3Q7L622 706 aa19.15■□□□□ 0.66
CAPN1-219ENST00000530495 MXD3Q9BW11 206 aa19.15■□□□□ 0.66
CAPN1-219ENST00000530495 SCAF8Q9UPN6 1271 aaKnown RBP19.15■□□□□ 0.66
CAPN1-219ENST00000530495 LEMD3Q9Y2U8 911 aa19.15■□□□□ 0.66
CAPN1-219ENST00000530495 MYO3BQ8WXR4 1341 aa19.15■□□□□ 0.66
CAPN1-219ENST00000530495 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
CAPN1-219ENST00000530495 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-219ENST00000530495 MOB2Q70IA6 237 aa19.14■□□□□ 0.65
CAPN1-219ENST00000530495 UBE3BQ7Z3V4 1068 aa19.14■□□□□ 0.65
CAPN1-219ENST00000530495 TXNRD3Q86VQ6 643 aa19.14■□□□□ 0.65
CAPN1-219ENST00000530495 WWC1Q8IX03 1113 aa19.14■□□□□ 0.65
CAPN1-219ENST00000530495 PLA2G12BQ9BX93 195 aa19.14■□□□□ 0.65
CAPN1-219ENST00000530495 UBE2Q2LH0YL09 131 aa19.13■□□□□ 0.65
CAPN1-219ENST00000530495 WNT10BO00744 389 aa19.13■□□□□ 0.65
CAPN1-219ENST00000530495 IGHMBP2P38935 993 aaKnown RBP19.13■□□□□ 0.65
CAPN1-219ENST00000530495 GCKRQ14397 625 aa19.13■□□□□ 0.65
CAPN1-219ENST00000530495 PRAMEF18Q5VWM3 479 aa19.13■□□□□ 0.65
CAPN1-219ENST00000530495 ANKRD2Q9GZV1 360 aa19.13■□□□□ 0.65
CAPN1-219ENST00000530495 ZNF804BA4D1E1 1349 aa19.12■□□□□ 0.65
CAPN1-219ENST00000530495 CSF1RP07333 972 aa19.12■□□□□ 0.65
CAPN1-219ENST00000530495 TTLL5Q6EMB2 1281 aa19.12■□□□□ 0.65
CAPN1-219ENST00000530495 ITGA6P23229 1130 aa19.11■□□□□ 0.65
CAPN1-219ENST00000530495 CASP7P55210 303 aa19.11■□□□□ 0.65
CAPN1-219ENST00000530495 CTU1Q7Z7A3 348 aaKnown RBP19.11■□□□□ 0.65
CAPN1-219ENST00000530495 TNRC18O15417 2968 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-219ENST00000530495 IL16Q14005 1332 aa19.1■□□□□ 0.65
CAPN1-219ENST00000530495 TM4SF4P48230 202 aa19.1■□□□□ 0.65
CAPN1-219ENST00000530495 CCDC184Q52MB2 194 aa19.1■□□□□ 0.65
CAPN1-219ENST00000530495 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
CAPN1-219ENST00000530495 FBXW7Q969H0 707 aa19.1■□□□□ 0.65
CAPN1-219ENST00000530495 MPHOSPH8Q99549 860 aa19.1■□□□□ 0.65
CAPN1-219ENST00000530495 CACNA1FO60840 1977 aa19.1■□□□□ 0.65
CAPN1-219ENST00000530495 NF2P35240 595 aa19.09■□□□□ 0.65
CAPN1-219ENST00000530495 FLIIQ13045 1269 aa19.09■□□□□ 0.65
CAPN1-219ENST00000530495 TTLL12Q14166 644 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-219ENST00000530495 MYH16Q9H6N6 1097 aa19.09■□□□□ 0.65
CAPN1-219ENST00000530495 KLRK1P26718 216 aa19.08■□□□□ 0.64
CAPN1-219ENST00000530495 LINS1Q8NG48 757 aa19.08■□□□□ 0.64
CAPN1-219ENST00000530495 ZBED3Q96IU2 234 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-219ENST00000530495 HDAC9Q9UKV0 1011 aa19.08■□□□□ 0.64
CAPN1-219ENST00000530495 SASH1O94885 1247 aa19.07■□□□□ 0.64
CAPN1-219ENST00000530495 TBC1D8O95759 1140 aa19.07■□□□□ 0.64
CAPN1-219ENST00000530495 GTF2IP78347 998 aa19.07■□□□□ 0.64
CAPN1-219ENST00000530495 CHRNDQ07001 517 aa19.07■□□□□ 0.64
CAPN1-219ENST00000530495 PKN2Q16513 984 aaKnown RBP19.07■□□□□ 0.64
CAPN1-219ENST00000530495 KIAA0825Q8IV33 1275 aa19.07■□□□□ 0.64
CAPN1-219ENST00000530495 DNAAF4Q8WXU2 420 aa19.07■□□□□ 0.64
CAPN1-219ENST00000530495 PTPN12Q05209 780 aaKnown RBP19.06■□□□□ 0.64
CAPN1-219ENST00000530495 FKBP5Q13451 457 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-219ENST00000530495 NOM1Q5C9Z4 860 aaKnown RBP19.06■□□□□ 0.64
CAPN1-219ENST00000530495 APOBEC3FQ8IUX4 373 aaKnown RBP19.06■□□□□ 0.64
CAPN1-219ENST00000530495 ZNF296Q8WUU4 475 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-219ENST00000530495 CD209Q9NNX6 404 aa19.06■□□□□ 0.64
CAPN1-219ENST00000530495 ANKRD18BA2A2Z9 1011 aa19.05■□□□□ 0.64
CAPN1-219ENST00000530495 KCNJ4P48050 445 aa19.05■□□□□ 0.64
CAPN1-219ENST00000530495 SOX10P56693 466 aa19.05■□□□□ 0.64
CAPN1-219ENST00000530495 LDLRAD1Q5T700 205 aa19.05■□□□□ 0.64
CAPN1-219ENST00000530495 C15orf52Q6ZUT6 534 aaKnown RBP19.05■□□□□ 0.64
CAPN1-219ENST00000530495 ARMC9Q7Z3E5 817 aa19.05■□□□□ 0.64
CAPN1-219ENST00000530495 IRS2Q9Y4H2 1338 aa19.04■□□□□ 0.64
CAPN1-219ENST00000530495 VAMP4O75379 141 aa19.04■□□□□ 0.64
CAPN1-219ENST00000530495 HPS5Q9UPZ3 1129 aa19.04■□□□□ 0.64
CAPN1-219ENST00000530495 GPR25O00155 361 aa19.03■□□□□ 0.64
CAPN1-219ENST00000530495 FOXO4P98177 505 aa19.03■□□□□ 0.64
CAPN1-219ENST00000530495 SREBF2Q12772 1141 aa19.03■□□□□ 0.64
CAPN1-219ENST00000530495 MTMR14Q8NCE2 650 aa19.03■□□□□ 0.64
CAPN1-219ENST00000530495 CFHR5Q9BXR6 569 aa19.03■□□□□ 0.64
CAPN1-219ENST00000530495 FANCIQ9NVI1 1328 aa19.02■□□□□ 0.64
CAPN1-219ENST00000530495 TAF5LO75529 589 aa19.02■□□□□ 0.64
CAPN1-219ENST00000530495 MKRN3Q13064 507 aaKnown RBP19.02■□□□□ 0.64
CAPN1-219ENST00000530495 IFIT5Q13325 482 aaKnown RBP19.02■□□□□ 0.64
CAPN1-219ENST00000530495 PRKG1Q13976 671 aa19.02■□□□□ 0.64
CAPN1-219ENST00000530495 DLGAP5Q15398 846 aa19.02■□□□□ 0.64
CAPN1-219ENST00000530495 WDR63Q8IWG1 891 aa19.02■□□□□ 0.64
CAPN1-219ENST00000530495 CERS5Q8N5B7 392 aa19.02■□□□□ 0.64
CAPN1-219ENST00000530495 DEFB129Q9H1M3 183 aa19.02■□□□□ 0.64
CAPN1-219ENST00000530495 SNAP23O00161 211 aa19.01■□□□□ 0.63
CAPN1-219ENST00000530495 IL1R1P14778 569 aa19.01■□□□□ 0.63
CAPN1-219ENST00000530495 SPRYD7Q5W111 196 aa19.01■□□□□ 0.63
CAPN1-219ENST00000530495 HELBQ8NG08 1087 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-219ENST00000530495 ANGEL1Q9UNK9 670 aaKnown RBP19.01■□□□□ 0.63
CAPN1-219ENST00000530495 COL1A1P02452 1464 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-219ENST00000530495 ECM29Q5VYK3 1845 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms