RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	SLC10A3	P09131	477 aa		19.94	■□□□□ 0.78
TM9SF1-209	ENST00000530468	IGHMBP2	P38935	993 aa	Known RBP	19.94	■□□□□ 0.78
TM9SF1-209	ENST00000530468	KIF23	Q02241	960 aa	Predicted RBP	19.94	■□□□□ 0.78
TM9SF1-209	ENST00000530468	G2E3	Q7L622	706 aa		19.94	■□□□□ 0.78
TM9SF1-209	ENST00000530468	MYO3B	Q8WXR4	1341 aa		19.94	■□□□□ 0.78
TM9SF1-209	ENST00000530468	FLII	Q13045	1269 aa		19.93	■□□□□ 0.78
TM9SF1-209	ENST00000530468	GCKR	Q14397	625 aa		19.93	■□□□□ 0.78
TM9SF1-209	ENST00000530468	COA1	Q9GZY4	146 aa		19.93	■□□□□ 0.78
TM9SF1-209	ENST00000530468	MYH16	Q9H6N6	1097 aa		19.93	■□□□□ 0.78
TM9SF1-209	ENST00000530468	LEMD3	Q9Y2U8	911 aa		19.93	■□□□□ 0.78
TM9SF1-209	ENST00000530468	MYH3	P11055	1940 aa		19.93	■□□□□ 0.78
TM9SF1-209	ENST00000530468	MMP14	P50281	582 aa		19.92	■□□□□ 0.78
TM9SF1-209	ENST00000530468	STRIP1	Q5VSL9	837 aa		19.92	■□□□□ 0.78
TM9SF1-209	ENST00000530468	REM2	Q8IYK8	340 aa	Predicted RBP	19.92	■□□□□ 0.78
TM9SF1-209	ENST00000530468	OGFOD1	Q8N543	542 aa		19.92	■□□□□ 0.78
TM9SF1-209	ENST00000530468	ANKRD2	Q9GZV1	360 aa		19.92	■□□□□ 0.78
TM9SF1-209	ENST00000530468	WTIP	A6NIX2	430 aa	Predicted RBP	19.91	■□□□□ 0.78
TM9SF1-209	ENST00000530468	ITGA6	P23229	1130 aa		19.91	■□□□□ 0.78
TM9SF1-209	ENST00000530468	FKBP5	Q13451	457 aa	Predicted RBP	19.91	■□□□□ 0.78
TM9SF1-209	ENST00000530468	DGKZ	Q13574	1117 aa		19.91	■□□□□ 0.78
TM9SF1-209	ENST00000530468	DACT2	Q5SW24	774 aa		19.91	■□□□□ 0.78
TM9SF1-209	ENST00000530468	DNAAF4	Q8WXU2	420 aa		19.91	■□□□□ 0.78
TM9SF1-209	ENST00000530468	PAPPA2	Q9BXP8	1791 aa		19.9	■□□□□ 0.78
TM9SF1-209	ENST00000530468	RGS19	P49795	217 aa		19.9	■□□□□ 0.78
TM9SF1-209	ENST00000530468	FAM161A	Q3B820	660 aa		19.9	■□□□□ 0.78
TM9SF1-209	ENST00000530468	LINS1	Q8NG48	757 aa		19.9	■□□□□ 0.78
TM9SF1-209	ENST00000530468	MPHOSPH8	Q99549	860 aa		19.9	■□□□□ 0.78
TM9SF1-209	ENST00000530468	FANCI	Q9NVI1	1328 aa		19.9	■□□□□ 0.78
TM9SF1-209	ENST00000530468	ZNF804B	A4D1E1	1349 aa		19.89	■□□□□ 0.77
TM9SF1-209	ENST00000530468	CSF1R	P07333	972 aa		19.89	■□□□□ 0.77
TM9SF1-209	ENST00000530468	CASP7	P55210	303 aa		19.89	■□□□□ 0.77
TM9SF1-209	ENST00000530468	RASAL3	Q86YV0	1011 aa		19.89	■□□□□ 0.77
TM9SF1-209	ENST00000530468	FBXW7	Q969H0	707 aa		19.89	■□□□□ 0.77
TM9SF1-209	ENST00000530468	RNF186	Q9NXI6	227 aa		19.89	■□□□□ 0.77
TM9SF1-209	ENST00000530468	CASP8AP2	Q9UKL3	1982 aa		19.88	■□□□□ 0.77
TM9SF1-209	ENST00000530468	SPEF2	Q9C093	1822 aa		19.88	■□□□□ 0.77
TM9SF1-209	ENST00000530468	CSRNP1	Q96S65	589 aa		19.88	■□□□□ 0.77
TM9SF1-209	ENST00000530468	MRS2	Q9HD23	443 aa		19.88	■□□□□ 0.77
TM9SF1-209	ENST00000530468	WNT10B	O00744	389 aa		19.87	■□□□□ 0.77
TM9SF1-209	ENST00000530468	TRPA1	O75762	1119 aa		19.87	■□□□□ 0.77
TM9SF1-209	ENST00000530468	MLLT1	Q03111	559 aa	Predicted RBP	19.87	■□□□□ 0.77
TM9SF1-209	ENST00000530468	NBPF9	Q3BBW0	867 aa		19.87	■□□□□ 0.77
TM9SF1-209	ENST00000530468	TXNRD3	Q86VQ6	643 aa		19.87	■□□□□ 0.77
TM9SF1-209	ENST00000530468	WDR63	Q8IWG1	891 aa		19.87	■□□□□ 0.77
TM9SF1-209	ENST00000530468	HDAC9	Q9UKV0	1011 aa		19.87	■□□□□ 0.77
TM9SF1-209	ENST00000530468	KCNJ4	P48050	445 aa		19.86	■□□□□ 0.77
TM9SF1-209	ENST00000530468	TTLL5	Q6EMB2	1281 aa		19.86	■□□□□ 0.77
TM9SF1-209	ENST00000530468	MXD3	Q9BW11	206 aa		19.86	■□□□□ 0.77
TM9SF1-209	ENST00000530468	ANKRD18B	A2A2Z9	1011 aa		19.85	■□□□□ 0.77
TM9SF1-209	ENST00000530468	VAMP4	O75379	141 aa		19.85	■□□□□ 0.77
TM9SF1-209	ENST00000530468	NF2	P35240	595 aa		19.85	■□□□□ 0.77
TM9SF1-209	ENST00000530468	CHRND	Q07001	517 aa		19.85	■□□□□ 0.77
TM9SF1-209	ENST00000530468	ZNF646	O15015	1829 aa	Predicted RBP	19.84	■□□□□ 0.77
TM9SF1-209	ENST00000530468	CACNA1F	O60840	1977 aa		19.83	■□□□□ 0.77
TM9SF1-209	ENST00000530468	KLRK1	P26718	216 aa		19.83	■□□□□ 0.77
TM9SF1-209	ENST00000530468	EXOSC9	Q06265	439 aa	Known RBP	19.83	■□□□□ 0.77
TM9SF1-209	ENST00000530468	TTLL12	Q14166	644 aa	Predicted RBP	19.83	■□□□□ 0.77
TM9SF1-209	ENST00000530468	APOBEC3F	Q8IUX4	373 aa	Known RBP	19.83	■□□□□ 0.77
TM9SF1-209	ENST00000530468	SCAF8	Q9UPN6	1271 aa	Known RBP	19.83	■□□□□ 0.77
TM9SF1-209	ENST00000530468	AKAP11	Q9UKA4	1901 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	UBE2Q2L	H0YL09	131 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	ANP32C	O43423	234 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	SASH1	O94885	1247 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	GTF2I	P78347	998 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	IFIT5	Q13325	482 aa	Known RBP	19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	PRAMEF18	Q5VWM3	479 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	C15orf52	Q6ZUT6	534 aa	Known RBP	19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	MOB2	Q70IA6	237 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	KIAA0825	Q8IV33	1275 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	CD209	Q9NNX6	404 aa		19.82	■□□□□ 0.76
TM9SF1-209	ENST00000530468	BEND3	Q5T5X7	828 aa		19.81	■□□□□ 0.76
TM9SF1-209	ENST00000530468	FOXO4	P98177	505 aa		19.8	■□□□□ 0.76
TM9SF1-209	ENST00000530468	ZBED3	Q96IU2	234 aa	Predicted RBP	19.8	■□□□□ 0.76
TM9SF1-209	ENST00000530468	SALL2	Q9Y467	1007 aa	Predicted RBP	19.8	■□□□□ 0.76
TM9SF1-209	ENST00000530468	COL1A1	P02452	1464 aa	Predicted RBP	19.79	■□□□□ 0.76
TM9SF1-209	ENST00000530468	IRS2	Q9Y4H2	1338 aa		19.79	■□□□□ 0.76
TM9SF1-209	ENST00000530468		F6X3S4	739 aa		19.79	■□□□□ 0.76
TM9SF1-209	ENST00000530468	ARMC9	Q7Z3E5	817 aa		19.79	■□□□□ 0.76
TM9SF1-209	ENST00000530468	ZNF804A	Q7Z570	1209 aa		19.79	■□□□□ 0.76
TM9SF1-209	ENST00000530468	CTU1	Q7Z7A3	348 aa	Known RBP	19.79	■□□□□ 0.76
TM9SF1-209	ENST00000530468	CHMP3	Q9Y3E7	222 aa		19.79	■□□□□ 0.76
TM9SF1-209	ENST00000530468	TAF5L	O75529	589 aa		19.78	■□□□□ 0.76
TM9SF1-209	ENST00000530468	MTMR14	Q8NCE2	650 aa		19.78	■□□□□ 0.76
TM9SF1-209	ENST00000530468	GRM8	O00222	908 aa		19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	IL1R1	P14778	569 aa		19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	TM4SF4	P48230	202 aa		19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	FKBP1A	P62942	108 aa	Known RBP	19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	DLGAP5	Q15398	846 aa		19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	CCDC57	Q2TAC2	916 aa		19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	LMBR1L	Q6UX01	489 aa		19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	HELB	Q8NG08	1087 aa	Predicted RBP	19.77	■□□□□ 0.76
TM9SF1-209	ENST00000530468	SNAP23	O00161	211 aa		19.76	■□□□□ 0.75
TM9SF1-209	ENST00000530468	SREBF2	Q12772	1141 aa		19.76	■□□□□ 0.75
TM9SF1-209	ENST00000530468	TAF7L	Q5H9L4	462 aa		19.76	■□□□□ 0.75
TM9SF1-209	ENST00000530468	PPP2R3B	Q9Y5P8	575 aa		19.76	■□□□□ 0.75
TM9SF1-209	ENST00000530468	ALDH1L1	O75891	902 aa		19.75	■□□□□ 0.75
TM9SF1-209	ENST00000530468	PTPN12	Q05209	780 aa	Known RBP	19.75	■□□□□ 0.75
TM9SF1-209	ENST00000530468	PKN2	Q16513	984 aa	Known RBP	19.75	■□□□□ 0.75
TM9SF1-209	ENST00000530468	NOM1	Q5C9Z4	860 aa	Known RBP	19.75	■□□□□ 0.75
TM9SF1-209	ENST00000530468	LDHAL6A	Q6ZMR3	332 aa		19.75	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms