RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 TTC9Q92623 222 aa9.08□□□□□ -0.96
GMDS-206ENST00000530075 RBSNQ9H1K0 784 aa9.08□□□□□ -0.96
GMDS-206ENST00000530075 BAG6P46379 1132 aa9.07□□□□□ -0.96
GMDS-206ENST00000530075 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.07□□□□□ -0.96
GMDS-206ENST00000530075 EAPPQ56P03 285 aaPredicted RBP9.07□□□□□ -0.96
GMDS-206ENST00000530075 NXPE3Q969Y0 559 aa9.07□□□□□ -0.96
GMDS-206ENST00000530075 TRIM11Q96F44 468 aa9.07□□□□□ -0.96
GMDS-206ENST00000530075 LACRTQ9GZZ8 138 aa9.07□□□□□ -0.96
GMDS-206ENST00000530075 PRDM6Q9NQX0 595 aa9.07□□□□□ -0.96
GMDS-206ENST00000530075 METTL12A8MUP2 240 aa9.06□□□□□ -0.96
GMDS-206ENST00000530075 PDE2AO00408 941 aaPredicted RBP9.06□□□□□ -0.96
GMDS-206ENST00000530075 ERCC3P19447 782 aa9.06□□□□□ -0.96
GMDS-206ENST00000530075 COL19A1Q14993 1142 aa9.06□□□□□ -0.96
GMDS-206ENST00000530075 KIAA0319Q5VV43 1072 aa9.06□□□□□ -0.96
GMDS-206ENST00000530075 SMNDC1O75940 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
GMDS-206ENST00000530075 ILDR2Q71H61 639 aa9.05□□□□□ -0.96
GMDS-206ENST00000530075 TMEM102Q8N9M5 508 aaPredicted RBP9.05□□□□□ -0.96
GMDS-206ENST00000530075 TCF12Q99081 682 aa9.05□□□□□ -0.96
GMDS-206ENST00000530075 SUV39H2Q9H5I1 410 aa9.05□□□□□ -0.96
GMDS-206ENST00000530075 SH2B1Q9NRF2 756 aaPredicted RBP9.05□□□□□ -0.96
GMDS-206ENST00000530075 GRM2Q14416 872 aa9.04□□□□□ -0.96
GMDS-206ENST00000530075 IL22RA1Q8N6P7 574 aa9.04□□□□□ -0.96
GMDS-206ENST00000530075 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
GMDS-206ENST00000530075 EHD4Q9H223 541 aa9.04□□□□□ -0.96
GMDS-206ENST00000530075 MKL2Q9ULH7 1088 aa9.04□□□□□ -0.96
GMDS-206ENST00000530075 GADD45BO75293 160 aaPredicted RBP9.03□□□□□ -0.96
GMDS-206ENST00000530075 GRIA4P48058 902 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 SPRED3Q2MJR0 410 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 MSL1Q68DK7 614 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 ALG1LQ6GMV1 187 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 CCNJLQ8IV13 435 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
GMDS-206ENST00000530075 BEND7Q8N7W2 519 aaPredicted RBP9.03□□□□□ -0.96
GMDS-206ENST00000530075 GLIS3Q8NEA6 775 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 DUSP9Q99956 384 aaKnown RBP9.03□□□□□ -0.96
GMDS-206ENST00000530075 BHLHE41Q9C0J9 482 aaPredicted RBP9.03□□□□□ -0.96
GMDS-206ENST00000530075 LIN7BQ9HAP6 207 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
GMDS-206ENST00000530075 PRPF40AO75400 957 aaKnown RBP9.02□□□□□ -0.97
GMDS-206ENST00000530075 ATP2B2Q01814 1243 aa9.02□□□□□ -0.97
GMDS-206ENST00000530075 NXPE4Q6UWF7 544 aa9.02□□□□□ -0.97
GMDS-206ENST00000530075 ASAP3Q8TDY4 903 aa9.02□□□□□ -0.97
GMDS-206ENST00000530075 FOXD4L4Q8WXT5 416 aaPredicted RBP9.02□□□□□ -0.97
GMDS-206ENST00000530075 PLVAPQ9BX97 442 aa9.02□□□□□ -0.97
GMDS-206ENST00000530075 BCL2L13Q9BXK5 485 aa9.02□□□□□ -0.97
GMDS-206ENST00000530075 OSBPL7Q9BZF2 842 aa9.02□□□□□ -0.97
GMDS-206ENST00000530075 NLRP2Q9NX02 1062 aa9.02□□□□□ -0.97
GMDS-206ENST00000530075 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.97
GMDS-206ENST00000530075 GNB5O14775 395 aa9.01□□□□□ -0.97
GMDS-206ENST00000530075 EPHA1P21709 976 aa9.01□□□□□ -0.97
GMDS-206ENST00000530075 CDC25BP30305 580 aa9.01□□□□□ -0.97
GMDS-206ENST00000530075 FBF1Q8TES7 1133 aa9.01□□□□□ -0.97
GMDS-206ENST00000530075 BCO2Q9BYV7 579 aa9.01□□□□□ -0.97
GMDS-206ENST00000530075 ADAM19Q9H013 955 aa9.01□□□□□ -0.97
GMDS-206ENST00000530075 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
GMDS-206ENST00000530075 PTPRAP18433 802 aa9□□□□□ -0.97
GMDS-206ENST00000530075 COL8A1P27658 744 aa9□□□□□ -0.97
GMDS-206ENST00000530075 TRAPPC3LQ5T215 181 aa9□□□□□ -0.97
GMDS-206ENST00000530075 TXNDC11Q6PKC3 985 aa9□□□□□ -0.97
GMDS-206ENST00000530075 PODNQ7Z5L7 613 aa9□□□□□ -0.97
GMDS-206ENST00000530075 WFDC8Q8IUA0 241 aa9□□□□□ -0.97
GMDS-206ENST00000530075 GIPC2Q8TF65 315 aa9□□□□□ -0.97
GMDS-206ENST00000530075 FAM161BQ96MY7 647 aa9□□□□□ -0.97
GMDS-206ENST00000530075 MUC3BQ9H195 1237 aa9□□□□□ -0.97
GMDS-206ENST00000530075 ABCB6Q9NP58 842 aa9□□□□□ -0.97
GMDS-206ENST00000530075 SOX13Q9UN79 622 aa9□□□□□ -0.97
GMDS-206ENST00000530075 A0A096LPE4 126 aa8.99□□□□□ -0.97
GMDS-206ENST00000530075 A0A1W2PPZ6 126 aa8.99□□□□□ -0.97
GMDS-206ENST00000530075 FAM229AH3BQW9 127 aa8.99□□□□□ -0.97
GMDS-206ENST00000530075 CDC27P30260 824 aa8.99□□□□□ -0.97
GMDS-206ENST00000530075 VN1R5Q7Z5H4 357 aa8.99□□□□□ -0.97
GMDS-206ENST00000530075 SCARF2Q96GP6 870 aaPredicted RBP8.99□□□□□ -0.97
GMDS-206ENST00000530075 PARP2Q9UGN5 583 aa8.99□□□□□ -0.97
GMDS-206ENST00000530075 LINC01387J3KSC0 135 aa8.98□□□□□ -0.97
GMDS-206ENST00000530075 HGSNATQ68CP4 663 aa8.98□□□□□ -0.97
GMDS-206ENST00000530075 PRPF40BQ6NWY9 871 aaKnown RBP8.98□□□□□ -0.97
GMDS-206ENST00000530075 BSNDQ8WZ55 320 aa8.98□□□□□ -0.97
GMDS-206ENST00000530075 PPME1Q9Y570 386 aa8.98□□□□□ -0.97
GMDS-206ENST00000530075 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
GMDS-206ENST00000530075 DEAF1O75398 565 aaPredicted RBP8.97□□□□□ -0.97
GMDS-206ENST00000530075 ZNF16P17020 682 aaPredicted RBP8.97□□□□□ -0.97
GMDS-206ENST00000530075 GNA15P30679 374 aa8.97□□□□□ -0.97
GMDS-206ENST00000530075 A0A0A0MRY4 1105 aa8.96□□□□□ -0.98
GMDS-206ENST00000530075 FCGRTP55899 365 aa8.96□□□□□ -0.98
GMDS-206ENST00000530075 TRAK1Q9UPV9 953 aa8.96□□□□□ -0.98
GMDS-206ENST00000530075 TM4SF5O14894 197 aa8.95□□□□□ -0.98
GMDS-206ENST00000530075 ITPKAP23677 461 aa8.95□□□□□ -0.98
GMDS-206ENST00000530075 SETDB1Q15047 1291 aa8.95□□□□□ -0.98
GMDS-206ENST00000530075 CACTIN-AS1Q8N1I8 211 aa8.95□□□□□ -0.98
GMDS-206ENST00000530075 SPG7Q9UQ90 795 aa8.95□□□□□ -0.98
GMDS-206ENST00000530075 SOX1O00570 391 aaPredicted RBP8.94□□□□□ -0.98
GMDS-206ENST00000530075 GSK3AP49840 483 aa8.94□□□□□ -0.98
GMDS-206ENST00000530075 DAB2P98082 770 aa8.94□□□□□ -0.98
GMDS-206ENST00000530075 ZNF423Q2M1K9 1284 aa8.94□□□□□ -0.98
GMDS-206ENST00000530075 GALNT11Q8NCW6 608 aa8.94□□□□□ -0.98
GMDS-206ENST00000530075 CARD10Q9BWT7 1032 aa8.94□□□□□ -0.98
GMDS-206ENST00000530075 C12orf49Q9H741 205 aa8.94□□□□□ -0.98
GMDS-206ENST00000530075 RBM47A0AV96 593 aaKnown RBP8.93□□□□□ -0.98
GMDS-206ENST00000530075 TMC4Q7Z404 712 aa8.93□□□□□ -0.98
GMDS-206ENST00000530075 FMR1NBQ8N0W7 255 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms