RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
COPB1-207ENST00000529866 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
COPB1-207ENST00000529866 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
COPB1-207ENST00000529866 MKI67P46013 3256 aaKnown RBP13.5□□□□□ -0.25
COPB1-207ENST00000529866 SASH1O94885 1247 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 PRKG1Q13976 671 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 DACT2Q5SW24 774 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 ERO1AQ96HE7 468 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 MYD88Q99836 296 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
COPB1-207ENST00000529866 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
COPB1-207ENST00000529866 ANGEL1Q9UNK9 670 aaKnown RBP13.49□□□□□ -0.25
COPB1-207ENST00000529866 HTTP42858 3142 aa13.48□□□□□ -0.25
COPB1-207ENST00000529866 ZBTB48P10074 688 aaPredicted RBP13.48□□□□□ -0.25
COPB1-207ENST00000529866 LDLRAD1Q5T700 205 aa13.48□□□□□ -0.25
COPB1-207ENST00000529866 OTOP1Q7RTM1 612 aa13.48□□□□□ -0.25
COPB1-207ENST00000529866 R3HDMLQ9H3Y0 253 aa13.48□□□□□ -0.25
COPB1-207ENST00000529866 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
COPB1-207ENST00000529866 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
COPB1-207ENST00000529866 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
COPB1-207ENST00000529866 OTUD7BQ6GQQ9 843 aa13.47□□□□□ -0.25
COPB1-207ENST00000529866 IFNL1Q8IU54 200 aa13.47□□□□□ -0.25
COPB1-207ENST00000529866 SLC10A4Q96EP9 437 aa13.47□□□□□ -0.25
COPB1-207ENST00000529866 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
COPB1-207ENST00000529866 KIAA0100Q14667 2235 aaKnown RBP13.46□□□□□ -0.25
COPB1-207ENST00000529866 PPP1R12BO60237 982 aaPredicted RBP13.46□□□□□ -0.25
COPB1-207ENST00000529866 CCT4P50991 539 aaKnown RBP13.46□□□□□ -0.25
COPB1-207ENST00000529866 CTSWP56202 376 aa13.46□□□□□ -0.25
COPB1-207ENST00000529866 CCDC146Q8IYE0 955 aa13.46□□□□□ -0.25
COPB1-207ENST00000529866 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
COPB1-207ENST00000529866 CHMP4AQ9BY43 222 aa13.46□□□□□ -0.25
COPB1-207ENST00000529866 UNCXA6NJT0 531 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 RALBP1Q15311 655 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 TTLL5Q6EMB2 1281 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 KIAA0825Q8IV33 1275 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 MINPP1Q9UNW1 487 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 LEMD3Q9Y2U8 911 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 PPP2R3BQ9Y5P8 575 aa13.45□□□□□ -0.26
COPB1-207ENST00000529866 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
COPB1-207ENST00000529866 FXR1P51114 621 aaKnown RBP eCLIP13.44□□□□□ -0.261e-7■■■■■ 39.9
COPB1-207ENST00000529866 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
COPB1-207ENST00000529866 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
COPB1-207ENST00000529866 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
COPB1-207ENST00000529866 WNK4Q96J92 1243 aa13.44□□□□□ -0.26
COPB1-207ENST00000529866 METTL22Q9BUU2 404 aaPredicted RBP13.44□□□□□ -0.26
COPB1-207ENST00000529866 TMEM106CQ9BVX2 250 aa13.44□□□□□ -0.26
COPB1-207ENST00000529866 PHAXQ9H814 394 aaKnown RBP13.44□□□□□ -0.26
COPB1-207ENST00000529866 EFCC1Q9HA90 598 aa13.44□□□□□ -0.26
COPB1-207ENST00000529866 MBIPQ9NS73 344 aa13.44□□□□□ -0.26
COPB1-207ENST00000529866 PTPN22Q9Y2R2 807 aa13.44□□□□□ -0.26
COPB1-207ENST00000529866 IGF2BP3O00425 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
COPB1-207ENST00000529866 MYO1BO43795 1136 aa13.43□□□□□ -0.26
COPB1-207ENST00000529866 ARHGEF6Q15052 776 aa13.43□□□□□ -0.26
COPB1-207ENST00000529866 DLGAP5Q15398 846 aa13.43□□□□□ -0.26
COPB1-207ENST00000529866 SUPT20HL1Q3ZLR7 823 aa13.43□□□□□ -0.26
COPB1-207ENST00000529866 GREM2Q9H772 168 aa13.43□□□□□ -0.26
COPB1-207ENST00000529866 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
COPB1-207ENST00000529866 PSME4Q14997 1843 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 KCNJ4P48050 445 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 IREB2P48200 963 aaKnown RBP13.42□□□□□ -0.26
COPB1-207ENST00000529866 CALD1Q05682 793 aaKnown RBP13.42□□□□□ -0.26
COPB1-207ENST00000529866 CRHR2Q13324 411 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 TTLL11Q8NHH1 800 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 CD99L2Q8TCZ2 262 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 ZBED3Q96IU2 234 aaPredicted RBP13.42□□□□□ -0.26
COPB1-207ENST00000529866 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 CEP290O15078 2479 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 BRCA2P51587 3418 aa13.42□□□□□ -0.26
COPB1-207ENST00000529866 CENPFP49454 3210 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 ZNF804BA4D1E1 1349 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 WTIPA6NIX2 430 aaPredicted RBP13.41□□□□□ -0.26
COPB1-207ENST00000529866 EN2P19622 333 aaPredicted RBP13.41□□□□□ -0.26
COPB1-207ENST00000529866 GTF2IP78347 998 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 SP3Q02447 781 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 CLMNQ96JQ2 1002 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 FZD1Q9UP38 647 aa13.41□□□□□ -0.26
COPB1-207ENST00000529866 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.26
COPB1-207ENST00000529866 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
COPB1-207ENST00000529866 NBPF11Q86T75 865 aa13.4□□□□□ -0.26
COPB1-207ENST00000529866 TXNRD3Q86VQ6 643 aa13.4□□□□□ -0.26
COPB1-207ENST00000529866 ZNF333Q96JL9 665 aa13.4□□□□□ -0.26
COPB1-207ENST00000529866 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
COPB1-207ENST00000529866 MAP3K2Q9Y2U5 619 aa13.4□□□□□ -0.26
COPB1-207ENST00000529866 ELL2O00472 640 aaPredicted RBP13.39□□□□□ -0.27
COPB1-207ENST00000529866 GNAI1P63096 354 aa13.39□□□□□ -0.27
COPB1-207ENST00000529866 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
COPB1-207ENST00000529866 SLC4A8Q2Y0W8 1093 aa13.39□□□□□ -0.27
COPB1-207ENST00000529866 SLC9C1Q4G0N8 1177 aa13.39□□□□□ -0.27
COPB1-207ENST00000529866 ANKRD13AQ8IZ07 590 aa13.39□□□□□ -0.27
COPB1-207ENST00000529866 MTMR14Q8NCE2 650 aa13.39□□□□□ -0.27
COPB1-207ENST00000529866 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
COPB1-207ENST00000529866 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 227.3 ms