RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 C8orf37Q96NL8 207 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 VAMP4O75379 141 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 SYT1P21579 422 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 CCDC171Q6TFL3 1326 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 ABCC1P33527 1531 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 ATP2C2O75185 946 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 XRCC6P12956 609 aaKnown RBP eCLIP9.26□□□□□ -0.932e-8■□□□□ 8.5
CTNND1-220ENST00000529526 CPA1P15085 419 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 LMOD1P29536 600 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 NOLC1Q14978 699 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 ZNF804AQ7Z570 1209 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 SMARCC2Q8TAQ2 1214 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 FAM200AQ8TCP9 573 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 SPAG5Q96R06 1193 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 CTAGE1Q96RT6 745 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 MRVI1Q9Y6F6 885 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 IRS4O14654 1257 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 SPTLC2O15270 562 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 HSF2BPO75031 334 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 CCDC175P0C221 793 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 GJC1P36383 396 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 V9GYY5 206 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 PARD3Q8TEW0 1356 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 MAP3K5Q99683 1374 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 SEC24BO95487 1268 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 KRT2P35908 639 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 MICALCLQ6ZW33 695 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 COMMD10Q9Y6G5 202 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 UGGT2Q9NYU1 1516 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 RUFY3Q7L099 469 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 SYNCQ9H7C4 482 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 TTC12Q9H892 705 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-220ENST00000529526 MCM9Q9NXL9 1143 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 PTPDC1A2A3K4 754 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 PLEKHM2Q8IWE5 1019 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 SNX21Q969T3 373 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 ITSN2Q9NZM3 1697 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 CAVIN2O95810 425 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 TYRO3Q06418 890 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 PLS1Q14651 629 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 KIAA0753Q2KHM9 967 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 VEZTQ9HBM0 779 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 TTC41PQ6P2S7 1318 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 NF2P35240 595 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 CYLC1P35663 651 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-220ENST00000529526 CCDC129Q6ZRS4 1044 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 EHBP1Q8NDI1 1231 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 CAPZA3Q96KX2 299 aa9.25□□□□□ -0.93
CTNND1-220ENST00000529526 ZHX1Q9UKY1 873 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-220ENST00000529526 UHRF1BP1LA0JNW5 1464 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 FSD2A1L4K1 749 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 PHACTR2O75167 634 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 IL2RBP14784 551 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 IFI16Q16666 785 aaKnown RBP9.24□□□□□ -0.93
CTNND1-220ENST00000529526 AKNAD1Q5T1N1 836 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 DCTPP1Q9H773 170 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 HOMER2Q9NSB8 354 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 ZBTB21Q9ULJ3 1066 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 BMP15O95972 392 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 KRT13P13646 458 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 TNNI2P48788 182 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 DDB1Q16531 1140 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 CEP112Q8N8E3 955 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 RRP36Q96EU6 259 aaKnown RBP9.24□□□□□ -0.93
CTNND1-220ENST00000529526 EYA1Q99502 592 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 BIVM-ERCC5R4GMW8 1640 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 TRIM75PA6NK02 468 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 STAMBPO95630 424 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 BMS1Q14692 1282 aaKnown RBP9.24□□□□□ -0.93
CTNND1-220ENST00000529526 KARSQ15046 597 aaKnown RBP9.24□□□□□ -0.93
CTNND1-220ENST00000529526 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
CTNND1-220ENST00000529526 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 RTL9Q8NET4 1388 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 CTAGE15A4D2H0 777 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 PSMA7O14818 248 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 CTAGE8P0CG41 777 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 DPH6Q7L8W6 267 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 CTAGE6Q86UF2 777 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 CTAGE4Q8IX94 777 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 PAIP2Q9BPZ3 127 aaKnown RBP9.24□□□□□ -0.93
CTNND1-220ENST00000529526 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-220ENST00000529526 FLT4P35916 1363 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 A2MP01023 1474 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 NPHP3Q7Z494 1330 aa9.24□□□□□ -0.93
CTNND1-220ENST00000529526 CHMLP26374 656 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 UBXN1Q04323 297 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 LINS1Q8NG48 757 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 C6orf50Q9HD87 102 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 SAP30BPQ9UHR5 308 aaKnown RBP9.23□□□□□ -0.93
CTNND1-220ENST00000529526 DYNC1I1O14576 645 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 CKAP4Q07065 602 aaKnown RBP9.23□□□□□ -0.93
CTNND1-220ENST00000529526 G2E3Q7L622 706 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 HDAC9Q9UKV0 1011 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 A0A1W2PP64 1363 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 ATP10BO94823 1461 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms