RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 LBX1P52954 281 aa16.5■□□□□ 0.23
SSH3-206ENST00000529224 CHRNDQ07001 517 aa16.5■□□□□ 0.23
SSH3-206ENST00000529224 TAF7LQ5H9L4 462 aa16.5■□□□□ 0.23
SSH3-206ENST00000529224 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
SSH3-206ENST00000529224 SAMD7Q7Z3H4 446 aa16.5■□□□□ 0.23
SSH3-206ENST00000529224 ZC3H15Q8WU90 426 aaKnown RBP16.5■□□□□ 0.23
SSH3-206ENST00000529224 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
SSH3-206ENST00000529224 TLL2Q9Y6L7 1015 aa16.5■□□□□ 0.23
SSH3-206ENST00000529224 ZNF609O15014 1411 aa16.5■□□□□ 0.23
SSH3-206ENST00000529224 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
SSH3-206ENST00000529224 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
SSH3-206ENST00000529224 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
SSH3-206ENST00000529224 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
SSH3-206ENST00000529224 GRM1Q13255 1194 aa16.49■□□□□ 0.23
SSH3-206ENST00000529224 CYP4F22Q6NT55 531 aa16.49■□□□□ 0.23
SSH3-206ENST00000529224 DLK2Q6UY11 383 aa16.49■□□□□ 0.23
SSH3-206ENST00000529224 CAPNS2Q96L46 248 aa16.49■□□□□ 0.23
SSH3-206ENST00000529224 USP17L3A6NCW0 530 aa16.48■□□□□ 0.23
SSH3-206ENST00000529224 USP17L4A6NCW7 530 aa16.48■□□□□ 0.23
SSH3-206ENST00000529224 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
SSH3-206ENST00000529224 TBC1D10BQ4KMP7 808 aaPredicted RBP16.48■□□□□ 0.23
SSH3-206ENST00000529224 RSBN1LQ6PCB5 846 aaPredicted RBP16.48■□□□□ 0.23
SSH3-206ENST00000529224 USP17L1Q7RTZ2 530 aa16.48■□□□□ 0.23
SSH3-206ENST00000529224 AGBL3Q8NEM8 1001 aa16.48■□□□□ 0.23
SSH3-206ENST00000529224 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
SSH3-206ENST00000529224 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
SSH3-206ENST00000529224 SAPCD2Q86UD0 394 aa16.47■□□□□ 0.23
SSH3-206ENST00000529224 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
SSH3-206ENST00000529224 CNNM1Q9NRU3 951 aa16.47■□□□□ 0.23
SSH3-206ENST00000529224 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
SSH3-206ENST00000529224 MAP2K1Q02750 393 aaPredicted RBP16.46■□□□□ 0.23
SSH3-206ENST00000529224 CDC37L1Q7L3B6 337 aa16.46■□□□□ 0.23
SSH3-206ENST00000529224 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
SSH3-206ENST00000529224 ZNF594Q96JF6 807 aaPredicted RBP16.46■□□□□ 0.23
SSH3-206ENST00000529224 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
SSH3-206ENST00000529224 USP44Q9H0E7 712 aa16.46■□□□□ 0.23
SSH3-206ENST00000529224 BICC1Q9H694 974 aaKnown RBP16.46■□□□□ 0.23
SSH3-206ENST00000529224 ZNF408Q9H9D4 720 aa16.46■□□□□ 0.23
SSH3-206ENST00000529224 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
SSH3-206ENST00000529224 AOC2O75106 756 aa16.45■□□□□ 0.22
SSH3-206ENST00000529224 HSPA8P11142 646 aaKnown RBP16.45■□□□□ 0.22
SSH3-206ENST00000529224 HNRNPUQ00839 825 aaKnown RBP eCLIP16.45■□□□□ 0.22
SSH3-206ENST00000529224 KIF4BQ2VIQ3 1234 aa16.45■□□□□ 0.22
SSH3-206ENST00000529224 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
SSH3-206ENST00000529224 RBM26Q5T8P6 1007 aaKnown RBP16.45■□□□□ 0.22
SSH3-206ENST00000529224 TXNRD3Q86VQ6 643 aa16.45■□□□□ 0.22
SSH3-206ENST00000529224 HELBQ8NG08 1087 aaPredicted RBP16.45■□□□□ 0.22
SSH3-206ENST00000529224 GMLQ99445 158 aa16.45■□□□□ 0.22
SSH3-206ENST00000529224 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
SSH3-206ENST00000529224 TAF5LO75529 589 aa16.44■□□□□ 0.22
SSH3-206ENST00000529224 KLRK1P26718 216 aa16.44■□□□□ 0.22
SSH3-206ENST00000529224 ECE1P42892 770 aa16.44■□□□□ 0.22
SSH3-206ENST00000529224 ZNF280AP59817 542 aaPredicted RBP16.44■□□□□ 0.22
SSH3-206ENST00000529224 STRIP1Q5VSL9 837 aa16.44■□□□□ 0.22
SSH3-206ENST00000529224 C15orf52Q6ZUT6 534 aaKnown RBP16.44■□□□□ 0.22
SSH3-206ENST00000529224 ASTN2O75129 1339 aaPredicted RBP16.44■□□□□ 0.22
SSH3-206ENST00000529224 MYO3BQ8WXR4 1341 aa16.44■□□□□ 0.22
SSH3-206ENST00000529224 PLIN1O60240 522 aa16.43■□□□□ 0.22
SSH3-206ENST00000529224 USP17L8P0C7I0 530 aa16.43■□□□□ 0.22
SSH3-206ENST00000529224 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
SSH3-206ENST00000529224 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
SSH3-206ENST00000529224 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
SSH3-206ENST00000529224 BEGAINQ9BUH8 593 aa16.43■□□□□ 0.22
SSH3-206ENST00000529224 ADM5C9JUS6 153 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 SNAP23O00161 211 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 TTLL5Q6EMB2 1281 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 KRT26Q7Z3Y9 468 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 ZNF804AQ7Z570 1209 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 ARHGAP45Q92619 1136 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 CD209Q9NNX6 404 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 MYH13Q9UKX3 1938 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
SSH3-206ENST00000529224 MMP14P50281 582 aa16.41■□□□□ 0.22
SSH3-206ENST00000529224 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
SSH3-206ENST00000529224 DCPSQ96C86 337 aaKnown RBP16.41■□□□□ 0.22
SSH3-206ENST00000529224 HHIPL1Q96JK4 782 aa16.41■□□□□ 0.22
SSH3-206ENST00000529224 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
SSH3-206ENST00000529224 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
SSH3-206ENST00000529224 MROH5Q6ZUA9 1318 aa16.41■□□□□ 0.22
SSH3-206ENST00000529224 IPO8O15397 1037 aaKnown RBP16.4■□□□□ 0.22
SSH3-206ENST00000529224 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
SSH3-206ENST00000529224 MAP2K2P36507 400 aa16.4■□□□□ 0.22
SSH3-206ENST00000529224 GTF2IP78347 998 aa16.4■□□□□ 0.22
SSH3-206ENST00000529224 OGFOD1Q8N543 542 aa16.4■□□□□ 0.22
SSH3-206ENST00000529224 PUS3Q9BZE2 481 aaKnown RBP16.4■□□□□ 0.22
SSH3-206ENST00000529224 MYOZ2Q9NPC6 264 aa16.4■□□□□ 0.22
SSH3-206ENST00000529224 GGA3Q9NZ52 723 aa16.4■□□□□ 0.22
SSH3-206ENST00000529224 SULF1Q8IWU6 871 aa16.39■□□□□ 0.21
SSH3-206ENST00000529224 MXD3Q9BW11 206 aa16.39■□□□□ 0.21
SSH3-206ENST00000529224 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
SSH3-206ENST00000529224 IL1R1P14778 569 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 HUNKP57058 714 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 SCARF1Q14162 830 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 HDAC9Q9UKV0 1011 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
SSH3-206ENST00000529224 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms