RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
SSBP3-212ENST00000528930 MYBBP1AQ9BQG0 1328 aaKnown RBP11.2□□□□□ -0.62
SSBP3-212ENST00000528930 NPHP1O15259 732 aa11.2□□□□□ -0.62
SSBP3-212ENST00000528930 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
SSBP3-212ENST00000528930 ALDH1B1P30837 517 aa11.2□□□□□ -0.62
SSBP3-212ENST00000528930 FOSBP53539 338 aa11.2□□□□□ -0.62
SSBP3-212ENST00000528930 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
SSBP3-212ENST00000528930 VSIG10Q8N0Z9 540 aa11.2□□□□□ -0.62
SSBP3-212ENST00000528930 SNX27Q96L92 541 aa11.2□□□□□ -0.62
SSBP3-212ENST00000528930 RIC1Q4ADV7 1423 aa11.19□□□□□ -0.62
SSBP3-212ENST00000528930 DDX60Q8IY21 1712 aaKnown RBP11.19□□□□□ -0.62
SSBP3-212ENST00000528930 SHTN1A0MZ66 631 aa11.19□□□□□ -0.62
SSBP3-212ENST00000528930 BHMG1C9JSJ3 638 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-212ENST00000528930 PTPREP23469 700 aa11.19□□□□□ -0.62
SSBP3-212ENST00000528930 TEFQ10587 303 aa11.19□□□□□ -0.62
SSBP3-212ENST00000528930 THSD4Q6ZMP0 1018 aa11.19□□□□□ -0.62
SSBP3-212ENST00000528930 Q7L0L9 218 aa11.19□□□□□ -0.62
SSBP3-212ENST00000528930 PRKRIP1Q9H875 184 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-212ENST00000528930 CACNA1AO00555 2505 aa11.19□□□□□ -0.62
SSBP3-212ENST00000528930 GOLGA8CPA6NN73 597 aa11.18□□□□□ -0.62
SSBP3-212ENST00000528930 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
SSBP3-212ENST00000528930 CAMTA2O94983 1202 aa11.18□□□□□ -0.62
SSBP3-212ENST00000528930 MCM10Q7L590 875 aa11.18□□□□□ -0.62
SSBP3-212ENST00000528930 WNT2BQ93097 391 aa11.18□□□□□ -0.62
SSBP3-212ENST00000528930 ZNRF3Q9ULT6 936 aa11.18□□□□□ -0.62
SSBP3-212ENST00000528930 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 FKBP1BP68106 108 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 DCTN1Q14203 1278 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 ZNF790Q6PG37 636 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 SLC4A5Q9BY07 1137 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 VPS33BQ9H267 617 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 CNOT7Q9UIV1 285 aaKnown RBP11.17□□□□□ -0.62
SSBP3-212ENST00000528930 TBC1D2BQ9UPU7 963 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 DLG5Q8TDM6 1919 aa11.17□□□□□ -0.62
SSBP3-212ENST00000528930 SSC5DA1L4H1 1573 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 BTBD11A6QL63 1104 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-212ENST00000528930 KCNQ3O43525 872 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 NFE2L2Q16236 605 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 AOC3Q16853 763 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 CRY2Q49AN0 593 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 NBPF5PQ86XG9 351 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-212ENST00000528930 TTC5Q8N0Z6 440 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
SSBP3-212ENST00000528930 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-212ENST00000528930 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
SSBP3-212ENST00000528930 H7C1D1 291 aa11.15□□□□□ -0.62
SSBP3-212ENST00000528930 EVI5O60447 810 aa11.15□□□□□ -0.62
SSBP3-212ENST00000528930 SLC51AQ86UW1 340 aa11.15□□□□□ -0.62
SSBP3-212ENST00000528930 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
SSBP3-212ENST00000528930 DPF3Q92784 378 aa11.15□□□□□ -0.62
SSBP3-212ENST00000528930 CDCA5Q96FF9 252 aa11.15□□□□□ -0.62
SSBP3-212ENST00000528930 PNNQ9H307 717 aaKnown RBP11.15□□□□□ -0.62
SSBP3-212ENST00000528930 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
SSBP3-212ENST00000528930 EGFRP00533 1210 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 NEFMP07197 916 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 IL6STP40189 918 aaPredicted RBP11.14□□□□□ -0.63
SSBP3-212ENST00000528930 SREBF2Q12772 1141 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 UBE2Q1Q7Z7E8 422 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 DCPSQ96C86 337 aaKnown RBP11.14□□□□□ -0.63
SSBP3-212ENST00000528930 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 ERO1AQ96HE7 468 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 PSME4Q14997 1843 aa11.14□□□□□ -0.63
SSBP3-212ENST00000528930 RPTORQ8N122 1335 aa11.13□□□□□ -0.63
SSBP3-212ENST00000528930 EYSQ5T1H1 3165 aa11.13□□□□□ -0.63
SSBP3-212ENST00000528930 WTIPA6NIX2 430 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-212ENST00000528930 CAP1Q01518 475 aa11.13□□□□□ -0.63
SSBP3-212ENST00000528930 TNIP1Q15025 636 aa11.13□□□□□ -0.63
SSBP3-212ENST00000528930 TAF7Q15545 349 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-212ENST00000528930 DPF2Q92785 391 aa11.13□□□□□ -0.63
SSBP3-212ENST00000528930 FMNL2Q96PY5 1086 aa11.13□□□□□ -0.63
SSBP3-212ENST00000528930 ZSWIM8A7E2V4 1837 aa11.13□□□□□ -0.63
SSBP3-212ENST00000528930 PIEZO1Q92508 2521 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 MAPK8IP3Q9UPT6 1336 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 NUP98P52948 1817 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 STARD3NLO95772 234 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 ALDH1A1P00352 501 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 HOXA10P31260 410 aaPredicted RBP11.12□□□□□ -0.63
SSBP3-212ENST00000528930 SLC4A8Q2Y0W8 1093 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 TEX13AQ9BXU3 409 aaPredicted RBP11.12□□□□□ -0.63
SSBP3-212ENST00000528930 MIS18AQ9NYP9 233 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 NR2E3Q9Y5X4 410 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 LRRC37AA6NMS7 1700 aa11.12□□□□□ -0.63
SSBP3-212ENST00000528930 LAMB2P55268 1798 aa11.11□□□□□ -0.63
SSBP3-212ENST00000528930 SCN9AQ15858 1988 aa11.11□□□□□ -0.63
SSBP3-212ENST00000528930 PRAMEF22A3QJZ6 481 aa11.11□□□□□ -0.63
SSBP3-212ENST00000528930 RAD17O75943 681 aa11.11□□□□□ -0.63
SSBP3-212ENST00000528930 PDE4AP27815 886 aa11.11□□□□□ -0.63
SSBP3-212ENST00000528930 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
SSBP3-212ENST00000528930 LRIT3Q3SXY7 679 aa11.11□□□□□ -0.63
SSBP3-212ENST00000528930 TBC1D10BQ4KMP7 808 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-212ENST00000528930 CLEC4GQ6UXB4 293 aa11.11□□□□□ -0.63
SSBP3-212ENST00000528930 TPTE2Q6XPS3 522 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms