RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	FZD9	O00144	591 aa		9.69	□□□□□ -0.86
MS4A6A-208	ENST00000528851	GNAI2	P04899	355 aa		9.69	□□□□□ -0.86
MS4A6A-208	ENST00000528851	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.69	□□□□□ -0.86
MS4A6A-208	ENST00000528851	POLL	Q9UGP5	575 aa		9.69	□□□□□ -0.86
MS4A6A-208	ENST00000528851	GGA1	Q9UJY5	639 aa		9.69	□□□□□ -0.86
MS4A6A-208	ENST00000528851	PPIP5K2	O43314	1243 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	IFNL1	Q8IU54	200 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	ZNRF3	Q9ULT6	936 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	LRRFIP2	Q9Y608	721 aa	Known RBP	9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	KDM2B	Q8NHM5	1336 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	RLBP1	P12271	317 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	RFX5	P48382	616 aa	Predicted RBP	9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	EIF6	P56537	245 aa	Known RBP	9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	CHRND	Q07001	517 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	MTX1	Q13505	466 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	AOC3	Q16853	763 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	ITPRIP	Q8IWB1	547 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	NIM1K	Q8IY84	436 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	ZNF594	Q96JF6	807 aa	Predicted RBP	9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	CNNM1	Q9NRU3	951 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	DDX19B	Q9UMR2	479 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	RIPOR2	Q9Y4F9	1068 aa		9.68	□□□□□ -0.86
MS4A6A-208	ENST00000528851	ATP8B2	P98198	1209 aa		9.67	□□□□□ -0.86
MS4A6A-208	ENST00000528851	PTPN12	Q05209	780 aa	Known RBP	9.67	□□□□□ -0.86
MS4A6A-208	ENST00000528851	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.67	□□□□□ -0.86
MS4A6A-208	ENST00000528851	MROH5	Q6ZUA9	1318 aa		9.67	□□□□□ -0.86
MS4A6A-208	ENST00000528851	LAMB2	P55268	1798 aa		9.67	□□□□□ -0.86
MS4A6A-208	ENST00000528851	FER1L6	Q2WGJ9	1857 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	PLIN1	O60240	522 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	UFL1	O94874	794 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	MVP	Q14764	893 aa	Known RBP	9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	C15orf52	Q6ZUT6	534 aa	Known RBP	9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	SLC51A	Q86UW1	340 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	PANK1	Q8TE04	598 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	COPRS	Q9NQ92	184 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	ZNF804B	A4D1E1	1349 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	CHD4	Q14839	1912 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851		G3V3G9	751 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	EYA2	O00167	538 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	RIMBP2	O15034	1052 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	CIAO1	O76071	339 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	UBE4A	Q14139	1066 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	TNIP1	Q15025	636 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	DCAF8	Q5TAQ9	597 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	PODN	Q7Z5L7	613 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	GPC2	Q8N158	579 aa		9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	PUS3	Q9BZE2	481 aa	Known RBP	9.66	□□□□□ -0.86
MS4A6A-208	ENST00000528851	DDN	O94850	711 aa	Predicted RBP	9.65	□□□□□ -0.86
MS4A6A-208	ENST00000528851	PDE8B	O95263	885 aa		9.65	□□□□□ -0.86
MS4A6A-208	ENST00000528851	LRRC24	Q50LG9	513 aa		9.65	□□□□□ -0.86
MS4A6A-208	ENST00000528851	COA1	Q9GZY4	146 aa		9.65	□□□□□ -0.86
MS4A6A-208	ENST00000528851	RRAGC	Q9HB90	399 aa		9.65	□□□□□ -0.86
MS4A6A-208	ENST00000528851	COG6	Q9Y2V7	657 aa		9.65	□□□□□ -0.86
MS4A6A-208	ENST00000528851	SRGAP3	O43295	1099 aa		9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	TAF5L	O75529	589 aa		9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	VEGFA	P15692	232 aa	Predicted RBP	9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	IL15	P40933	162 aa	Predicted RBP	9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	KCNJ4	P48050	445 aa		9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	CXCL9	Q07325	125 aa		9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	CIAPIN1	Q6FI81	312 aa		9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	RPAP2	Q8IXW5	612 aa	Predicted RBP	9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	HELB	Q8NG08	1087 aa	Predicted RBP	9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	L3MBTL3	Q96JM7	780 aa	Predicted RBP	9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	MED23	Q9ULK4	1368 aa		9.64	□□□□□ -0.87
MS4A6A-208	ENST00000528851	NUBP1	P53384	320 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	DOK7	Q18PE1	504 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	SSH3	Q8TE77	659 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	FAM212A	Q96EL1	285 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	ZBTB40	Q9NUA8	1239 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	CEP126	Q9P2H0	1117 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	SBF1	O95248	1867 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	IQCA1L	A6NCM1	817 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	WTIP	A6NIX2	430 aa	Predicted RBP	9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	POTEC	B2RU33	542 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	ECE2	O60344	883 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	RRP1	P56182	461 aa	Known RBP	9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	METTL24	Q5JXM2	366 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	ATG9A	Q7Z3C6	839 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	PLCD3	Q8N3E9	789 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	KLHDC4	Q8TBB5	520 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	ZNF526	Q8TF50	670 aa	Predicted RBP	9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	DBNDD1	Q9H9R9	158 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	COL4A1	P02462	1669 aa		9.63	□□□□□ -0.87
MS4A6A-208	ENST00000528851	PNMA6E	A0A0J9YXQ4	647 aa		9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	YDJC	A8MPS7	323 aa		9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	KIF3C	O14782	793 aa		9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	VIL1	P09327	827 aa	Known RBP	9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	G3BP1	Q13283	466 aa	Known RBP eCLIP	9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	VGLL2	Q8N8G2	317 aa		9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	ZNF541	Q9H0D2	1346 aa		9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	NMRK2	Q9NPI5	230 aa		9.62	□□□□□ -0.87
MS4A6A-208	ENST00000528851	LRRC37A	A6NMS7	1700 aa		9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	IRS2	Q9Y4H2	1338 aa		9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	IFIT1	P09914	478 aa	Known RBP	9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	FGFR2	P21802	821 aa		9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	MMP14	P50281	582 aa		9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	C20orf194	Q5TEA3	1177 aa		9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	TXNRD3	Q86VQ6	643 aa		9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	DPF2	Q92785	391 aa		9.61	□□□□□ -0.87
MS4A6A-208	ENST00000528851	GPR101	Q96P66	508 aa	Predicted RBP	9.61	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms