RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PTCD1O75127 700 aaKnown RBP5.35□□□□□ -1.55
BRCA2-203ENST00000528762 ACPPP15309 386 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 LRP8Q14114 963 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 PRR23CQ6ZRP0 262 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 OR13H1Q8NG92 308 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 GTF3C2Q8WUA4 911 aaPredicted RBP5.35□□□□□ -1.55
BRCA2-203ENST00000528762 PIK3R5Q8WYR1 880 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 RASSF4Q9H2L5 321 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 ANO2Q9NQ90 1003 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 SH2B1Q9NRF2 756 aaPredicted RBP5.35□□□□□ -1.55
BRCA2-203ENST00000528762 KCNK4Q9NYG8 393 aa5.35□□□□□ -1.55
BRCA2-203ENST00000528762 A6NHS1 94 aa5.34□□□□□ -1.55
BRCA2-203ENST00000528762 DDX3YO15523 660 aaKnown RBP5.34□□□□□ -1.55
BRCA2-203ENST00000528762 SOX18P35713 384 aa5.34□□□□□ -1.55
BRCA2-203ENST00000528762 TTC39BQ5VTQ0 682 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-203ENST00000528762 GLYCTKQ8IVS8 523 aa5.34□□□□□ -1.55
BRCA2-203ENST00000528762 MRPL18Q9H0U6 180 aaKnown RBP5.34□□□□□ -1.55
BRCA2-203ENST00000528762 C11orf16Q9NQ32 467 aa5.34□□□□□ -1.55
BRCA2-203ENST00000528762 TMEM63CQ9P1W3 806 aa5.34□□□□□ -1.55
BRCA2-203ENST00000528762 KIAA1522Q9P206 1035 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-203ENST00000528762 PPME1Q9Y570 386 aa5.34□□□□□ -1.55
BRCA2-203ENST00000528762 ANKRD33BA6NCL7 494 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-203ENST00000528762 TRPA1O75762 1119 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 SSTR4P31391 388 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 HYAL2Q12891 473 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 ZNF211Q13398 564 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-203ENST00000528762 SF3B2Q13435 895 aaKnown RBP5.33□□□□□ -1.56
BRCA2-203ENST00000528762 ECM1Q16610 540 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 ACAD11Q709F0 780 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 COL26A1Q96A83 441 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 NUDT16Q96DE0 195 aaKnown RBP5.33□□□□□ -1.56
BRCA2-203ENST00000528762 STIM2Q9P246 746 aa5.33□□□□□ -1.56
BRCA2-203ENST00000528762 H3BRB1 525 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 HOXD8P13378 290 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-203ENST00000528762 FSTP19883 344 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 CDC27P30260 824 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 NCAPG2Q86XI2 1143 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 DZIP1LQ8IYY4 767 aaKnown RBP5.32□□□□□ -1.56
BRCA2-203ENST00000528762 UBASH3BQ8TF42 649 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 SPACA7Q96KW9 195 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 UBL7Q96S82 380 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-203ENST00000528762 BCL2L13Q9BXK5 485 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 TUT1Q9H6E5 874 aaKnown RBP5.32□□□□□ -1.56
BRCA2-203ENST00000528762 ABI2Q9NYB9 513 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-203ENST00000528762 CNTN3Q9P232 1028 aa5.32□□□□□ -1.56
BRCA2-203ENST00000528762 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 LOC105371045A0A1W2PR82 267 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 SMNDC1O75940 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
BRCA2-203ENST00000528762 EPHA1P21709 976 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 DNM1Q05193 864 aaKnown RBP5.31□□□□□ -1.56
BRCA2-203ENST00000528762 MTMR3Q13615 1198 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 ZNF326Q5BKZ1 582 aaKnown RBP5.31□□□□□ -1.56
BRCA2-203ENST00000528762 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.31□□□□□ -1.56
BRCA2-203ENST00000528762 ZNF438Q7Z4V0 828 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 NPAS4Q8IUM7 802 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 EDEM1Q92611 657 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 HHIPQ96QV1 700 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 ELP3Q9H9T3 547 aa5.31□□□□□ -1.56
BRCA2-203ENST00000528762 ADAM11O75078 769 aa5.3□□□□□ -1.56
BRCA2-203ENST00000528762 FAM13AO94988 1023 aa5.3□□□□□ -1.56
BRCA2-203ENST00000528762 ZNF16P17020 682 aaPredicted RBP5.3□□□□□ -1.56
BRCA2-203ENST00000528762 MAPK1P28482 360 aa5.3□□□□□ -1.56
BRCA2-203ENST00000528762 CD68P34810 354 aaPredicted RBP5.3□□□□□ -1.56
BRCA2-203ENST00000528762 ZSCAN29Q8IWY8 852 aaPredicted RBP5.3□□□□□ -1.56
BRCA2-203ENST00000528762 C1orf127Q8N9H9 656 aa5.3□□□□□ -1.56
BRCA2-203ENST00000528762 MRRFQ96E11 262 aaKnown RBP5.3□□□□□ -1.56
BRCA2-203ENST00000528762 POP1Q99575 1024 aaKnown RBP5.3□□□□□ -1.56
BRCA2-203ENST00000528762 PBX4Q9BYU1 374 aa5.3□□□□□ -1.56
BRCA2-203ENST00000528762 FAM13BQ9NYF5 915 aa5.3□□□□□ -1.56
BRCA2-203ENST00000528762 DCTN4Q9UJW0 460 aa5.3□□□□□ -1.56
BRCA2-203ENST00000528762 FNDC3AQ9Y2H6 1198 aaKnown RBP5.3□□□□□ -1.56
BRCA2-203ENST00000528762 FSCN2O14926 492 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 NLRP12P59046 1061 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 C8orf34Q49A92 452 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 HGSNATQ68CP4 663 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 ARMC10Q8N2F6 343 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 TMEM130Q8N3G9 435 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 ABTB2Q8N961 1025 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 HELQQ8TDG4 1101 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 KLHDC7BQ96G42 594 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 GGNBP2Q9H3C7 697 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 PCMTD2Q9NV79 361 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 RNF112Q9ULX5 631 aa5.29□□□□□ -1.56
BRCA2-203ENST00000528762 TM4SF5O14894 197 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 MED26O95402 600 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 TGFB1P01137 390 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 NPR3P17342 541 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 MPSTP25325 297 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 ARHGAP4P98171 946 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 DUOXA2Q1HG44 320 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 Q6ZS46 218 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 KIAA1211Q6ZU35 1233 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 MAP4K3Q8IVH8 894 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 CEP120Q8N960 986 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 GIPC2Q8TF65 315 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 SLC7A3Q8WY07 619 aa5.28□□□□□ -1.56
BRCA2-203ENST00000528762 UTP4Q969X6 686 aaKnown RBP5.28□□□□□ -1.56
BRCA2-203ENST00000528762 ASB16Q96NS5 453 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms