RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 RRP36Q96EU6 259 aaKnown RBP9.68□□□□□ -0.86
CTNND1-219ENST00000528621 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 MMRN2Q9H8L6 949 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 MACROD2A1Z1Q3 448 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 SPDYE4A6NLX3 237 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 NF2P35240 595 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 NAPAP54920 295 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 PICALMQ13492 652 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
CTNND1-219ENST00000528621 DHX37Q8IY37 1157 aaKnown RBP9.68□□□□□ -0.86
CTNND1-219ENST00000528621 C8orf58Q8NAV2 365 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 LMBR1Q8WVP7 490 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 DCAF5Q96JK2 942 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 RASAL2Q9UJF2 1139 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNND1-219ENST00000528621 ABCA5Q8WWZ7 1642 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 UBASH3AP57075 661 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 PRPF4BQ13523 1007 aaKnown RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 ANO6Q4KMQ2 910 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 CDCA7Q9BWT1 371 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 JADE2Q9NQC1 790 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 YTHDC2Q9H6S0 1430 aaKnown RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 KRT13P13646 458 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 AFMP43652 599 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 INTS4Q96HW7 963 aaKnown RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 SELENOOQ9BVL4 669 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 SRRTQ9BXP5 876 aaKnown RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 DCTPP1Q9H773 170 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 EDC4Q6P2E9 1401 aaKnown RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 DYNC1I1O14576 645 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 POLR3GO15318 223 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 HSF2BPO75031 334 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 SMARCC2Q8TAQ2 1214 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 TRAPPC8Q9Y2L5 1435 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 N4BP3O15049 544 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 PPP1R2P41236 205 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.865e-6■□□□□ 9.8
CTNND1-219ENST00000528621 BMS1Q14692 1282 aaKnown RBP9.67□□□□□ -0.86
CTNND1-219ENST00000528621 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 TSNARE1Q96NA8 513 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
CTNND1-219ENST00000528621 CBX1P83916 185 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 FAM200AQ8TCP9 573 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 CALCOCO1Q9P1Z2 691 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 CEP85Q6P2H3 762 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 GIMAP6Q6P9H5 292 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 STX8Q9UNK0 236 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 PSMA7O14818 248 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 LMAN1P49257 510 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 CERS3Q8IU89 383 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 RBM17Q96I25 401 aaKnown RBP9.66□□□□□ -0.86
CTNND1-219ENST00000528621 STMN4Q9H169 189 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-219ENST00000528621 POLKQ9UBT6 870 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 KIF24Q5T7B8 1368 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 HOXB7P09629 217 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 FBLN1P23142 703 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 KRT83P78385 493 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 ATP7AQ04656 1500 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 CEP112Q8N8E3 955 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 LRRC2Q9BYS8 371 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 F8W031 263 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-219ENST00000528621 TOM1O60784 492 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 DDB1Q16531 1140 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 SPECC1LQ69YQ0 1117 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 MAGEB6Q8N7X4 407 aa9.66□□□□□ -0.86
CTNND1-219ENST00000528621 SREK1Q8WXA9 508 aaKnown RBP9.66□□□□□ -0.86
CTNND1-219ENST00000528621 KDM5AP29375 1690 aaKnown RBP9.65□□□□□ -0.86
CTNND1-219ENST00000528621 TFCP2Q12800 502 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 RNF187Q5TA31 235 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-219ENST00000528621 EYA3Q99504 573 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
CTNND1-219ENST00000528621 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 SBNO1A3KN83 1393 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 CCDC155Q8N6L0 562 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 IP6K1Q92551 441 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 A0A1W2PP64 1363 aa9.65□□□□□ -0.86
CTNND1-219ENST00000528621 FSD2A1L4K1 749 aa9.65□□□□□ -0.87
CTNND1-219ENST00000528621 SMC5Q8IY18 1101 aa9.65□□□□□ -0.87
CTNND1-219ENST00000528621 TSGA10Q9BZW7 698 aa9.65□□□□□ -0.87
CTNND1-219ENST00000528621 IRS4O14654 1257 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-219ENST00000528621 PPM1FP49593 454 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-219ENST00000528621 GIMAP7Q8NHV1 300 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 SYNCQ9H7C4 482 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 DENND2AQ9ULE3 1009 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 TRIM75PA6NK02 468 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 HOXC9P31274 260 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 HS1BP3Q53T59 392 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
CTNND1-219ENST00000528621 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms