RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
CMTM1-210ENST00000528441 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 HAX1O00165 279 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 TAF5LO75529 589 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 CT47B1P0C2W7 299 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-210ENST00000528441 RPS12P25398 132 aaKnown RBP11.4□□□□□ -0.58
CMTM1-210ENST00000528441 CASP7P55210 303 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.58
CMTM1-210ENST00000528441 FRAT1Q92837 279 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-210ENST00000528441 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
CMTM1-210ENST00000528441 ZNF594Q96JF6 807 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-210ENST00000528441 NOB1Q9ULX3 412 aaKnown RBP11.4□□□□□ -0.58
CMTM1-210ENST00000528441 MED23Q9ULK4 1368 aa11.4□□□□□ -0.59
CMTM1-210ENST00000528441 KIF16BQ96L93 1317 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 SHTN1A0MZ66 631 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 CSF1RP07333 972 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 FOXO4P98177 505 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 KIF4BQ2VIQ3 1234 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 VPS37DQ86XT2 251 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 TRPM4Q8TD43 1214 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 KCNQ5Q9NR82 932 aa11.39□□□□□ -0.59
CMTM1-210ENST00000528441 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-210ENST00000528441 TRAF5O00463 557 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 FRAT2O75474 233 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-210ENST00000528441 CELF2O95319 508 aaKnown RBP11.38□□□□□ -0.59
CMTM1-210ENST00000528441 NBPF7P0C2Y1 421 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-210ENST00000528441 UBTFL1P0CB47 393 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-210ENST00000528441 METTL24Q5JXM2 366 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 EPHA10Q5JZY3 1008 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-210ENST00000528441 ZNF804AQ7Z570 1209 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 DPF2Q92785 391 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 GLIS2Q9BZE0 524 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-210ENST00000528441 COA1Q9GZY4 146 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
CMTM1-210ENST00000528441 HDAC9Q9UKV0 1011 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
CMTM1-210ENST00000528441 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
CMTM1-210ENST00000528441 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
CMTM1-210ENST00000528441 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
CMTM1-210ENST00000528441 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
CMTM1-210ENST00000528441 PASKQ96RG2 1323 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 ITGBL1O95965 494 aaPredicted RBP11.36□□□□□ -0.59
CMTM1-210ENST00000528441 VIL1P09327 827 aaKnown RBP11.36□□□□□ -0.59
CMTM1-210ENST00000528441 USP17L8P0C7I0 530 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 GTF2IP78347 998 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 TTLL5Q6EMB2 1281 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 AGBL3Q8NEM8 1001 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 GGA3Q9NZ52 723 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 JAG2Q9Y219 1238 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 ADAMTSL1Q8N6G6 1762 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 SCN9AQ15858 1988 aa11.36□□□□□ -0.59
CMTM1-210ENST00000528441 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 WTIPA6NIX2 430 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 F8W031 263 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 SNAP23O00161 211 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 KLRK1P26718 216 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 ECE1P42892 770 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 RBM5P52756 815 aaKnown RBP eCLIP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 FMR1Q06787 632 aaKnown RBP eCLIP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 FTSJ3Q8IY81 847 aaKnown RBP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 DNAJC5GQ8N7S2 189 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 ZC3H15Q8WU90 426 aaKnown RBP11.35□□□□□ -0.59
CMTM1-210ENST00000528441 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 MXD3Q9BW11 206 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
CMTM1-210ENST00000528441 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
CMTM1-210ENST00000528441 RARSP54136 660 aaKnown RBP11.34□□□□□ -0.59
CMTM1-210ENST00000528441 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
CMTM1-210ENST00000528441 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
CMTM1-210ENST00000528441 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
CMTM1-210ENST00000528441 STRIP1Q5VSL9 837 aa11.34□□□□□ -0.59
CMTM1-210ENST00000528441 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
CMTM1-210ENST00000528441 TXNRD3Q86VQ6 643 aa11.34□□□□□ -0.59
CMTM1-210ENST00000528441 CLUAP1Q96AJ1 413 aa11.34□□□□□ -0.59
CMTM1-210ENST00000528441 SIL1Q9H173 461 aa11.34□□□□□ -0.59
CMTM1-210ENST00000528441 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
CMTM1-210ENST00000528441 PSME4Q14997 1843 aa11.33□□□□□ -0.6
CMTM1-210ENST00000528441 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
CMTM1-210ENST00000528441 ADM5C9JUS6 153 aa11.33□□□□□ -0.6
CMTM1-210ENST00000528441 CHAF1AQ13111 956 aaPredicted RBP11.33□□□□□ -0.6
CMTM1-210ENST00000528441 SCARF1Q14162 830 aa11.33□□□□□ -0.6
CMTM1-210ENST00000528441 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
CMTM1-210ENST00000528441 KLHDC4Q8TBB5 520 aa11.33□□□□□ -0.6
CMTM1-210ENST00000528441 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
CMTM1-210ENST00000528441 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
CMTM1-210ENST00000528441 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms