RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	GML	Q99445	158 aa		14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	PUS3	Q9BZE2	481 aa	Known RBP	14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	PGAP2	Q9UHJ9	254 aa		14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	MYH3	P11055	1940 aa		14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	TMEM88B	A6NKF7	163 aa		14.79	□□□□□ -0.04
PSMC3-205	ENST00000528362	TRAF5	O00463	557 aa		14.79	□□□□□ -0.04
PSMC3-205	ENST00000528362	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	14.79	□□□□□ -0.04
PSMC3-205	ENST00000528362	C15orf52	Q6ZUT6	534 aa	Known RBP	14.79	□□□□□ -0.04
PSMC3-205	ENST00000528362	AGBL3	Q8NEM8	1001 aa		14.79	□□□□□ -0.04
PSMC3-205	ENST00000528362	ZC3H15	Q8WU90	426 aa	Known RBP	14.79	□□□□□ -0.04
PSMC3-205	ENST00000528362	CNNM1	Q9NRU3	951 aa		14.79	□□□□□ -0.04
PSMC3-205	ENST00000528362	ZBED9	Q6R2W3	1325 aa		14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	BCAR3	O75815	825 aa		14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	ZNF280A	P59817	542 aa	Predicted RBP	14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	DACT2	Q5SW24	774 aa		14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	ARHGAP45	Q92619	1136 aa		14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	MXD3	Q9BW11	206 aa		14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	GLIS2	Q9BZE0	524 aa	Predicted RBP	14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	PCNT	O95613	3336 aa		14.78	□□□□□ -0.04
PSMC3-205	ENST00000528362	PLIN1	O60240	522 aa		14.77	□□□□□ -0.05
PSMC3-205	ENST00000528362	KIF4B	Q2VIQ3	1234 aa		14.77	□□□□□ -0.05
PSMC3-205	ENST00000528362	RBM26	Q5T8P6	1007 aa	Known RBP	14.77	□□□□□ -0.05
PSMC3-205	ENST00000528362	STRIP1	Q5VSL9	837 aa		14.77	□□□□□ -0.05
PSMC3-205	ENST00000528362	CD209	Q9NNX6	404 aa		14.77	□□□□□ -0.05
PSMC3-205	ENST00000528362	MKRN1	Q9UHC7	482 aa	Known RBP	14.77	□□□□□ -0.05
PSMC3-205	ENST00000528362	RIPOR2	Q9Y4F9	1068 aa		14.77	□□□□□ -0.05
PSMC3-205	ENST00000528362	SCN9A	Q15858	1988 aa		14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	CNTNAP1	P78357	1384 aa		14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	UBTFL1	P0CB47	393 aa	Predicted RBP	14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	TRIM27	P14373	513 aa		14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	LRRC24	Q50LG9	513 aa		14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	INTS3	Q68E01	1043 aa	Known RBP	14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	KLHDC4	Q8TBB5	520 aa		14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	MEIS3	Q99687	375 aa		14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	TNN	Q9UQP3	1299 aa		14.76	□□□□□ -0.05
PSMC3-205	ENST00000528362	ASTN2	O75129	1339 aa	Predicted RBP	14.75	□□□□□ -0.05
PSMC3-205	ENST00000528362	USP17L8	P0C7I0	530 aa		14.75	□□□□□ -0.05
PSMC3-205	ENST00000528362	RFX5	P48382	616 aa	Predicted RBP	14.75	□□□□□ -0.05
PSMC3-205	ENST00000528362	CST9	Q5W186	159 aa		14.75	□□□□□ -0.05
PSMC3-205	ENST00000528362	ATF7IP	Q6VMQ6	1270 aa		14.75	□□□□□ -0.05
PSMC3-205	ENST00000528362	FBXW7	Q969H0	707 aa		14.75	□□□□□ -0.05
PSMC3-205	ENST00000528362	SPEF2	Q9C093	1822 aa		14.75	□□□□□ -0.05
PSMC3-205	ENST00000528362	MROH5	Q6ZUA9	1318 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	IPO8	O15397	1037 aa	Known RBP	14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	IL1R1	P14778	569 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	GTF2I	P78347	998 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	UBE4A	Q14139	1066 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	TTLL5	Q6EMB2	1281 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	CDC37L1	Q7L3B6	337 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	ZNF804A	Q7Z570	1209 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	VGLL2	Q8N8G2	317 aa		14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	FRAT1	Q92837	279 aa	Predicted RBP	14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	LRRFIP2	Q9Y608	721 aa	Known RBP	14.74	□□□□□ -0.05
PSMC3-205	ENST00000528362	MYO3B	Q8WXR4	1341 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	RASSF10	A6NK89	507 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	PTPN12	Q05209	780 aa	Known RBP	14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	METTL24	Q5JXM2	366 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	DLK2	Q6UY11	383 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	KRT26	Q7Z3Y9	468 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	USP48	Q86UV5	1035 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	MYOZ2	Q9NPC6	264 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	GGA3	Q9NZ52	723 aa		14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	ABT1	Q9ULW3	272 aa	Known RBP	14.73	□□□□□ -0.05
PSMC3-205	ENST00000528362	CELF2	O95319	508 aa	Known RBP	14.72	□□□□□ -0.05
PSMC3-205	ENST00000528362	SCARF1	Q14162	830 aa		14.72	□□□□□ -0.05
PSMC3-205	ENST00000528362	CERS5	Q8N5B7	392 aa		14.72	□□□□□ -0.05
PSMC3-205	ENST00000528362	CLUAP1	Q96AJ1	413 aa		14.72	□□□□□ -0.05
PSMC3-205	ENST00000528362	ADM5	C9JUS6	153 aa		14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	EYA2	O00167	538 aa		14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	PDE8B	O95263	885 aa		14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	GYG1	P46976	350 aa		14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	VEGFB	P49765	207 aa		14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	COL13A1	Q5TAT6	717 aa	Predicted RBP	14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	KIAA0825	Q8IV33	1275 aa		14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	DCPS	Q96C86	337 aa	Known RBP	14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	FAM84B	Q96KN1	310 aa	Predicted RBP	14.71	□□□□□ -0.05
PSMC3-205	ENST00000528362	GNAI3	P08754	354 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	HIBADH	P31937	336 aa	Known RBP	14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	ANGEL2	Q5VTE6	544 aa	Known RBP	14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	ZKSCAN2	Q63HK3	967 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	ATG9A	Q7Z3C6	839 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	OGFOD1	Q8N543	542 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	TDRD7	Q8NHU6	1098 aa	Known RBP	14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	ZNF408	Q9H9D4	720 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	HDAC5	Q9UQL6	1122 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	JAG2	Q9Y219	1238 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	TLL2	Q9Y6L7	1015 aa		14.7	□□□□□ -0.06
PSMC3-205	ENST00000528362	FGFR2	P21802	821 aa		14.69	□□□□□ -0.06
PSMC3-205	ENST00000528362	DEFB115	Q30KQ5	88 aa		14.69	□□□□□ -0.06
PSMC3-205	ENST00000528362	NBPF9	Q3BBW0	867 aa		14.69	□□□□□ -0.06
PSMC3-205	ENST00000528362	FBXO33	Q7Z6M2	555 aa		14.69	□□□□□ -0.06
PSMC3-205	ENST00000528362	SULF1	Q8IWU6	871 aa		14.69	□□□□□ -0.06
PSMC3-205	ENST00000528362	FAM205A	Q6ZU69	1335 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	WNT10B	O00744	389 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	CIAO1	O76071	339 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	SASH1	O94885	1247 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	MMP14	P50281	582 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	FKBP1A	P62942	108 aa	Known RBP	14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	PUM3	Q15397	648 aa	Known RBP	14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	SAPCD2	Q86UD0	394 aa		14.68	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms