RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 LDHAL6AQ6ZMR3 332 aa12.1□□□□□ -0.47
CHD7-208ENST00000528280 CDCA7LQ96GN5 454 aa12.1□□□□□ -0.47
CHD7-208ENST00000528280 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
CHD7-208ENST00000528280 UTYO14607 1347 aa12.1□□□□□ -0.47
CHD7-208ENST00000528280 MYH3P11055 1940 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
CHD7-208ENST00000528280 CHRNDQ07001 517 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 OGFOD1Q8N543 542 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 DCPSQ96C86 337 aaKnown RBP12.09□□□□□ -0.47
CHD7-208ENST00000528280 KCNQ5Q9NR82 932 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 ABT1Q9ULW3 272 aaKnown RBP12.09□□□□□ -0.47
CHD7-208ENST00000528280 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
CHD7-208ENST00000528280 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
CHD7-208ENST00000528280 ECE1P42892 770 aa12.08□□□□□ -0.48
CHD7-208ENST00000528280 PRPF38BQ5VTL8 546 aaKnown RBP12.08□□□□□ -0.48
CHD7-208ENST00000528280 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
CHD7-208ENST00000528280 CAPNS2Q96L46 248 aa12.08□□□□□ -0.48
CHD7-208ENST00000528280 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
CHD7-208ENST00000528280 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
CHD7-208ENST00000528280 CNNM1Q9NRU3 951 aa12.08□□□□□ -0.48
CHD7-208ENST00000528280 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
CHD7-208ENST00000528280 HIRAP54198 1017 aaPredicted RBP12.07□□□□□ -0.48
CHD7-208ENST00000528280 ZNF280AP59817 542 aaPredicted RBP12.07□□□□□ -0.48
CHD7-208ENST00000528280 TTLL5Q6EMB2 1281 aa12.07□□□□□ -0.48
CHD7-208ENST00000528280 ARHGAP45Q92619 1136 aa12.07□□□□□ -0.48
CHD7-208ENST00000528280 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
CHD7-208ENST00000528280 ZNF609O15014 1411 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 NBPF7P0C2Y1 421 aaPredicted RBP12.06□□□□□ -0.48
CHD7-208ENST00000528280 MAP2K2P36507 400 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 DGKZQ13574 1117 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 TBC1D10BQ4KMP7 808 aaPredicted RBP12.06□□□□□ -0.48
CHD7-208ENST00000528280 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
CHD7-208ENST00000528280 SAMD7Q7Z3H4 446 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 ZNF804AQ7Z570 1209 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 MIER1Q8N108 512 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 GMLQ99445 158 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 HDAC9Q9UKV0 1011 aa12.06□□□□□ -0.48
CHD7-208ENST00000528280 CA12O43570 354 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 UBE4AQ14139 1066 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
CHD7-208ENST00000528280 EPHA10Q5JZY3 1008 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 CST9Q5W186 159 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 CYP4F22Q6NT55 531 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 TRPM4Q8TD43 1214 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 SUCLG2Q96I99 432 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 HHIPL1Q96JK4 782 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 CD209Q9NNX6 404 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 NOB1Q9ULX3 412 aaKnown RBP12.05□□□□□ -0.48
CHD7-208ENST00000528280 MROH5Q6ZUA9 1318 aa12.05□□□□□ -0.48
CHD7-208ENST00000528280 TRAF5O00463 557 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 CELF2O95319 508 aaKnown RBP12.04□□□□□ -0.48
CHD7-208ENST00000528280 DACT2Q5SW24 774 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 USP48Q86UV5 1035 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 GLIS2Q9BZE0 524 aaPredicted RBP12.04□□□□□ -0.48
CHD7-208ENST00000528280 BICC1Q9H694 974 aaKnown RBP12.04□□□□□ -0.48
CHD7-208ENST00000528280 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 TLL2Q9Y6L7 1015 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
CHD7-208ENST00000528280 COL4A1P02462 1669 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 WTIPA6NIX2 430 aaPredicted RBP12.03□□□□□ -0.48
CHD7-208ENST00000528280 PLIN1O60240 522 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 TAF5LO75529 589 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
CHD7-208ENST00000528280 FKBP1AP62942 108 aaKnown RBP12.03□□□□□ -0.48
CHD7-208ENST00000528280 SCARF1Q14162 830 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 TXNRD3Q86VQ6 643 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 C2orf69Q8N8R5 385 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 HELBQ8NG08 1087 aaPredicted RBP12.03□□□□□ -0.48
CHD7-208ENST00000528280 KAZALD1Q96I82 304 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
CHD7-208ENST00000528280 RIPOR2Q9Y4F9 1068 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 PITPNM2Q9BZ72 1349 aa12.03□□□□□ -0.48
CHD7-208ENST00000528280 SHTN1A0MZ66 631 aa12.02□□□□□ -0.49
CHD7-208ENST00000528280 AOC2O75106 756 aa12.02□□□□□ -0.49
CHD7-208ENST00000528280 SASH1O94885 1247 aa12.02□□□□□ -0.49
CHD7-208ENST00000528280 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
CHD7-208ENST00000528280 IL1R1P14778 569 aa12.02□□□□□ -0.49
CHD7-208ENST00000528280 GTF2IP78347 998 aa12.02□□□□□ -0.49
CHD7-208ENST00000528280 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
CHD7-208ENST00000528280 SAPCD2Q86UD0 394 aa12.02□□□□□ -0.49
CHD7-208ENST00000528280 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
CHD7-208ENST00000528280 HIBADHP31937 336 aaKnown RBP12.01□□□□□ -0.49
CHD7-208ENST00000528280 HNRNPUQ00839 825 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHD7-208ENST00000528280 GRM1Q13255 1194 aa12.01□□□□□ -0.49
CHD7-208ENST00000528280 CAVIN4Q5BKX8 364 aa12.01□□□□□ -0.49
CHD7-208ENST00000528280 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
CHD7-208ENST00000528280 PDE8BO95263 885 aa12□□□□□ -0.49
CHD7-208ENST00000528280 EGFRP00533 1210 aa12□□□□□ -0.49
CHD7-208ENST00000528280 GNAI3P08754 354 aa12□□□□□ -0.49
CHD7-208ENST00000528280 SOX10P56693 466 aa12□□□□□ -0.49
CHD7-208ENST00000528280 FKBP1BP68106 108 aa12□□□□□ -0.49
CHD7-208ENST00000528280 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms