RNA–Protein interactions for RNA: ENST00000527955.5

GPA33-202, Transcript of glycoprotein A33, humanhuman

TSL 5

Gene GPA33, Length 2,549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33-202ENST00000527955 PKP1Q13835 747 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 L1TD1Q5T7N2 865 aaKnown RBP16.74■□□□□ 0.27
GPA33-202ENST00000527955 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 RUFY3Q7L099 469 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
GPA33-202ENST00000527955 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 C4AP0C0L4 1744 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 BRWD3Q6RI45 1802 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 BICDL1Q6ZP65 573 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 LPIN2Q92539 896 aa16.74■□□□□ 0.27
GPA33-202ENST00000527955 NAP1L5Q96NT1 182 aaPredicted RBP16.74■□□□□ 0.27
GPA33-202ENST00000527955 MAST3O60307 1309 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 ZPR1O75312 459 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 CLCN1P35523 988 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 IGHMBP2P38935 993 aaKnown RBP16.73■□□□□ 0.27
GPA33-202ENST00000527955 COL9A3Q14050 684 aaPredicted RBP16.73■□□□□ 0.27
GPA33-202ENST00000527955 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 CLEC17AQ6ZS10 378 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 ARHGEF1Q92888 912 aaKnown RBP16.73■□□□□ 0.27
GPA33-202ENST00000527955 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 LIMCH1Q9UPQ0 1083 aa16.73■□□□□ 0.27
GPA33-202ENST00000527955 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
GPA33-202ENST00000527955 SF3B3Q15393 1217 aaKnown RBP16.72■□□□□ 0.27
GPA33-202ENST00000527955 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
GPA33-202ENST00000527955 PSMA5P28066 241 aa16.72■□□□□ 0.27
GPA33-202ENST00000527955 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
GPA33-202ENST00000527955 PHKA1P46020 1223 aa16.72■□□□□ 0.27
GPA33-202ENST00000527955 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
GPA33-202ENST00000527955 TAF1P21675 1872 aa16.72■□□□□ 0.27
GPA33-202ENST00000527955 MYO5AQ9Y4I1 1855 aaKnown RBP16.72■□□□□ 0.27
GPA33-202ENST00000527955 ZFYP08048 801 aaPredicted RBP16.71■□□□□ 0.27
GPA33-202ENST00000527955 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
GPA33-202ENST00000527955 OSBP2Q969R2 916 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 DSCC1Q9BVC3 393 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 LRRC4BQ9NT99 713 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 DDX11L8A8MPP1 907 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 M0R2C6 588 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 SNAP23O00161 211 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 SETDB2Q96T68 719 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 LARP6Q9BRS8 491 aaKnown RBP16.71■□□□□ 0.27
GPA33-202ENST00000527955 ZDHHC9Q9Y397 364 aa16.71■□□□□ 0.27
GPA33-202ENST00000527955 A0A1B0GUL6 1792 aa16.71■□□□□ 0.26
GPA33-202ENST00000527955 CYP21A2P08686 494 aa16.7■□□□□ 0.26
GPA33-202ENST00000527955 SLC5A1P13866 664 aa16.7■□□□□ 0.26
GPA33-202ENST00000527955 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
GPA33-202ENST00000527955 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
GPA33-202ENST00000527955 UQCRFS1P1P0C7P4 283 aa16.69■□□□□ 0.26
GPA33-202ENST00000527955 HSPD1P10809 573 aaKnown RBP16.69■□□□□ 0.26
GPA33-202ENST00000527955 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
GPA33-202ENST00000527955 FAM196AQ6ZSG2 479 aa16.69■□□□□ 0.26
GPA33-202ENST00000527955 LARGE1O95461 756 aa16.69■□□□□ 0.26
GPA33-202ENST00000527955 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
GPA33-202ENST00000527955 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
GPA33-202ENST00000527955 CHRNDQ07001 517 aa16.69■□□□□ 0.26
GPA33-202ENST00000527955 KRT32Q14532 448 aa16.69■□□□□ 0.26
GPA33-202ENST00000527955 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
GPA33-202ENST00000527955 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
GPA33-202ENST00000527955 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
GPA33-202ENST00000527955 PHF14O94880 888 aa16.68■□□□□ 0.26
GPA33-202ENST00000527955 BAG4O95429 457 aaKnown RBP16.68■□□□□ 0.26
GPA33-202ENST00000527955 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
GPA33-202ENST00000527955 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
GPA33-202ENST00000527955 APPBP2Q92624 585 aa16.68■□□□□ 0.26
GPA33-202ENST00000527955 ALDH8A1Q9H2A2 487 aaPredicted RBP16.68■□□□□ 0.26
GPA33-202ENST00000527955 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
GPA33-202ENST00000527955 RFC4P35249 363 aa16.67■□□□□ 0.26
GPA33-202ENST00000527955 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
GPA33-202ENST00000527955 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
GPA33-202ENST00000527955 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.67■□□□□ 0.26
GPA33-202ENST00000527955 LAMA4Q16363 1823 aa16.67■□□□□ 0.26
GPA33-202ENST00000527955 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
GPA33-202ENST00000527955 PUS7LQ9H0K6 701 aaKnown RBP16.67■□□□□ 0.26
GPA33-202ENST00000527955 BSDC1Q9NW68 430 aaPredicted RBP16.67■□□□□ 0.26
GPA33-202ENST00000527955 DOCK2Q92608 1830 aa16.67■□□□□ 0.26
GPA33-202ENST00000527955 FOXP2O15409 715 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 ADD2P35612 726 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 RASGRF1Q13972 1273 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 TCEANC2Q96MN5 208 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
GPA33-202ENST00000527955 TRAK2O60296 914 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 ME3Q16798 604 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 TPCN1Q9ULQ1 816 aa16.66■□□□□ 0.26
GPA33-202ENST00000527955 BRD1O95696 1058 aa16.65■□□□□ 0.26
GPA33-202ENST00000527955 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
GPA33-202ENST00000527955 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
GPA33-202ENST00000527955 CELF1Q92879 486 aaKnown RBP16.65■□□□□ 0.26
GPA33-202ENST00000527955 NLRP3Q96P20 1036 aa16.65■□□□□ 0.26
GPA33-202ENST00000527955 ADRA2BP18089 450 aa16.65■□□□□ 0.26
GPA33-202ENST00000527955 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
GPA33-202ENST00000527955 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
GPA33-202ENST00000527955 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
GPA33-202ENST00000527955 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.65■□□□□ 0.26
GPA33-202ENST00000527955 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
GPA33-202ENST00000527955 TRIM37O94972 964 aa16.64■□□□□ 0.25
GPA33-202ENST00000527955 BCAMP50895 628 aa16.64■□□□□ 0.25
GPA33-202ENST00000527955 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms