RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PSME4Q14997 1843 aa19.55■□□□□ 0.72
CAPN1-213ENST00000527897 EGFRP00533 1210 aa19.55■□□□□ 0.72
CAPN1-213ENST00000527897 COA1Q9GZY4 146 aa19.55■□□□□ 0.72
CAPN1-213ENST00000527897 ZNF408Q9H9D4 720 aa19.55■□□□□ 0.72
CAPN1-213ENST00000527897 A0A1B0GUL6 1792 aa19.55■□□□□ 0.72
CAPN1-213ENST00000527897 UTYO14607 1347 aa19.54■□□□□ 0.72
CAPN1-213ENST00000527897 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
CAPN1-213ENST00000527897 KIF4BQ2VIQ3 1234 aa19.54■□□□□ 0.72
CAPN1-213ENST00000527897 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
CAPN1-213ENST00000527897 TRPM7Q96QT4 1865 aa19.54■□□□□ 0.72
CAPN1-213ENST00000527897 JMYQ8N9B5 988 aa19.53■□□□□ 0.72
CAPN1-213ENST00000527897 ZC3H15Q8WU90 426 aaKnown RBP19.53■□□□□ 0.72
CAPN1-213ENST00000527897 API5Q9BZZ5 524 aaKnown RBP19.53■□□□□ 0.72
CAPN1-213ENST00000527897 USP44Q9H0E7 712 aa19.53■□□□□ 0.72
CAPN1-213ENST00000527897 PAXIP1Q6ZW49 1069 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-213ENST00000527897 AGBL3Q8NEM8 1001 aa19.52■□□□□ 0.72
CAPN1-213ENST00000527897 PUS3Q9BZE2 481 aaKnown RBP19.52■□□□□ 0.72
CAPN1-213ENST00000527897 CNTNAP1P78357 1384 aa19.52■□□□□ 0.72
CAPN1-213ENST00000527897 USP17L8P0C7I0 530 aa19.51■□□□□ 0.71
CAPN1-213ENST00000527897 CDC37L1Q7L3B6 337 aa19.51■□□□□ 0.71
CAPN1-213ENST00000527897 USP48Q86UV5 1035 aa19.51■□□□□ 0.71
CAPN1-213ENST00000527897 ANKRD44Q8N8A2 993 aa19.51■□□□□ 0.71
CAPN1-213ENST00000527897 PGAP2Q9UHJ9 254 aa19.51■□□□□ 0.71
CAPN1-213ENST00000527897 POLR2AP24928 1970 aaKnown RBP19.51■□□□□ 0.71
CAPN1-213ENST00000527897 CELF2O95319 508 aaKnown RBP19.5■□□□□ 0.71
CAPN1-213ENST00000527897 GTF2IP78347 998 aa19.5■□□□□ 0.71
CAPN1-213ENST00000527897 GRM1Q13255 1194 aa19.5■□□□□ 0.71
CAPN1-213ENST00000527897 DEFB115Q30KQ5 88 aa19.5■□□□□ 0.71
CAPN1-213ENST00000527897 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-213ENST00000527897 DACT2Q5SW24 774 aa19.5■□□□□ 0.71
CAPN1-213ENST00000527897 TTLL5Q6EMB2 1281 aa19.5■□□□□ 0.71
CAPN1-213ENST00000527897 FRAT1Q92837 279 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-213ENST00000527897 DCPSQ96C86 337 aaKnown RBP19.5■□□□□ 0.71
CAPN1-213ENST00000527897 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
CAPN1-213ENST00000527897 UBTFL1P0CB47 393 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-213ENST00000527897 CST9Q5W186 159 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 DLK2Q6UY11 383 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 KRT26Q7Z3Y9 468 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 ZNF804AQ7Z570 1209 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 KLHDC4Q8TBB5 520 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 GMLQ99445 158 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 CD209Q9NNX6 404 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 GGA3Q9NZ52 723 aa19.49■□□□□ 0.71
CAPN1-213ENST00000527897 ASTN2O75129 1339 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-213ENST00000527897 VEGFBP49765 207 aa19.48■□□□□ 0.71
CAPN1-213ENST00000527897 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-213ENST00000527897 STRIP1Q5VSL9 837 aa19.48■□□□□ 0.71
CAPN1-213ENST00000527897 MYOZ2Q9NPC6 264 aa19.48■□□□□ 0.71
CAPN1-213ENST00000527897 ADM5C9JUS6 153 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 BCAR3O75815 825 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 HSPA1AP0DMV8 641 aaKnown RBP19.47■□□□□ 0.71
CAPN1-213ENST00000527897 HSPA1BP0DMV9 641 aaKnown RBP19.47■□□□□ 0.71
CAPN1-213ENST00000527897 BRPF1P55201 1214 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-213ENST00000527897 SCARF1Q14162 830 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 LRRC24Q50LG9 513 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 METTL24Q5JXM2 366 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 OGFOD1Q8N543 542 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 JAG2Q9Y219 1238 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 MYO3BQ8WXR4 1341 aa19.47■□□□□ 0.71
CAPN1-213ENST00000527897 ZNF646O15015 1829 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-213ENST00000527897 ZNF609O15014 1411 aa19.46■□□□□ 0.71
CAPN1-213ENST00000527897 ANGEL2Q5VTE6 544 aaKnown RBP19.46■□□□□ 0.71
CAPN1-213ENST00000527897 KIAA0825Q8IV33 1275 aa19.46■□□□□ 0.71
CAPN1-213ENST00000527897 SULF1Q8IWU6 871 aa19.46■□□□□ 0.71
CAPN1-213ENST00000527897 RIPOR2Q9Y4F9 1068 aa19.46■□□□□ 0.71
CAPN1-213ENST00000527897 MROH5Q6ZUA9 1318 aa19.46■□□□□ 0.71
CAPN1-213ENST00000527897 IRS2Q9Y4H2 1338 aa19.46■□□□□ 0.71
CAPN1-213ENST00000527897 RASSF10A6NK89 507 aa19.45■□□□□ 0.7
CAPN1-213ENST00000527897 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
CAPN1-213ENST00000527897 C15orf52Q6ZUT6 534 aaKnown RBP19.45■□□□□ 0.7
CAPN1-213ENST00000527897 GYG1P46976 350 aa19.44■□□□□ 0.7
CAPN1-213ENST00000527897 UBE4AQ14139 1066 aa19.44■□□□□ 0.7
CAPN1-213ENST00000527897 CYP4F22Q6NT55 531 aa19.44■□□□□ 0.7
CAPN1-213ENST00000527897 CLUAP1Q96AJ1 413 aa19.44■□□□□ 0.7
CAPN1-213ENST00000527897 MEIS3Q99687 375 aa19.44■□□□□ 0.7
CAPN1-213ENST00000527897 SCAF8Q9UPN6 1271 aaKnown RBP19.44■□□□□ 0.7
CAPN1-213ENST00000527897 TNNQ9UQP3 1299 aa19.44■□□□□ 0.7
CAPN1-213ENST00000527897 LRRFIP2Q9Y608 721 aaKnown RBP19.44■□□□□ 0.7
CAPN1-213ENST00000527897 TLL2Q9Y6L7 1015 aa19.44■□□□□ 0.7
CAPN1-213ENST00000527897 F8W031 263 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-213ENST00000527897 VPS37DQ86XT2 251 aa19.43■□□□□ 0.7
CAPN1-213ENST00000527897 ARHGAP45Q92619 1136 aa19.43■□□□□ 0.7
CAPN1-213ENST00000527897 HDAC9Q9UKV0 1011 aa19.43■□□□□ 0.7
CAPN1-213ENST00000527897 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
CAPN1-213ENST00000527897 SASH1O94885 1247 aa19.42■□□□□ 0.7
CAPN1-213ENST00000527897 TRIM27P14373 513 aa19.42■□□□□ 0.7
CAPN1-213ENST00000527897 IL1R1P14778 569 aa19.42■□□□□ 0.7
CAPN1-213ENST00000527897 HIBADHP31937 336 aaKnown RBP19.42■□□□□ 0.7
CAPN1-213ENST00000527897 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
CAPN1-213ENST00000527897 CAPNS2Q96L46 248 aa19.42■□□□□ 0.7
CAPN1-213ENST00000527897 SIL1Q9H173 461 aa19.42■□□□□ 0.7
CAPN1-213ENST00000527897 HDAC5Q9UQL6 1122 aa19.42■□□□□ 0.7
CAPN1-213ENST00000527897 ECE1P42892 770 aa19.41■□□□□ 0.7
CAPN1-213ENST00000527897 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
CAPN1-213ENST00000527897 SAPCD2Q86UD0 394 aa19.41■□□□□ 0.7
CAPN1-213ENST00000527897 IQSEC3Q9UPP2 1182 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-213ENST00000527897 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
CAPN1-213ENST00000527897 FRAT2O75474 233 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-213ENST00000527897 PDE8BO95263 885 aa19.4■□□□□ 0.7
CAPN1-213ENST00000527897 INTS3Q68E01 1043 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms