RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 BEND3Q5T5X7 828 aa15.7■□□□□ 0.1
SCN3B-204ENST00000527836 OGFOD1Q8N543 542 aa15.7■□□□□ 0.1
SCN3B-204ENST00000527836 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
SCN3B-204ENST00000527836 E9PSI1 815 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 GRM8O00222 908 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 CAPN15O75808 1086 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 EGFRP00533 1210 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 SAPCD2Q86UD0 394 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 COA1Q9GZY4 146 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 WBP1LQ9NX94 342 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 GGA3Q9NZ52 723 aa15.69■□□□□ 0.1
SCN3B-204ENST00000527836 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
SCN3B-204ENST00000527836 ALDH1L1O75891 902 aa15.68■□□□□ 0.1
SCN3B-204ENST00000527836 CHRNDQ07001 517 aa15.68■□□□□ 0.1
SCN3B-204ENST00000527836 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
SCN3B-204ENST00000527836 C2orf69Q8N8R5 385 aa15.68■□□□□ 0.1
SCN3B-204ENST00000527836 ADM5C9JUS6 153 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 LBX1P52954 281 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 HUNKP57058 714 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 ZNF280AP59817 542 aaPredicted RBP15.67■□□□□ 0.1
SCN3B-204ENST00000527836 SCARF1Q14162 830 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 MYOZ2Q9NPC6 264 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 PRDM10Q9NQV6 1147 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 CNNM1Q9NRU3 951 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 MYO3BQ8WXR4 1341 aa15.67■□□□□ 0.1
SCN3B-204ENST00000527836 PLIN1O60240 522 aa15.66■□□□□ 0.1
SCN3B-204ENST00000527836 MAP2K2P36507 400 aa15.66■□□□□ 0.1
SCN3B-204ENST00000527836 FOXO4P98177 505 aa15.66■□□□□ 0.1
SCN3B-204ENST00000527836 STRIP1Q5VSL9 837 aa15.66■□□□□ 0.1
SCN3B-204ENST00000527836 ANGEL2Q5VTE6 544 aaKnown RBP15.66■□□□□ 0.1
SCN3B-204ENST00000527836 TTLL5Q6EMB2 1281 aa15.66■□□□□ 0.1
SCN3B-204ENST00000527836 HELBQ8NG08 1087 aaPredicted RBP15.66■□□□□ 0.1
SCN3B-204ENST00000527836 HHIPL1Q96JK4 782 aa15.66■□□□□ 0.1
SCN3B-204ENST00000527836 GBA2Q9HCG7 927 aaPredicted RBP15.66■□□□□ 0.1
SCN3B-204ENST00000527836 ZNF521Q96K83 1311 aa15.66■□□□□ 0.1
SCN3B-204ENST00000527836 AOC2O75106 756 aa15.65■□□□□ 0.1
SCN3B-204ENST00000527836 TAF5LO75529 589 aa15.65■□□□□ 0.1
SCN3B-204ENST00000527836 DLK2Q6UY11 383 aa15.65■□□□□ 0.1
SCN3B-204ENST00000527836 LDHAL6AQ6ZMR3 332 aa15.65■□□□□ 0.1
SCN3B-204ENST00000527836 TXNRD3Q86VQ6 643 aa15.65■□□□□ 0.1
SCN3B-204ENST00000527836 HDAC9Q9UKV0 1011 aa15.65■□□□□ 0.1
SCN3B-204ENST00000527836 ZNF609O15014 1411 aa15.64■□□□□ 0.09
SCN3B-204ENST00000527836 GTF2IP78347 998 aa15.64■□□□□ 0.09
SCN3B-204ENST00000527836 DACT2Q5SW24 774 aa15.64■□□□□ 0.09
SCN3B-204ENST00000527836 ZNF804AQ7Z570 1209 aa15.64■□□□□ 0.09
SCN3B-204ENST00000527836 GMLQ99445 158 aa15.64■□□□□ 0.09
SCN3B-204ENST00000527836 MXD3Q9BW11 206 aa15.64■□□□□ 0.09
SCN3B-204ENST00000527836 ASTN2O75129 1339 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-204ENST00000527836 KLRK1P26718 216 aa15.63■□□□□ 0.09
SCN3B-204ENST00000527836 EPHA10Q5JZY3 1008 aa15.63■□□□□ 0.09
SCN3B-204ENST00000527836 MRPL50Q8N5N7 158 aaKnown RBP15.63■□□□□ 0.09
SCN3B-204ENST00000527836 CDCA5Q96FF9 252 aa15.63■□□□□ 0.09
SCN3B-204ENST00000527836 ZNF594Q96JF6 807 aaPredicted RBP15.63■□□□□ 0.09
SCN3B-204ENST00000527836 PTPRCP08575 1304 aa15.63■□□□□ 0.09
SCN3B-204ENST00000527836 HSPA8P11142 646 aaKnown RBP15.62■□□□□ 0.09
SCN3B-204ENST00000527836 ZNF157P51786 506 aaPredicted RBP15.62■□□□□ 0.09
SCN3B-204ENST00000527836 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
SCN3B-204ENST00000527836 NOGQ13253 232 aa15.62■□□□□ 0.09
SCN3B-204ENST00000527836 RGMBQ6NW40 437 aa15.62■□□□□ 0.09
SCN3B-204ENST00000527836 KIAA0825Q8IV33 1275 aa15.62■□□□□ 0.09
SCN3B-204ENST00000527836 CD209Q9NNX6 404 aa15.62■□□□□ 0.09
SCN3B-204ENST00000527836 PITPNM2Q9BZ72 1349 aa15.62■□□□□ 0.09
SCN3B-204ENST00000527836 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
SCN3B-204ENST00000527836 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
SCN3B-204ENST00000527836 MMP14P50281 582 aa15.61■□□□□ 0.09
SCN3B-204ENST00000527836 TTLL12Q14166 644 aaPredicted RBP15.61■□□□□ 0.09
SCN3B-204ENST00000527836 SSH1Q8WYL5 1049 aa15.61■□□□□ 0.09
SCN3B-204ENST00000527836 CCDC102AQ96A19 550 aa15.61■□□□□ 0.09
SCN3B-204ENST00000527836 SUCLG2Q96I99 432 aa15.61■□□□□ 0.09
SCN3B-204ENST00000527836 SMC4Q9NTJ3 1288 aa15.61■□□□□ 0.09
SCN3B-204ENST00000527836 A0A1B0GUL6 1792 aa15.6■□□□□ 0.09
SCN3B-204ENST00000527836 SNAP23O00161 211 aa15.6■□□□□ 0.09
SCN3B-204ENST00000527836 CA12O43570 354 aa15.6■□□□□ 0.09
SCN3B-204ENST00000527836 NF2P35240 595 aa15.6■□□□□ 0.09
SCN3B-204ENST00000527836 BRPF1P55201 1214 aaPredicted RBP15.6■□□□□ 0.09
SCN3B-204ENST00000527836 NBPF9Q3BBW0 867 aa15.6■□□□□ 0.09
SCN3B-204ENST00000527836 CCER2I3L3R5 266 aa15.59■□□□□ 0.09
SCN3B-204ENST00000527836 WNT10BO00744 389 aa15.59■□□□□ 0.09
SCN3B-204ENST00000527836 SASH1O94885 1247 aa15.59■□□□□ 0.09
SCN3B-204ENST00000527836 CDCA7LQ96GN5 454 aa15.59■□□□□ 0.09
SCN3B-204ENST00000527836 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
SCN3B-204ENST00000527836 TSKSQ9UJT2 592 aa15.59■□□□□ 0.09
SCN3B-204ENST00000527836 SCAF8Q9UPN6 1271 aaKnown RBP15.59■□□□□ 0.09
SCN3B-204ENST00000527836 F8W031 263 aaPredicted RBP15.58■□□□□ 0.08
SCN3B-204ENST00000527836 DLGAP5Q15398 846 aa15.58■□□□□ 0.08
SCN3B-204ENST00000527836 ALDH1L2Q3SY69 923 aa15.58■□□□□ 0.08
SCN3B-204ENST00000527836 C15orf52Q6ZUT6 534 aaKnown RBP15.58■□□□□ 0.08
SCN3B-204ENST00000527836 ZNF646O15015 1829 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-204ENST00000527836 AKAP11Q9UKA4 1901 aa15.57■□□□□ 0.08
SCN3B-204ENST00000527836 MYO1BO43795 1136 aa15.57■□□□□ 0.08
SCN3B-204ENST00000527836 FKBP1BP68106 108 aa15.57■□□□□ 0.08
SCN3B-204ENST00000527836 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
SCN3B-204ENST00000527836 APOBEC3FQ8IUX4 373 aaKnown RBP15.57■□□□□ 0.08
SCN3B-204ENST00000527836 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
SCN3B-204ENST00000527836 IL1R1P14778 569 aa15.56■□□□□ 0.08
SCN3B-204ENST00000527836 HIBADHP31937 336 aaKnown RBP15.56■□□□□ 0.08
SCN3B-204ENST00000527836 RBM5P52756 815 aaKnown RBP eCLIP15.56■□□□□ 0.08
SCN3B-204ENST00000527836 UBE4AQ14139 1066 aa15.56■□□□□ 0.08
SCN3B-204ENST00000527836 METTL24Q5JXM2 366 aa15.56■□□□□ 0.08
SCN3B-204ENST00000527836 PRAMEF18Q5VWM3 479 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms