RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 INHBEP58166 350 aa15.93■□□□□ 0.14
SRPRA-202ENST00000527817 LDLRAD1Q5T700 205 aa15.93■□□□□ 0.14
SRPRA-202ENST00000527817 STRIP1Q5VSL9 837 aa15.93■□□□□ 0.14
SRPRA-202ENST00000527817 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
SRPRA-202ENST00000527817 R3HDMLQ9H3Y0 253 aa15.93■□□□□ 0.14
SRPRA-202ENST00000527817 BSDC1Q9NW68 430 aaPredicted RBP15.93■□□□□ 0.14
SRPRA-202ENST00000527817 MINPP1Q9UNW1 487 aa15.93■□□□□ 0.14
SRPRA-202ENST00000527817 MYO3BQ8WXR4 1341 aa15.93■□□□□ 0.14
SRPRA-202ENST00000527817 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
SRPRA-202ENST00000527817 ALDH1A1P00352 501 aa15.92■□□□□ 0.14
SRPRA-202ENST00000527817 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
SRPRA-202ENST00000527817 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
SRPRA-202ENST00000527817 CCDC85AQ96PX6 553 aaPredicted RBP15.92■□□□□ 0.14
SRPRA-202ENST00000527817 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
SRPRA-202ENST00000527817 MBIPQ9NS73 344 aa15.92■□□□□ 0.14
SRPRA-202ENST00000527817 MKI67P46013 3256 aaKnown RBP15.92■□□□□ 0.14
SRPRA-202ENST00000527817 MKRN3Q13064 507 aaKnown RBP15.91■□□□□ 0.14
SRPRA-202ENST00000527817 SPRYD7Q5W111 196 aa15.91■□□□□ 0.14
SRPRA-202ENST00000527817 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
SRPRA-202ENST00000527817 MXD3Q9BW11 206 aa15.91■□□□□ 0.14
SRPRA-202ENST00000527817 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
SRPRA-202ENST00000527817 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
SRPRA-202ENST00000527817 APOBEC3FQ8IUX4 373 aaKnown RBP15.9■□□□□ 0.14
SRPRA-202ENST00000527817 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
SRPRA-202ENST00000527817 ZBED3Q96IU2 234 aaPredicted RBP15.9■□□□□ 0.14
SRPRA-202ENST00000527817 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
SRPRA-202ENST00000527817 CTSWP56202 376 aa15.89■□□□□ 0.13
SRPRA-202ENST00000527817 HABP4Q5JVS0 413 aaKnown RBP15.89■□□□□ 0.13
SRPRA-202ENST00000527817 TTLL5Q6EMB2 1281 aa15.89■□□□□ 0.13
SRPRA-202ENST00000527817 SLC10A4Q96EP9 437 aa15.89■□□□□ 0.13
SRPRA-202ENST00000527817 CHMP4AQ9BY43 222 aa15.89■□□□□ 0.13
SRPRA-202ENST00000527817 LEMD3Q9Y2U8 911 aa15.89■□□□□ 0.13
SRPRA-202ENST00000527817 KIAA0100Q14667 2235 aaKnown RBP15.88■□□□□ 0.13
SRPRA-202ENST00000527817 MANSC4A6NHS7 340 aaPredicted RBP15.88■□□□□ 0.13
SRPRA-202ENST00000527817 PRKG1Q13976 671 aa15.88■□□□□ 0.13
SRPRA-202ENST00000527817 MAP3K11Q16584 847 aa15.88■□□□□ 0.13
SRPRA-202ENST00000527817 IFNL1Q8IU54 200 aa15.88■□□□□ 0.13
SRPRA-202ENST00000527817 HTTP42858 3142 aa15.88■□□□□ 0.13
SRPRA-202ENST00000527817 UNCXA6NJT0 531 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 SASH1O94885 1247 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 WDR43Q15061 677 aaKnown RBP eCLIP15.87■□□□□ 0.13
SRPRA-202ENST00000527817 OTOP1Q7RTM1 612 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 TXNRD3Q86VQ6 643 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 FBXW7Q969H0 707 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 GREM2Q9H772 168 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 ANGEL1Q9UNK9 670 aaKnown RBP15.87■□□□□ 0.13
SRPRA-202ENST00000527817 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 TRIM17Q9Y577 477 aa15.87■□□□□ 0.13
SRPRA-202ENST00000527817 ELL2O00472 640 aaPredicted RBP15.86■□□□□ 0.13
SRPRA-202ENST00000527817 ZBTB48P10074 688 aaPredicted RBP15.86■□□□□ 0.13
SRPRA-202ENST00000527817 GNAI1P63096 354 aa15.86■□□□□ 0.13
SRPRA-202ENST00000527817 CENPFP49454 3210 aa15.86■□□□□ 0.13
SRPRA-202ENST00000527817 POTEFA5A3E0 1075 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 CCDC30Q5VVM6 783 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 KIAA0825Q8IV33 1275 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 MTMR14Q8NCE2 650 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 DEFB129Q9H1M3 183 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 PTPN22Q9Y2R2 807 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 MAP3K2Q9Y2U5 619 aa15.85■□□□□ 0.13
SRPRA-202ENST00000527817 MYBBP1AQ9BQG0 1328 aaKnown RBP15.85■□□□□ 0.13
SRPRA-202ENST00000527817 PPP1R12BO60237 982 aaPredicted RBP15.84■□□□□ 0.13
SRPRA-202ENST00000527817 CALD1Q05682 793 aaKnown RBP15.84■□□□□ 0.13
SRPRA-202ENST00000527817 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
SRPRA-202ENST00000527817 ERO1AQ96HE7 468 aa15.84■□□□□ 0.13
SRPRA-202ENST00000527817 WNK4Q96J92 1243 aa15.84■□□□□ 0.13
SRPRA-202ENST00000527817 ANKRD2Q9GZV1 360 aa15.84■□□□□ 0.13
SRPRA-202ENST00000527817 ZNF804BA4D1E1 1349 aa15.84■□□□□ 0.13
SRPRA-202ENST00000527817 ZNF646O15015 1829 aaPredicted RBP15.83■□□□□ 0.12
SRPRA-202ENST00000527817 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.12
SRPRA-202ENST00000527817 IGF2BP3O00425 579 aaKnown RBP eCLIP15.83■□□□□ 0.12
SRPRA-202ENST00000527817 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.12
SRPRA-202ENST00000527817 GTF2IP78347 998 aa15.83■□□□□ 0.12
SRPRA-202ENST00000527817 DLGAP5Q15398 846 aa15.83■□□□□ 0.12
SRPRA-202ENST00000527817 OTUD7BQ6GQQ9 843 aa15.83■□□□□ 0.12
SRPRA-202ENST00000527817 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.12
SRPRA-202ENST00000527817 FZD1Q9UP38 647 aa15.83■□□□□ 0.12
SRPRA-202ENST00000527817 PPP2R3BQ9Y5P8 575 aa15.83■□□□□ 0.12
SRPRA-202ENST00000527817 COL1A1P02452 1464 aaPredicted RBP15.83■□□□□ 0.12
SRPRA-202ENST00000527817 H7C1W4 665 aa15.82■□□□□ 0.12
SRPRA-202ENST00000527817 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
SRPRA-202ENST00000527817 SUPT20HL1Q3ZLR7 823 aa15.82■□□□□ 0.12
SRPRA-202ENST00000527817 ARMC5Q96C12 935 aa15.82■□□□□ 0.12
SRPRA-202ENST00000527817 CLMNQ96JQ2 1002 aa15.81■□□□□ 0.12
SRPRA-202ENST00000527817 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
SRPRA-202ENST00000527817 EFCC1Q9HA90 598 aa15.81■□□□□ 0.12
SRPRA-202ENST00000527817 CD209Q9NNX6 404 aa15.81■□□□□ 0.12
SRPRA-202ENST00000527817 TESPA1A2RU30 521 aaPredicted RBP15.8■□□□□ 0.12
SRPRA-202ENST00000527817 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
SRPRA-202ENST00000527817 CSF1RP07333 972 aa15.8■□□□□ 0.12
SRPRA-202ENST00000527817 MPHOSPH8Q99549 860 aa15.8■□□□□ 0.12
SRPRA-202ENST00000527817 MYH3P11055 1940 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 APAF1O14727 1248 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 USP2O75604 605 aaPredicted RBP15.79■□□□□ 0.12
SRPRA-202ENST00000527817 EN2P19622 333 aaPredicted RBP15.79■□□□□ 0.12
SRPRA-202ENST00000527817 ITGA6P23229 1130 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 KLRK1P26718 216 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 IREB2P48200 963 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms