RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 CREBZFQ9NS37 354 aa28.82■■■□□ 2.2
LRRK1-206ENST00000527698 ZNRF3Q9ULT6 936 aa28.82■■■□□ 2.2
LRRK1-206ENST00000527698 PNMA6EA0A0J9YXQ4 647 aa28.81■■■□□ 2.2
LRRK1-206ENST00000527698 PDE8BO95263 885 aa28.81■■■□□ 2.2
LRRK1-206ENST00000527698 EIF6P56537 245 aaKnown RBP28.81■■■□□ 2.2
LRRK1-206ENST00000527698 LRRC24Q50LG9 513 aa28.81■■■□□ 2.2
LRRK1-206ENST00000527698 C1orf115Q9H7X2 142 aa28.81■■■□□ 2.2
LRRK1-206ENST00000527698 CEP126Q9P2H0 1117 aa28.81■■■□□ 2.2
LRRK1-206ENST00000527698 G3BP1Q13283 466 aaKnown RBP eCLIP28.8■■■□□ 2.2
LRRK1-206ENST00000527698 TAF5LO75529 589 aa28.79■■■□□ 2.2
LRRK1-206ENST00000527698 HSPA1AP0DMV8 641 aaKnown RBP28.79■■■□□ 2.2
LRRK1-206ENST00000527698 HSPA1BP0DMV9 641 aaKnown RBP28.79■■■□□ 2.2
LRRK1-206ENST00000527698 ATG9AQ7Z3C6 839 aa28.79■■■□□ 2.2
LRRK1-206ENST00000527698 HELBQ8NG08 1087 aaPredicted RBP28.79■■■□□ 2.2
LRRK1-206ENST00000527698 SIL1Q9H173 461 aa28.79■■■□□ 2.2
LRRK1-206ENST00000527698 RIMBP2O15034 1052 aa28.78■■■□□ 2.2
LRRK1-206ENST00000527698 POTEIP0CG38 1075 aa28.78■■■□□ 2.2
LRRK1-206ENST00000527698 POTEJP0CG39 1038 aa28.78■■■□□ 2.2
LRRK1-206ENST00000527698 HSP90AB4PQ58FF6 505 aa28.78■■■□□ 2.2
LRRK1-206ENST00000527698 PODNQ7Z5L7 613 aa28.78■■■□□ 2.2
LRRK1-206ENST00000527698 PUM3Q15397 648 aaKnown RBP28.77■■■□□ 2.2
LRRK1-206ENST00000527698 LDHDQ86WU2 507 aa28.77■■■□□ 2.2
LRRK1-206ENST00000527698 VGLL2Q8N8G2 317 aa28.77■■■□□ 2.2
LRRK1-206ENST00000527698 COA1Q9GZY4 146 aa28.77■■■□□ 2.2
LRRK1-206ENST00000527698 PA2G4Q9UQ80 394 aaKnown RBP28.77■■■□□ 2.2
LRRK1-206ENST00000527698 TNIP1Q15025 636 aa28.76■■■□□ 2.19
LRRK1-206ENST00000527698 TNS4Q8IZW8 715 aa28.76■■■□□ 2.19
LRRK1-206ENST00000527698 TAF1DQ9H5J8 278 aaPredicted RBP28.76■■■□□ 2.19
LRRK1-206ENST00000527698 AKAP2Q9Y2D5 859 aa28.76■■■□□ 2.19
LRRK1-206ENST00000527698 NOP58Q9Y2X3 529 aaKnown RBP28.76■■■□□ 2.19
LRRK1-206ENST00000527698 ZNF804AQ7Z570 1209 aa28.75■■■□□ 2.19
LRRK1-206ENST00000527698 GPC2Q8N158 579 aa28.75■■■□□ 2.19
LRRK1-206ENST00000527698 PASKQ96RG2 1323 aa28.74■■■□□ 2.19
LRRK1-206ENST00000527698 IFIT1P09914 478 aaKnown RBP28.74■■■□□ 2.19
LRRK1-206ENST00000527698 LPIN2Q92539 896 aa28.74■■■□□ 2.19
LRRK1-206ENST00000527698 ADAMTSL1Q8N6G6 1762 aa28.73■■■□□ 2.19
LRRK1-206ENST00000527698 ECE2O60344 883 aa28.73■■■□□ 2.19
LRRK1-206ENST00000527698 SURF6O75683 361 aaKnown RBP28.73■■■□□ 2.19
LRRK1-206ENST00000527698 CAVIN4Q5BKX8 364 aa28.73■■■□□ 2.19
LRRK1-206ENST00000527698 ERC1Q8IUD2 1116 aa28.73■■■□□ 2.19
LRRK1-206ENST00000527698 CRBNQ96SW2 442 aa28.73■■■□□ 2.19
LRRK1-206ENST00000527698 CENPBP07199 599 aaPredicted RBP28.72■■■□□ 2.19
LRRK1-206ENST00000527698 SLC5A1P13866 664 aa28.72■■■□□ 2.19
LRRK1-206ENST00000527698 OS9Q13438 667 aaPredicted RBP28.72■■■□□ 2.19
LRRK1-206ENST00000527698 ZNF541Q9H0D2 1346 aa28.71■■■□□ 2.19
LRRK1-206ENST00000527698 COL4A5P29400 1685 aa28.71■■■□□ 2.19
LRRK1-206ENST00000527698 CIAPIN1Q6FI81 312 aa28.71■■■□□ 2.19
LRRK1-206ENST00000527698 DBNDD1Q9H9R9 158 aa28.71■■■□□ 2.19
LRRK1-206ENST00000527698 FGFR2P21802 821 aa28.7■■■□□ 2.18
LRRK1-206ENST00000527698 DOK7Q18PE1 504 aa28.7■■■□□ 2.18
LRRK1-206ENST00000527698 GPR101Q96P66 508 aaPredicted RBP28.7■■■□□ 2.18
LRRK1-206ENST00000527698 HACL1Q9UJ83 578 aa28.7■■■□□ 2.18
LRRK1-206ENST00000527698 CXCL9Q07325 125 aa28.69■■■□□ 2.18
LRRK1-206ENST00000527698 VPS37DQ86XT2 251 aa28.69■■■□□ 2.18
LRRK1-206ENST00000527698 GPR108Q9NPR9 543 aa28.69■■■□□ 2.18
LRRK1-206ENST00000527698 MKRN1Q9UHC7 482 aaKnown RBP28.69■■■□□ 2.18
LRRK1-206ENST00000527698 CNTNAP1P78357 1384 aa28.69■■■□□ 2.18
LRRK1-206ENST00000527698 IRS2Q9Y4H2 1338 aa28.69■■■□□ 2.18
LRRK1-206ENST00000527698 WTIPA6NIX2 430 aaPredicted RBP28.68■■■□□ 2.18
LRRK1-206ENST00000527698 HIBADHP31937 336 aaKnown RBP28.68■■■□□ 2.18
LRRK1-206ENST00000527698 ATP2B3Q16720 1220 aa28.68■■■□□ 2.18
LRRK1-206ENST00000527698 PSME4Q14997 1843 aa28.68■■■□□ 2.18
LRRK1-206ENST00000527698 YDJCA8MPS7 323 aa28.67■■■□□ 2.18
LRRK1-206ENST00000527698 ITGBL1O95965 494 aaPredicted RBP28.67■■■□□ 2.18
LRRK1-206ENST00000527698 IL1R1P14778 569 aa28.67■■■□□ 2.18
LRRK1-206ENST00000527698 PNMA8AQ86V59 439 aaPredicted RBP28.67■■■□□ 2.18
LRRK1-206ENST00000527698 TXNRD3Q86VQ6 643 aa28.67■■■□□ 2.18
LRRK1-206ENST00000527698 SIRT2Q8IXJ6 389 aa28.67■■■□□ 2.18
LRRK1-206ENST00000527698 CD209Q9NNX6 404 aa28.67■■■□□ 2.18
LRRK1-206ENST00000527698 RAB11FIP3O75154 756 aa28.66■■■□□ 2.18
LRRK1-206ENST00000527698 EPHX2P34913 555 aa28.66■■■□□ 2.18
LRRK1-206ENST00000527698 TFCP2Q12800 502 aa28.66■■■□□ 2.18
LRRK1-206ENST00000527698 USP17L3A6NCW0 530 aa28.65■■■□□ 2.18
LRRK1-206ENST00000527698 USP17L4A6NCW7 530 aa28.65■■■□□ 2.18
LRRK1-206ENST00000527698 SNAP23O00161 211 aa28.65■■■□□ 2.18
LRRK1-206ENST00000527698 RPS12P25398 132 aaKnown RBP28.65■■■□□ 2.18
LRRK1-206ENST00000527698 MMP14P50281 582 aa28.65■■■□□ 2.18
LRRK1-206ENST00000527698 USP17L1Q7RTZ2 530 aa28.65■■■□□ 2.18
LRRK1-206ENST00000527698 FBXO33Q7Z6M2 555 aa28.65■■■□□ 2.18
LRRK1-206ENST00000527698 FAM84BQ96KN1 310 aaPredicted RBP28.65■■■□□ 2.18
LRRK1-206ENST00000527698 TMEM88BA6NKF7 163 aa28.64■■■□□ 2.18
LRRK1-206ENST00000527698 RAD17O75943 681 aa28.64■■■□□ 2.18
LRRK1-206ENST00000527698 VIL1P09327 827 aaKnown RBP28.64■■■□□ 2.18
LRRK1-206ENST00000527698 KLRK1P26718 216 aa28.64■■■□□ 2.18
LRRK1-206ENST00000527698 EAPPQ56P03 285 aaPredicted RBP28.64■■■□□ 2.18
LRRK1-206ENST00000527698 STRIP1Q5VSL9 837 aa28.64■■■□□ 2.18
LRRK1-206ENST00000527698 GNL3LQ9NVN8 582 aaKnown RBP28.64■■■□□ 2.18
LRRK1-206ENST00000527698 GJA3Q9Y6H8 435 aa28.64■■■□□ 2.18
LRRK1-206ENST00000527698 ZBTB22O15209 634 aa28.63■■■□□ 2.17
LRRK1-206ENST00000527698 SASH1O94885 1247 aa28.63■■■□□ 2.17
LRRK1-206ENST00000527698 DPF2Q92785 391 aa28.63■■■□□ 2.17
LRRK1-206ENST00000527698 MYO3BQ8WXR4 1341 aa28.63■■■□□ 2.17
LRRK1-206ENST00000527698 LMOD1P29536 600 aaPredicted RBP28.62■■■□□ 2.17
LRRK1-206ENST00000527698 KIF1BPQ96EK5 621 aa28.62■■■□□ 2.17
LRRK1-206ENST00000527698 SCN9AQ15858 1988 aa28.62■■■□□ 2.17
LRRK1-206ENST00000527698 ARAP2Q8WZ64 1704 aa28.61■■■□□ 2.17
LRRK1-206ENST00000527698 A0A1B0GUL7 405 aa28.61■■■□□ 2.17
LRRK1-206ENST00000527698 PSMD14O00487 310 aa28.61■■■□□ 2.17
LRRK1-206ENST00000527698 GYG1P46976 350 aa28.61■■■□□ 2.17
LRRK1-206ENST00000527698 TTLL5Q6EMB2 1281 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms