RNA–Protein interactions for RNA: ENST00000527584.5

PUF60-210, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-210ENST00000527584 LAMB2P55268 1798 aa11.38□□□□□ -0.59
PUF60-210ENST00000527584 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
PUF60-210ENST00000527584 USP17L8P0C7I0 530 aa11.37□□□□□ -0.59
PUF60-210ENST00000527584 LACTBP83111 547 aaPredicted RBP11.37□□□□□ -0.59
PUF60-210ENST00000527584 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
PUF60-210ENST00000527584 TEFQ10587 303 aa11.36□□□□□ -0.59
PUF60-210ENST00000527584 GRAPQ13588 217 aa11.36□□□□□ -0.59
PUF60-210ENST00000527584 TMC4Q7Z404 712 aa11.36□□□□□ -0.59
PUF60-210ENST00000527584 ALYREFQ86V81 257 aaKnown RBP11.36□□□□□ -0.59
PUF60-210ENST00000527584 GRAPLQ8TC17 118 aaPredicted RBP11.36□□□□□ -0.59
PUF60-210ENST00000527584 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
PUF60-210ENST00000527584 UBE2OQ9C0C9 1292 aaKnown RBP11.36□□□□□ -0.59
PUF60-210ENST00000527584 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
PUF60-210ENST00000527584 ZMYND8Q9ULU4 1186 aaPredicted RBP11.36□□□□□ -0.59
PUF60-210ENST00000527584 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
PUF60-210ENST00000527584 GPTP24298 496 aa11.35□□□□□ -0.59
PUF60-210ENST00000527584 GRK4P32298 578 aa11.35□□□□□ -0.59
PUF60-210ENST00000527584 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
PUF60-210ENST00000527584 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
PUF60-210ENST00000527584 WNT10BO00744 389 aa11.34□□□□□ -0.59
PUF60-210ENST00000527584 CTGFP29279 349 aa11.34□□□□□ -0.59
PUF60-210ENST00000527584 C1QTNF1Q9BXJ1 281 aa11.34□□□□□ -0.59
PUF60-210ENST00000527584 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
PUF60-210ENST00000527584 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
PUF60-210ENST00000527584 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
PUF60-210ENST00000527584 RIPOR2Q9Y4F9 1068 aa11.34□□□□□ -0.59
PUF60-210ENST00000527584 CEMIPQ8WUJ3 1361 aa11.33□□□□□ -0.6
PUF60-210ENST00000527584 SYN1P17600 705 aa11.33□□□□□ -0.6
PUF60-210ENST00000527584 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.6
PUF60-210ENST00000527584 C7orf61Q8IZ16 206 aa11.33□□□□□ -0.6
PUF60-210ENST00000527584 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
PUF60-210ENST00000527584 FAM205AQ6ZU69 1335 aa11.33□□□□□ -0.6
PUF60-210ENST00000527584 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 TLR2O60603 784 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 KIF22Q14807 665 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
PUF60-210ENST00000527584 PPP1R42Q7Z4L9 355 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 BRI3BPQ8WY22 251 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 TRIM47Q96LD4 638 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 EYA3Q99504 573 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 HCN4Q9Y3Q4 1203 aa11.32□□□□□ -0.6
PUF60-210ENST00000527584 C6orf229H3BNL8 230 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 UBXN2AP68543 259 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 GPSM2P81274 684 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 CDCA8Q53HL2 280 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 TTLL7Q6ZT98 887 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 FAM43AQ8N2R8 423 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 TBC1D16Q8TBP0 767 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
PUF60-210ENST00000527584 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
PUF60-210ENST00000527584 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
PUF60-210ENST00000527584 HMOX1P09601 288 aa11.3□□□□□ -0.6
PUF60-210ENST00000527584 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
PUF60-210ENST00000527584 PARP10Q53GL7 1025 aa11.3□□□□□ -0.6
PUF60-210ENST00000527584 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
PUF60-210ENST00000527584 COL1A1P02452 1464 aaPredicted RBP11.3□□□□□ -0.6
PUF60-210ENST00000527584 GNAT3A8MTJ3 354 aa11.29□□□□□ -0.6
PUF60-210ENST00000527584 PPP1R12BO60237 982 aaPredicted RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 TFRCP02786 760 aaKnown RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 OSBPP22059 807 aa11.29□□□□□ -0.6
PUF60-210ENST00000527584 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
PUF60-210ENST00000527584 RAET1EQ8TD07 263 aa11.29□□□□□ -0.6
PUF60-210ENST00000527584 DIS3LQ8TF46 1054 aaKnown RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 LRFN3Q9BTN0 628 aa11.29□□□□□ -0.6
PUF60-210ENST00000527584 UTP14AQ9BVJ6 771 aaKnown RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 ZC3H12CQ9C0D7 883 aaKnown RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 PAK6Q9NQU5 681 aaPredicted RBP11.29□□□□□ -0.6
PUF60-210ENST00000527584 COL3A1P02461 1466 aaPredicted RBP11.28□□□□□ -0.6
PUF60-210ENST00000527584 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
PUF60-210ENST00000527584 FOSL2P15408 326 aa11.28□□□□□ -0.6
PUF60-210ENST00000527584 HOXD10P28358 340 aa11.28□□□□□ -0.6
PUF60-210ENST00000527584 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
PUF60-210ENST00000527584 ATXN2LQ8WWM7 1075 aaKnown RBP11.28□□□□□ -0.6
PUF60-210ENST00000527584 ZBED3Q96IU2 234 aaPredicted RBP11.28□□□□□ -0.6
PUF60-210ENST00000527584 TTYH1Q9H313 450 aaPredicted RBP11.28□□□□□ -0.6
PUF60-210ENST00000527584 COL4A1P02462 1669 aa11.27□□□□□ -0.6
PUF60-210ENST00000527584 HCLS1P14317 486 aaPredicted RBP11.27□□□□□ -0.61
PUF60-210ENST00000527584 PSMC4P43686 418 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 ANKRD13AQ8IZ07 590 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 ADAMTS19Q8TE59 1207 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
PUF60-210ENST00000527584 OPTNQ96CV9 577 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 DEFB118Q96PH6 123 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 DEFB129Q9H1M3 183 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
PUF60-210ENST00000527584 PODXL2Q9NZ53 605 aa11.27□□□□□ -0.61
PUF60-210ENST00000527584 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
PUF60-210ENST00000527584 CCL15-CCL14A0A0B4J2E2 113 aa11.26□□□□□ -0.61
PUF60-210ENST00000527584 USP17L3A6NCW0 530 aa11.26□□□□□ -0.61
PUF60-210ENST00000527584 USP17L4A6NCW7 530 aa11.26□□□□□ -0.61
PUF60-210ENST00000527584 CCL15Q16663 113 aa11.26□□□□□ -0.61
PUF60-210ENST00000527584 KIF6Q6ZMV9 814 aa11.26□□□□□ -0.61
PUF60-210ENST00000527584 USP17L1Q7RTZ2 530 aa11.26□□□□□ -0.61
PUF60-210ENST00000527584 NGEFQ8N5V2 710 aa11.26□□□□□ -0.61
PUF60-210ENST00000527584 ANKLE1Q8NAG6 615 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms