RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CDC25BP30305 580 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 PREPP48147 710 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 FKBP5Q13451 457 aaPredicted RBP6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 ANKRD34AQ69YU3 496 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 OGFOD2Q6N063 350 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 FAM117BQ6P1L5 589 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 UBASH3BQ8TF42 649 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 RASSF4Q9H2L5 321 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 KCNF1Q9H3M0 494 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 SEC31BQ9NQW1 1179 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 PIM2Q9P1W9 311 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 HIF3AQ9Y2N7 669 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 UBAP1LF5GYI3 381 aa6.08□□□□□ -1.44
CLNS1A-209ENST00000527299 SART1O43290 800 aaKnown RBP6.08□□□□□ -1.44
CLNS1A-209ENST00000527299 BRD2P25440 801 aaKnown RBP6.08□□□□□ -1.44
CLNS1A-209ENST00000527299 LMOD1P29536 600 aaPredicted RBP6.08□□□□□ -1.44
CLNS1A-209ENST00000527299 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
CLNS1A-209ENST00000527299 SCNN1AP37088 669 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 MSMPQ1L6U9 139 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 FAM26DQ5JW98 314 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 CBLL1Q75N03 491 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 FAM200AQ8TCP9 573 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 PIK3R5Q8WYR1 880 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 WNT8BQ93098 351 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 COL26A1Q96A83 441 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 MFSD14AQ96MC6 490 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 ADAM19Q9H013 955 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 SAP130Q9H0E3 1048 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 RNF208Q9H0X6 261 aa6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 SH2B1Q9NRF2 756 aaPredicted RBP6.07□□□□□ -1.44
CLNS1A-209ENST00000527299 A6NJR5 290 aa6.06□□□□□ -1.44
CLNS1A-209ENST00000527299 PTPRAP18433 802 aa6.06□□□□□ -1.44
CLNS1A-209ENST00000527299 PROSER2Q86WR7 435 aaPredicted RBP6.06□□□□□ -1.44
CLNS1A-209ENST00000527299 CEP120Q8N960 986 aa6.06□□□□□ -1.44
CLNS1A-209ENST00000527299 POP1Q99575 1024 aaKnown RBP6.06□□□□□ -1.44
CLNS1A-209ENST00000527299 FAM13BQ9NYF5 915 aa6.06□□□□□ -1.44
CLNS1A-209ENST00000527299 H3BRJ5 948 aa6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 PIP4K2BP78356 416 aa6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 TTC39BQ5VTQ0 682 aaPredicted RBP6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 C16orf46Q6P387 395 aa6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 POU5F2Q8N7G0 328 aa6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 CLUAP1Q96AJ1 413 aa6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 CALR3Q96L12 384 aaKnown RBP6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 OSGEPQ9NPF4 335 aa6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 CCDC39Q9UFE4 941 aa6.05□□□□□ -1.44
CLNS1A-209ENST00000527299 MEGF11A6BM72 1044 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 TNFRSF10BO14763 440 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 PRNPP04156 253 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 F13BP05160 661 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 CYP2E1P05181 493 aaPredicted RBP6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 C8AP07357 584 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 FOSL1P15407 271 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 CPSF6Q16630 551 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 FDX2Q6P4F2 183 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 NFXL1Q6ZNB6 911 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 GIMAP7Q8NHV1 300 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 ASIC4Q96FT7 647 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 RUSC1Q9BVN2 902 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 ZMYND15Q9H091 742 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 ATG3Q9NT62 314 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 ABI2Q9NYB9 513 aaPredicted RBP6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 ANGEL1Q9UNK9 670 aaKnown RBP6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 FNDC3AQ9Y2H6 1198 aaKnown RBP6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
CLNS1A-209ENST00000527299 FAM177BA6PVY3 158 aa6.03□□□□□ -1.44
CLNS1A-209ENST00000527299 MAP4P27816 1152 aaKnown RBP6.03□□□□□ -1.44
CLNS1A-209ENST00000527299 PRIMPOLQ96LW4 560 aa6.03□□□□□ -1.44
CLNS1A-209ENST00000527299 ITGB5P18084 799 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 ZAP70P43403 619 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 NLRP12P59046 1061 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 OCLNQ16625 522 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 SWI5Q1ZZU3 235 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 SGO2Q562F6 1265 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 NCAPG2Q86XI2 1143 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 FBXL18Q96ME1 805 aa6.02□□□□□ -1.45
CLNS1A-209ENST00000527299 NFKBIEO00221 500 aa6.01□□□□□ -1.45
CLNS1A-209ENST00000527299 GAS2O43903 313 aaKnown RBP6.01□□□□□ -1.45
CLNS1A-209ENST00000527299 CABP4P57796 275 aa6.01□□□□□ -1.45
CLNS1A-209ENST00000527299 COL19A1Q14993 1142 aa6.01□□□□□ -1.45
CLNS1A-209ENST00000527299 VSIG10LQ86VR7 867 aa6.01□□□□□ -1.45
CLNS1A-209ENST00000527299 GPR152Q8TDT2 470 aa6.01□□□□□ -1.45
CLNS1A-209ENST00000527299 OSBPL1AQ9BXW6 950 aa6.01□□□□□ -1.45
CLNS1A-209ENST00000527299 JUNBP17275 347 aaPredicted RBP6□□□□□ -1.45
CLNS1A-209ENST00000527299 CFAP70Q5T0N1 1121 aa6□□□□□ -1.45
CLNS1A-209ENST00000527299 FBXL6Q8N531 539 aa6□□□□□ -1.45
CLNS1A-209ENST00000527299 KRTAP4-2Q9BYR5 136 aa6□□□□□ -1.45
CLNS1A-209ENST00000527299 SALL4Q9UJQ4 1053 aa6□□□□□ -1.45
CLNS1A-209ENST00000527299 NOVA2Q9UNW9 492 aaKnown RBP6□□□□□ -1.45
CLNS1A-209ENST00000527299 ACIN1Q9UKV3 1341 aaKnown RBP5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 PRMT3O60678 531 aa5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 TIAF1O95411 115 aa5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 PDE12Q6L8Q7 609 aaKnown RBP5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 TP53INP2Q8IXH6 220 aa5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 SHISA5Q8N114 240 aa5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 SMG8Q8ND04 991 aaKnown RBP5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 SLC7A3Q8WY07 619 aa5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 METTL22Q9BUU2 404 aaPredicted RBP5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 TMPRSS13Q9BYE2 586 aa5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 ELP3Q9H9T3 547 aa5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 TMEM63CQ9P1W3 806 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms