RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 PHLDB3Q6NSJ2 640 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 NGLY1Q96IV0 654 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 SPATA32Q96LK8 384 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 ZBTB42B2RXF5 422 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 DKK1O94907 266 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 SETDB1Q15047 1291 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 CCDC102BQ68D86 513 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 HFE2Q6ZVN8 426 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 CACTIN-AS1Q8N1I8 211 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 ARMC10Q8N2F6 343 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 SHKBP1Q8TBC3 707 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 PLD4Q96BZ4 506 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 FBXL18Q96ME1 805 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
CLNS1A-208ENST00000527265 SEC13P55735 322 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 PKN1Q16512 942 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 ACAD11Q709F0 780 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 CLEC10AQ8IUN9 316 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 TP53INP2Q8IXH6 220 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 MYRFLQ96LU7 910 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 C11orf16Q9NQ32 467 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 ZFATQ9P243 1243 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 SLAIN2Q9P270 581 aa5.69□□□□□ -1.5
CLNS1A-208ENST00000527265 SOWAHDA6NJG2 315 aa5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 M0R2N6 131 aa5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 SART1O43290 800 aaKnown RBP5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 RTN1Q16799 776 aa5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 SWI5Q1ZZU3 235 aa5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 CLP1Q92989 425 aaKnown RBP5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 KCNF1Q9H3M0 494 aa5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 PIM2Q9P1W9 311 aa5.68□□□□□ -1.5
CLNS1A-208ENST00000527265 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 WDR64B1ANS9 1081 aa5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 TARSP26639 723 aaKnown RBP5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 ZC3H6P61129 1189 aaKnown RBP5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 STAG2Q8N3U4 1231 aa5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 FAM83CQ9BQN1 747 aa5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 ATG3Q9NT62 314 aa5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 PPME1Q9Y570 386 aa5.67□□□□□ -1.5
CLNS1A-208ENST00000527265 LGR5O75473 907 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 SASH3O75995 380 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 PSAPP07602 524 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 ATP2B4P23634 1241 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 VAMP1P23763 118 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 SSFA2P28290 1259 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 IDH3AP50213 366 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 ARSDP51689 593 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 BEND4Q6ZU67 534 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 VSIG10LQ86VR7 867 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 TSEN2Q8NCE0 465 aaKnown RBP5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 GAS2L2Q8NHY3 880 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 UBXN4Q92575 508 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 FAM46AQ96IP4 442 aaKnown RBP5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 HINFPQ9BQA5 517 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 POLR3GLQ9BT43 218 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 LEMD3Q9Y2U8 911 aa5.66□□□□□ -1.5
CLNS1A-208ENST00000527265 LOC102724428A0A0B4J2F2 783 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 ANKRD33BA6NCL7 494 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 PRMT3O60678 531 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 RECKO95980 971 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 ITGB5P18084 799 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 CD68P34810 354 aaPredicted RBP5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 SERPINB4P48594 390 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 SIK1P57059 783 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 CBLL1Q75N03 491 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 FAM20CQ8IXL6 584 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 CHMP7Q8WUX9 453 aaPredicted RBP5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 IFT43Q96FT9 208 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 PRIMPOLQ96LW4 560 aa5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 C2orf49Q9BVC5 232 aaPredicted RBP5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 CWC22Q9HCG8 908 aaKnown RBP5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 TLR7Q9NYK1 1049 aaKnown RBP5.65□□□□□ -1.5
CLNS1A-208ENST00000527265 BMP3P12645 472 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 INPP5BP32019 993 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 CPSF6Q16630 551 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 DUOXA2Q1HG44 320 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 NAALADL2Q58DX5 795 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 AGBL5Q8NDL9 886 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 PPP1R1BQ9UD71 204 aaPredicted RBP5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 CCDC39Q9UFE4 941 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 HIF3AQ9Y2N7 669 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 ATAD2Q6PL18 1390 aa5.64□□□□□ -1.51
CLNS1A-208ENST00000527265 FAM177BA6PVY3 158 aa5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 J3QW42 95 aa5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 HOXA10P31260 410 aaPredicted RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 SF3A1Q15459 793 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 OCLNQ16625 522 aa5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 ZNF326Q5BKZ1 582 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 ZNF648Q5T619 568 aaPredicted RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 FAM117BQ6P1L5 589 aa5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 DHX37Q8IY37 1157 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 SCG3Q8WXD2 468 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 NSUN5Q96P11 429 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 OSBPL1AQ9BXW6 950 aa5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 CXXC1Q9P0U4 656 aaPredicted RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 BIN2Q9UBW5 565 aaPredicted RBP5.63□□□□□ -1.51
CLNS1A-208ENST00000527265 DMGDHQ9UI17 866 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms