RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 HOXD8P13378 290 aaPredicted RBP7.09□□□□□ -1.27
CTR9-203ENST00000526874 CEP135Q66GS9 1140 aa7.09□□□□□ -1.27
CTR9-203ENST00000526874 KANK3Q6NY19 840 aa7.09□□□□□ -1.27
CTR9-203ENST00000526874 PI16Q6UXB8 463 aa7.09□□□□□ -1.27
CTR9-203ENST00000526874 LINC00114Q6XXX2 140 aa7.09□□□□□ -1.27
CTR9-203ENST00000526874 ZSCAN29Q8IWY8 852 aaPredicted RBP7.09□□□□□ -1.27
CTR9-203ENST00000526874 FAM9AQ8IZU1 332 aaPredicted RBP7.09□□□□□ -1.27
CTR9-203ENST00000526874 TRIM11Q96F44 468 aa7.09□□□□□ -1.27
CTR9-203ENST00000526874 CSRNP1Q96S65 589 aa7.09□□□□□ -1.27
CTR9-203ENST00000526874 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 LILRB5O75023 590 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 CPNE3O75131 537 aaKnown RBP7.08□□□□□ -1.28
CTR9-203ENST00000526874 AFF1P51825 1210 aaKnown RBP7.08□□□□□ -1.28
CTR9-203ENST00000526874 PLCB3Q01970 1234 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 COL9A3Q14050 684 aaPredicted RBP7.08□□□□□ -1.28
CTR9-203ENST00000526874 DSC3Q14574 896 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 GRIK5Q16478 980 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 PEAR1Q5VY43 1037 aaPredicted RBP7.08□□□□□ -1.28
CTR9-203ENST00000526874 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 CEP120Q8N960 986 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 ZKSCAN3Q9BRR0 538 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 BCL2L13Q9BXK5 485 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 RBSNQ9H1K0 784 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 WWC3Q9ULE0 1092 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
CTR9-203ENST00000526874 P4HBP07237 508 aaKnown RBP7.07□□□□□ -1.28
CTR9-203ENST00000526874 NID1P14543 1247 aa7.07□□□□□ -1.28
CTR9-203ENST00000526874 CDC25BP30305 580 aa7.07□□□□□ -1.28
CTR9-203ENST00000526874 CERS3Q8IU89 383 aa7.07□□□□□ -1.28
CTR9-203ENST00000526874 GIPC2Q8TF65 315 aa7.07□□□□□ -1.28
CTR9-203ENST00000526874 ALKBH8Q96BT7 664 aaKnown RBP7.07□□□□□ -1.28
CTR9-203ENST00000526874 OSMRQ99650 979 aa7.07□□□□□ -1.28
CTR9-203ENST00000526874 METTL12A8MUP2 240 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTR9-203ENST00000526874 TXNDC11Q6PKC3 985 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 DMRTC2Q8IXT2 367 aaPredicted RBP7.06□□□□□ -1.28
CTR9-203ENST00000526874 EPS8L3Q8TE67 593 aaKnown RBP7.06□□□□□ -1.28
CTR9-203ENST00000526874 PMEPA1Q969W9 287 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 CCDC74AQ96AQ1 378 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 POP1Q99575 1024 aaKnown RBP7.06□□□□□ -1.28
CTR9-203ENST00000526874 PLVAPQ9BX97 442 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 PBX4Q9BYU1 374 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 DZANK1Q9NVP4 752 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
CTR9-203ENST00000526874 PPP1R1BQ9UD71 204 aaPredicted RBP7.06□□□□□ -1.28
CTR9-203ENST00000526874 NFKBIEO00221 500 aa7.05□□□□□ -1.28
CTR9-203ENST00000526874 GNB5O14775 395 aa7.05□□□□□ -1.28
CTR9-203ENST00000526874 EDN3P14138 238 aa7.05□□□□□ -1.28
CTR9-203ENST00000526874 ERCC3P19447 782 aa7.05□□□□□ -1.28
CTR9-203ENST00000526874 GALNT12Q8IXK2 581 aa7.05□□□□□ -1.28
CTR9-203ENST00000526874 ANKRD13AQ8IZ07 590 aa7.05□□□□□ -1.28
CTR9-203ENST00000526874 BEND7Q8N7W2 519 aaPredicted RBP7.05□□□□□ -1.28
CTR9-203ENST00000526874 SCARF2Q96GP6 870 aaPredicted RBP7.05□□□□□ -1.28
CTR9-203ENST00000526874 SH2B1Q9NRF2 756 aaPredicted RBP7.05□□□□□ -1.28
CTR9-203ENST00000526874 A0A1W2PP55 124 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 SMNDC1O75940 238 aaKnown RBP eCLIP7.04□□□□□ -1.28
CTR9-203ENST00000526874 NEFLP07196 543 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 COL8A1P27658 744 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 ENOX2Q16206 610 aaKnown RBP7.04□□□□□ -1.28
CTR9-203ENST00000526874 TRAPPC3LQ5T215 181 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 NPAS4Q8IUM7 802 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 IL22RA1Q8N6P7 574 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 ASAP3Q8TDY4 903 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 UBE2Q2Q8WVN8 375 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 UBXN4Q92575 508 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 RNF19AQ9NV58 838 aa7.04□□□□□ -1.28
CTR9-203ENST00000526874 ARID4BQ4LE39 1312 aaPredicted RBP7.03□□□□□ -1.28
CTR9-203ENST00000526874 ANKRD62A6NC57 917 aa7.03□□□□□ -1.28
CTR9-203ENST00000526874 PDE2AO00408 941 aaPredicted RBP7.03□□□□□ -1.28
CTR9-203ENST00000526874 GADD45BO75293 160 aaPredicted RBP7.03□□□□□ -1.28
CTR9-203ENST00000526874 BAG6P46379 1132 aa7.03□□□□□ -1.28
CTR9-203ENST00000526874 ZC3H6P61129 1189 aaKnown RBP7.03□□□□□ -1.28
CTR9-203ENST00000526874 TAGLNQ01995 201 aaKnown RBP7.03□□□□□ -1.28
CTR9-203ENST00000526874 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
CTR9-203ENST00000526874 GIMAP6Q6P9H5 292 aa7.03□□□□□ -1.28
CTR9-203ENST00000526874 WFDC8Q8IUA0 241 aa7.03□□□□□ -1.28
CTR9-203ENST00000526874 DNAJC25Q9H1X3 360 aa7.03□□□□□ -1.28
CTR9-203ENST00000526874 EHD4Q9H223 541 aa7.03□□□□□ -1.28
CTR9-203ENST00000526874 EPHA1P21709 976 aa7.02□□□□□ -1.29
CTR9-203ENST00000526874 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.02□□□□□ -1.29
CTR9-203ENST00000526874 NAALADL2Q58DX5 795 aa7.02□□□□□ -1.29
CTR9-203ENST00000526874 LIN7BQ9HAP6 207 aa7.02□□□□□ -1.29
CTR9-203ENST00000526874 PRDM6Q9NQX0 595 aa7.02□□□□□ -1.29
CTR9-203ENST00000526874 LINC01387J3KSC0 135 aa7.01□□□□□ -1.29
CTR9-203ENST00000526874 LDHBP07195 334 aaKnown RBP7.01□□□□□ -1.29
CTR9-203ENST00000526874 NCLP19338 710 aaKnown RBP7.01□□□□□ -1.29
CTR9-203ENST00000526874 SPRED3Q2MJR0 410 aa7.01□□□□□ -1.29
CTR9-203ENST00000526874 ZNF662Q6ZS27 426 aa7.01□□□□□ -1.29
CTR9-203ENST00000526874 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
CTR9-203ENST00000526874 TTC9Q92623 222 aa7.01□□□□□ -1.29
CTR9-203ENST00000526874 NXPE3Q969Y0 559 aa7.01□□□□□ -1.29
CTR9-203ENST00000526874 HIRIP3Q9BW71 556 aaPredicted RBP7.01□□□□□ -1.29
CTR9-203ENST00000526874 CARD10Q9BWT7 1032 aa7.01□□□□□ -1.29
CTR9-203ENST00000526874 A0A0A0MRY4 1105 aa7□□□□□ -1.29
CTR9-203ENST00000526874 RECKO95980 971 aa7□□□□□ -1.29
CTR9-203ENST00000526874 PTPRAP18433 802 aa7□□□□□ -1.29
CTR9-203ENST00000526874 CDC27P30260 824 aa7□□□□□ -1.29
CTR9-203ENST00000526874 GRIA4P48058 902 aa7□□□□□ -1.29
CTR9-203ENST00000526874 GRM2Q14416 872 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms